Bartonella machadoae: LNM86_12270
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Entry
LNM86_12270 CDS
T08469
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bmac
Bartonella machadoae
Brite
KEGG Orthology (KO) [BR:
bmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmac03032
]
LNM86_12270 (gyrB)
03400 DNA repair and recombination proteins [BR:
bmac03400
]
LNM86_12270 (gyrB)
Enzymes [BR:
bmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LNM86_12270 (gyrB)
DNA replication proteins [BR:
bmac03032
]
Prokaryotic type
DNA Topoisomerases
LNM86_12270 (gyrB)
DNA repair and recombination proteins [BR:
bmac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LNM86_12270 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
HATPase_c_3
Toprim_4
DUF4907
Motif
Other DBs
NCBI-ProteinID:
UNE54273
LinkDB
All DBs
Position
complement(2590796..2593228)
Genome browser
AA seq
810 aa
AA seq
DB search
MSDETTSPIQNGDYDAASIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEA
LAGHATLVNVTLHADGSCSVRDNGRGIPTDIHPTEGISAAEVIMTQLHAGGKFDQNSYKV
SGGLHGVGVSVVNALSVWLKLQIKRNGKIHQMSFTHGVADSPLSVIGDCDAESGTEIRFL
PSSETFTMVEFDFETLERRLRELAFLNSGIHILLVDERHADIQSVELHYEGGLIEFVKYI
DQTKKSLLDTPIYIANEKDGMSVDVALWWNDSYHEKVLCFTNNIPQRDGGTHLIGFRSAL
TRQINGYAESSGIAKKEKVNLTGDDCREGLTAILSVKVPDPKFSSQTKDKLVSSEVRPIV
ENLVNEGLSVWLEEHPNEAKLLIGKVVEAATAREAARKARELTRRKGALDITSLPGKLAD
CQERDPAKSEIFIVEGDSAGGSAKSGRSRQNQAILPLRGKILNVERARFDRMLSSDMIGT
LITALGTSIGKDEFSPDKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHLYI
AQPPLYKVSRGKSSQYIKNETAFEEFLINAGLEEATLELSTGEMRAGADLRQLAEDARML
RQLLNGLHTRYDRTVVEQAAIVGAFNLETFATPEKAQKTADTVAKRLDLIADDIERGWSG
QYRQDGSLCFERILRGVKDVITLDAGLINSTDARQIDRVSKSFIEIYNPPPLLHRKDKSE
RILGPMGLLESIFTNGKKGITLQRYKGLGEMNAEQLWETTLDPEARSLLQVKINDATDAD
SLFSRLMGDEVEPRRIFIQDNALSVANLDI
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgaaacaacctcaccgatacagaatggtgattatgatgccgcttccatcaaa
gttctcaaaggtcttgatgctgtacgtaaacgtcctggtatgtatattggcgatacagat
gatggttcaggcttacaccatatggtctatgaggttgtggacaatgctattgacgaagct
ttagccggtcatgctacccttgtaaatgtcactctccatgctgatggctcttgctctgtt
cgcgataatggacgcggaattccaaccgatatccatccgacagagggcatttcagcagct
gaagttatcatgacacagctccatgcagggggaaagtttgatcaaaactcttataaagtt
tcaggtgggttgcacggcgttggtgtctctgttgtgaatgcattatctgtttggctcaaa
ttgcagattaaacgcaatggtaaaattcaccaaatgtcatttacgcacggcgttgctgat
tctcctttaagcgttattggcgattgtgatgcagaaagtggaacggaaattagattttta
ccaagttctgaaacctttacaatggttgaatttgattttgaaactttggaacgtcgtttg
cgtgaactcgcttttttaaattctggtatccatattcttctcgttgacgaacgtcatgct
gacattcaatccgttgagcttcattatgaaggtgggttaattgaatttgtcaaatatatt
gatcaaacgaaaaaatcattgttggatacccctatctacattgccaatgaaaaggatggg
atgagtgttgacgttgccctatggtggaatgattcctatcatgaaaaagtgttatgtttt
acaaataatattcctcaacgtgatggtggaacccacttaataggtttccgtagtgcttta
acgcgccaaattaatggttatgctgaatcttcaggcattgcaaagaaagaaaaagtgaac
ttaaccggtgatgattgtcgtgaaggacttacagctattctttcggtcaaagttcctgat
ccaaaattttcttctcagacaaaagataagttggtttcttctgaagtgcgtcctattgtt
gaaaatttagtcaatgaaggtctttccgtatggttagaagagcatcctaatgaagcaaaa
ttgctgattggtaaagtggtagaagctgcaacagcgcgtgaagcagcacgtaaagcacgt
gaactcacaagacgaaaaggcgctcttgatatcacttctctaccgggaaagcttgccgat
tgccaagaacgtgatccagcaaaatcagaaatttttatcgttgagggagattctgctggt
ggttcagcaaaaagtggacgctctcgtcagaatcaagcgattttgcctttgcgtggtaaa
attctcaatgtcgagcgagcacgtttcgaccggatgctttcatcagatatgattggaact
cttattactgctcttggaacttccattggtaaagatgaattttcaccagataaattgcgt
tatcataaaatcatcattatgacagatgctgatgttgatggtgcacatattcgcacactt
ttgcttaccttctttttcagacaaatgcctgaattgattgaacggggacatctttatatc
gctcaaccgcccctttataaagtatcgcgcgggaaatcttcccaatatattaaaaatgag
acagcattcgaggaatttttaatcaatgctggattggaagaagcaactctagaattgtca
acaggtgagatgcgcgcaggagctgatttgcgccaactcgctgaagatgcgcgtatgtta
cgccaacttttaaatggtcttcatacacgctatgaccgcacagttgtagaacaagcagca
attgttggggcttttaatcttgaaacttttgcaacaccagaaaaagcacaaaaaacagcc
gatacagttgcaaaacgccttgatttaatcgctgatgatatagaacgtggttggagcggt
caatacagacaagatggaagtttatgttttgaacgtattttacgtggcgtgaaagatgtt
attactttggatgcaggactgatcaattcaacggatgcgcgtcaaatcgatcgtgtttct
aaaagtttcatagaaatatataaccctccaccactcctacaccgcaaagataaatcagaa
cgtattttggggcctatgggtttattggaaagtatttttacaaacggtaaaaaaggtatc
acgctccaacgttataaaggtcttggagaaatgaatgctgaacagctttgggaaacaacc
cttgatcctgaagcgcgctctcttttacaagttaaaatcaatgacgcaacggatgctgat
tcactcttttctcgtttaatgggcgatgaagttgaaccgagacgaatttttattcaagat
aatgctttgagcgttgccaatcttgatatctaa
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