Bartonella machadoae: LNM86_12095
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Entry
LNM86_12095 CDS
T08469
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bmac
Bartonella machadoae
Pathway
bmac03030
DNA replication
bmac03410
Base excision repair
bmac03420
Nucleotide excision repair
bmac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LNM86_12095 (polA)
03410 Base excision repair
LNM86_12095 (polA)
03420 Nucleotide excision repair
LNM86_12095 (polA)
03440 Homologous recombination
LNM86_12095 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmac03032
]
LNM86_12095 (polA)
03400 DNA repair and recombination proteins [BR:
bmac03400
]
LNM86_12095 (polA)
Enzymes [BR:
bmac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LNM86_12095 (polA)
DNA replication proteins [BR:
bmac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LNM86_12095 (polA)
DNA repair and recombination proteins [BR:
bmac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LNM86_12095 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LNM86_12095 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
DNA_polI_exo1
HHH_2
ARC6-like_IMS
Motif
Other DBs
NCBI-ProteinID:
UNE54243
LinkDB
All DBs
Position
2543886..2546807
Genome browser
AA seq
973 aa
AA seq
DB search
MKATDHLFLVDGSGYIFRAYYALPPLKRKKDGLPVGAVAGFCNMLWKLLCDARNTATGVV
PTHFAVIFDYSSDTFRKQIYPQYKANRETPPEDLIPQFSLIRQATKAFNLPCIEKEGFEA
DDLIATYAQLATKIGAKTTIISSDKDLMQLVNGHVSLYDGMKDKHIGVSEVVEKWGVTPE
KMVDLQALIGDPTDNIPGIPGIGPKIAAQLLDQFGSLDLLLQRVSEVKQTKRRENIQAYS
EQVQISRELVRLKTDVPINDNLDDFILEPQDGPRLIAFLKAMEFTTLTRRVAEATACNAA
VIDALDIDVEWDNSTQGLNKEQGLDKDIEKAERESLNFSENSPQFLAQTRKDQALTQKIT
RDAYTTILDEEALQEWLSEAQEQGFFAFDTETTSLDPMQAKLVGFSLALQPQKAAYVPLE
HIEGGDDLLGGGRIVEQIETQKALALLKPILENQAVLKIGQNIKYDWLVMKQHGIVIRSF
DDTMLLSYALDAGTLTHNMDDLSQRWLGHKPIAYKDLTYNGKKITSFAQVDLKQATLYAA
EDADVTLRLWQVLNPQLVAQRMTKIYERLDRPLIEVLARMEERGILVDRQILLRLSGELA
QAAFVLEEEIYQLAGEKFNLASPKQLGDILFGKMGLPGGTKTKGGQWSTSAQALEELAAD
GHLLPRKIIDWRQLAKLKSTYTDALPSYILPKTGRIHTNYSLAITSTGRLSSSDPNLQNI
PVRTTEGRKIRAAFIAPKGHMLLSADYSQIELRILAHIANITALKEAFAQGKDIHAITAS
QMFGVAIEDMHSDIRRRAKAINFGIIYGISAFGLANQLGLSRQEASRYIQLYFERFPGIK
DYMEATKEFARQNGYVETIFGRRIHYPEIKAANSQVRAFNERAAINAPIQGSAADIIRRA
MIQMEDALEKEKLSAKMLLQVHDELIFEIPENESEKTMAVVKKVMENATMPVLSLSVPLE
VKVMVAQNWDEAH
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaacagatcatctttttttggttgatggatcgggttatattttccgtgcttac
tatgctttgccgcctttaaagcgcaaaaaggatgggcttcctgtaggagctgtcgctggt
ttttgtaatatgttgtggaaattgctctgtgatgcacgaaatacagctacaggcgttgtt
ccaacgcattttgctgttatttttgattattcatctgatacatttcgcaaacaaatttat
ccacaatataaagcgaatcgagagactcctcctgaagatcttattcctcaattttcttta
atacgccaagcgacaaaggcttttaatttaccttgtattgaaaaggaaggatttgaagcg
