Burkholderia mallei 6: DM78_1224
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Entry
DM78_1224 CDS
T03489
Name
(GenBank) FAD binding domain of DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bmae
Burkholderia mallei 6
Brite
KEGG Orthology (KO) [BR:
bmae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmae03400
]
DM78_1224
Enzymes [BR:
bmae01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DM78_1224
DNA repair and recombination proteins [BR:
bmae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DM78_1224
Prokaryotic type
DM78_1224
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
LPD1
Motif
Other DBs
NCBI-ProteinID:
AIO59658
LinkDB
All DBs
Position
1:1316482..1317942
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AA seq
486 aa
AA seq
DB search
MSSSISIAPAVVWFCDDLRVSDHPALMRAAESGRPVIGVYVFDERAGGRPLGGAARWWLH
GSLRALGAALAALGGTLALLRGDEHDTIVSFAAALGAGAVYWSRRYALAARAVDNAVQTA
LDAQGIAVETFNASLLFEPGDLVNADGRPYQVFSAYWRAAMRRGVPAPPLGAPRRLNGGA
LPAALARQCVALDALGLEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDR
PGIASTSRLSPYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHH
FPDLPRRNLRHTLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCA
SFLVKHLLIDWRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKF
DPDGAYVRRWVPELAGLPPATIHEPWAAPGAQLAAAGVRLGETYPLPIVAYDAARRRALD
AFGAIR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttcatccatctcgattgcgcccgccgtcgtctggttttgcgacgatctgcgcgtg
tccgatcatcccgcgctcatgcgcgccgccgagtcggggcgccccgtgatcggcgtctac
gtgttcgacgagcgcgccggcgggcggccgctgggcggcgcggcgcgctggtggctgcac
ggctcgttgcgcgcgctcggcgcggcgctcgccgcgctgggcggcacgctcgcgctgctg
cgcggtgacgagcacgatacgatcgtttcgttcgccgcggcgctcggcgcgggcgccgtc
tactggagccgccgctatgcgcttgccgcgcgcgcggtcgacaacgcggtgcagacggcg
ctcgacgcgcagggcatcgcggtcgagacgttcaacgcgagcctgctgttcgagccgggc
gacctcgtcaacgcggacggccgcccgtatcaggtgttcagcgcgtactggcgcgcggcg
atgcgccgcggcgtgccggcaccgccgctcggcgcgccgcggcgcctgaacggcggcgcg
ctgccggcggcgctcgcgcggcagtgcgtggcgctcgacgcgctcgggctcgagccgacg
ggcccggactgggcgggcggcctgcgcgacgcatggcgtttcggcgaggacgccgcgcac
cgtcggctgcgcgccttcgtcgacagccggctcggcggctatgcggccgagcgcgaccgg
ccgggcatcgcgtcgacgagccggctgtcgccgtacgtgcgcttcggcaacctgtcggcg
cggcagctctggcatgcggccgccgacgcgtacgcgcacggcgcggcgacccaggcggac
ctcgacaagtttctgagcgagctcggctggcgggagttcggctggacccagttgcaccac
tttccggacctgccgcgccgcaacctgcgccacacgctcgacggcatgccgtggcgggac
gatcccgccgcgcttgcagcatggcggcgcggcgccacgggctatccgttcgtcgacgcc
ggcatgcgcgagctctgggcgacgggctggatgcacaaccgcgtgcggatggtatgcgct
tcgtttctcgtcaagcacttgctgatcgactggcgggcgggcgaggcgtggttctgggac
acgctcgtcgacgcggacgcggcgtcgaacgccgcgaactggcagtgggtcgcgggctgc
ggcgcggatgccgcgccgtatttccggatcttcaatccggtcgcgcagggccggaagttc
gatccggacggcgcctatgtgcggcgctgggtgcccgagctggccggcctgccgcccgcg
acgatccacgagccgtgggcggcgcccggcgcgcagctcgccgcggcaggcgtgcggctc
ggcgagacttatccgctgccgatcgtcgcgtacgatgccgcgcgccggcgagcgctcgac
gcattcggggcaatcagatga
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