Bartonella machadoae: LNM86_08835
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Entry
LNM86_08835 CDS
T08469
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
bmac
Bartonella machadoae
Pathway
bmac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LNM86_08835 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmac03400
]
LNM86_08835 (uvrB)
DNA repair and recombination proteins [BR:
bmac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LNM86_08835 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LNM86_08835 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Kinesin
DUF87
AAA_22
SWI2_SNF2
UB2H
Microtub_bd
eIF3_p135
NACHT
SRP54
Motif
Other DBs
NCBI-ProteinID:
UNE53731
LinkDB
All DBs
Position
1847464..1849752
Genome browser
AA seq
762 aa
AA seq
DB search
MKNGVTATVEALSRLIASGNPLFKNGVLWTPHRPVRPEKSEGGISFQLETSFEPAGDQPK
AIKTLVEGIEKGERTQVLLGVTGSGKTYTMAKIIEKTQRPALILAPNKTLAAQLYGEFKS
FFPHNAVEYFVSYYDYYQPEAYVARSDTYIEKESSINEQIDRMRHAATRAVLERDDVIIV
ASVSCIYGIGSVETYTAMTFTIEKGDRLDQRQLLADLVAQHYRRQDINFIRGSFRVRGDT
IEIFPAHLEDRAWRISLFGDEVETITEFDPLTGQKTGALQSIKIYANSHYVTPRPTLNQA
MKSIKTELIQRLDELNAAGRLLEAQRLEQRTIFDLEMLETTGSCAGIENYSRYLTGRKPG
EPPPTLFEYIPNNALVFIDESHVTIPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRF
EEWDAMRPQTIAVSATPGRWEMEQSHGIFAEQIIRPTGLVDPPTEVRKAKNQVDDVMNEI
HKTIQKGYRTLVTVLTKRMAEDLTEYLHEQGIRVRYMHSDIDTLERIEILRDLRLGTFDV
LIGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADTITG
SIERALQETQRRRQKQIAHNKEHHITPTSIKKNIADILNSGDGNDPIQTNIPDFIEKNKM
VGNNLALHIQHLEKSMHEAAADLNFEEAARLRDEIKHLQKIELAIANDPLPHHSEQSTHE
PMLQQSLFSKPDLNHMGPTIDTGILENRKGKRKSHSPLTKRK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatggtgttacagcaacagttgaggctctttccagactcattgcttcaggaaat
cctctttttaagaatggtgtattatggacacctcaccgccctgttcgtcctgaaaaatct
gaaggtggcatttcctttcaactcgaaacgtcctttgaaccagcaggagatcaacccaaa
gcaattaaaactctggttgaaggaattgaaaagggtgaacgtacacaagtccttttgggc
gttaccggatcggggaaaacctatactatggccaaaatcattgaaaaaacacaacgtccg
gccctgatcttagcgcccaataaaactcttgcagcccaactttacggagaatttaaaagc
ttttttccccacaatgctgtagaatattttgtttcctattatgactactatcagccagaa
gcctatgtggcacgctctgacacttatattgaaaaagaatcctctattaatgaacaaatt
gatcgtatgcgccatgccgcaacacgtgctgtccttgaacgtgatgacgtcattattgtt
gcatctgtatcgtgtatctacgggattggttcggtagaaacctatactgcgatgaccttt
acaatagaaaaaggtgatcggcttgatcaacggcaattattggccgatttagttgcccaa
cattaccgtcgacaagatatcaatttcattcgtggttcctttcgtgttcgaggagataca
attgaaatcttccctgcccacctcgaagatcgtgcttggcgtatttcgctgtttggcgat
gaagtagaaacaattactgaatttgatcctctcacaggtcaaaaaacaggtgctcttcaa
tctattaaaatttatgccaactcacactatgtaacaccacgcccaacactcaatcaagca
atgaaatcaattaaaacagaactcattcaacgcctcgatgaattgaacgcagcggggcgt
cttttagaggcacagcgtttggaacaacgtacaatttttgatttagaaatgttagaaacc
accggctcatgtgcgggaattgaaaattattcacgctatttaacaggacgaaaacccggt
gaaccaccaccaaccttgttcgagtatattccaaacaatgcccttgtttttatcgatgaa
agccatgtaacaattccgcaaattggtggcatgtacagaggtgactttcggagaaaagcg
accttagcagaatatggttttcgccttccctcttgtatggacaatcgtccactacgcttt
gaagaatgggatgccatgcgtccgcaaacgattgccgtctctgcaacaccaggtcgctgg
gaaatggaacaatctcacggcatttttgcggaacaaattattcgcccaacagggcttgtt
gatccaccaacagaagtccgcaaagccaaaaatcaagtagatgatgttatgaatgaaatt
cataaaacaatccaaaaaggctaccgtacactggtaactgtcctcaccaagcgtatggcc
gaggatttaacggaatatctccacgaacaaggtatccgcgtccgctatatgcactccgat
attgatacattagaacgtattgaaattctacgagatcttcggcttggcacttttgatgtc
ttaatcggtatcaatctattgcgagaaggtttagatatcccagaatgtggttttgtcgct
attttagatgccgacaaagagggttttttgcgctcagaaacttctctcatacaaaccatc
ggacgcgcagcacgcaacgtcgatggccgtgttatcctctatgcggatacaatcaccggt
tctatagaacgcgccttgcaggagacacaaagacgtcgacaaaaacaaatcgctcacaac
aaagagcaccatatcacaccgaccagtatcaaaaaaaatatcgcagatattctcaattca
ggcgatggaaacgaccctattcagacaaatattcctgatttcatcgagaaaaacaaaatg
gttggcaacaatttagcactccatattcaacatctcgaaaaatcaatgcatgaagcagct
gctgatcttaactttgaagaagccgcgcgacttcgtgatgaaatcaaacacttacaaaaa
atcgaactagcgattgccaatgatcccttaccacatcatagcgaacaatctacccacgaa
cccatgctacaacaaagccttttttccaaaccagaccttaaccatatgggaccaacgata
gatactggtattttggaaaatcgaaaaggaaaacgaaaatctcattcccctctaacaaag
cgaaaataa
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