gatgatttgattgctacctatgcacaactggcaacaaagattggagcaaaaacaacgatt
atttcttctgacaaagatcttatgcaattggtcaatgggcacgtatccctgtatgatgga
atgaaagataagcatattggtgtttctgaagttgtagaaaaatggggtgttacacctgaa
aaaatggttgatttacaagctttgataggagatccaacagataatatccctggtattcct
ggtattggccccaaaattgcagcccaattgttagatcaatttggtagtcttgatcttttg
ttgcagcgtgtatcagaagttaagcaaacaaaacgacgtgagaatattcaagcctatagt
gagcaggtacagatttctcgtgaattggttcggcttaaaacagatgtgcctatcaacgat
aatttagatgattttattttagaaccgcaagatggtccgcgtttaatcgcttttcttaaa
gctatggaatttacaacattaacacgtcgtgtagcagaggcaacagcatgtaatgcagca
gttattgatgcactcgatatagatgttgagtgggataattctacacaagggttgaacaaa
gaacaaggattggacaaagatattgagaaagctgaaagagaatctcttaatttttctgaa
aactctccacaatttttagcacagacacgtaaagatcaagcgctaactcaaaaaattaca
agggatgcttacacgactattcttgatgaagaagctttgcaagaatggttgtcagaagca
caagagcaaggttttttcgcttttgatactgaaacaacgtcacttgatcctatgcaagca
aagcttgttggtttttcattagcattacagccgcaaaaagcagcctatgttcctcttgaa
cacattgaagggggagatgatcttttagggggagggcgtatcgttgaacagattgaaaca
caaaaagctttagcacttttaaaaccgatattagagaatcaagcagtgttaaaaattggt
cagaatataaagtatgattggttggtgatgaaacaacatggcattgtgatacgctcgttt
gatgacaccatgcttttgtcatatgctttagatgctggaactttaacacataatatggat
gatttatcgcagcgttggcttggacataaaccgattgcttacaaggatttaacatataat
gggaaaaaaattacttcttttgcacaagtagatttaaaacaggcaaccctttatgctgct
gaggatgctgatgtaacgcttcgtttatggcaagttttaaatccacagcttgtagcgcaa
agaatgacaaaaatttatgaacggcttgatcgtccactgatagaagttcttgctagaatg
gaagaacgtgggattctggttgataggcagattttattgcgtctttcaggagaattagcc
caagctgcttttgttctagaagaagaaatatatcagttagctggtgaaaagtttaatctt
gcctcaccaaaacaattaggtgatatcctctttggcaagatgggtttgcctggaggcact
aaaaccaaaggtggtcaatggtcgacctctgctcaagccttggaagaattggctgctgat
ggtcatcttttgccccgtaaaattattgattggcgtcaacttgcaaaactaaaatctact
tatacagatgctttgccttcttacattttgcccaaaacagggcgtattcatacgaattat
tctttagcaataacatcaacgggacgtttatcatcatcggaccctaatttacaaaatatt
ccagtacgaacaacagaaggacggaaaatacgagcagcttttattgctccaaaagggcat
atgctcctatcggctgattatagccagattgaattgcgtattcttgcccatatagccaac
attacggcattaaaagaagcttttgcacaaggtaaggatattcacgctattacagcatcg
cagatgtttggtgttgcgatagaggatatgcattcagatatacgcagacgtgcaaaagcg
attaattttggcattatttatggtatttcagcttttggtttagccaatcagttgggactt
tcgcgacaagaagcaagtcgttatattcaactttattttgaacggtttccaggcattaaa
gactatatggaggcgacgaaagaatttgcgcgtcaaaatggttatgtagaaacaattttt
ggacgacgtatccattatccagaaataaaagcagcgaactcacaggtgcgtgcttttaat
gaacgggcagctatcaatgcaccgattcaaggatcagcggcagatattattcgccgtgcc
atgattcaaatggaagatgctttggaaaaagaaaaactgtcagcaaaaatgttgctacag
gtacatgatgaattgatttttgaaataccggaaaatgagagtgaaaaaaccatggctgtt
gttaaaaaagttatggaaaatgctacaatgccggtcctttctttgtctgtaccacttgaa
gtaaaggtaatggttgcacaaaattgggatgaagcacattaa
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