KEGG   Burkholderia mallei 6: DM78_1611
Entry
DM78_1611         CDS       T03489                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
bmae  Burkholderia mallei 6
Brite
KEGG Orthology (KO) [BR:bmae00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bmae03016]
    DM78_1611 (truB)
Enzymes [BR:bmae01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     DM78_1611 (truB)
Transfer RNA biogenesis [BR:bmae03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    DM78_1611 (truB)
 Prokaryotic type
    DM78_1611 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2 PUA_3 UPF0113
Other DBs
NCBI-ProteinID: AIO59656
LinkDB
Position
1:complement(1779593..1780501)
AA seq 302 aa
MARRALDGVLLLDKPVGLSSNDALMRAKRLYQAKKAGHTGTLDPLASGLLPLCFGEATKF
SQDLLEADKTYEATMRLGVRTTTGDAEGDVLDTRDVSCDEAAVRAALARFVGEIVQVPPM
YSALKRDGKPLYEYARAGQTVEREGRTVTIRALALVSCALPDVTFRVTCSKGTYVRTLAE
DIGEALGCGAHLTMLRRTGVGPLTLEHAVTLDALDAATQDERDARLAPVDALLSTFPCVK
LDAALATRFLHGQRLKLSELAARPDAAEGGRVRVYDADDRLLGVARASEGVLAPERLVVT
GA
NT seq 909 nt   +upstreamnt  +downstreamnt
atggcccgccgcgcgctcgatggcgtgctgctgctcgacaagccggtcggcctgtcgagc
aacgacgcgctgatgcgcgcgaagcgcctgtatcaggcgaagaaggcgggccacacgggc
acgctcgatccgctcgcgtcgggactgctgccgctttgcttcggcgaagcgacgaagttc
tcgcaggacctgctcgaagccgacaagacctatgaagcgacgatgcggctcggcgtgcgc
acgacgacgggcgacgccgaaggcgacgtgctcgacacgcgcgacgtgagctgcgacgaa
gcggcggtccgcgcggcgctcgcgcgcttcgtcggcgagatcgtgcaagtgccgccgatg
tactcggcgctcaagcgcgacggcaagccgctttacgaatacgcgcgcgccggccagacg
gtcgagcgcgaagggcgcaccgtgacgatccgcgcgctcgcgctcgtgtcgtgcgcgttg
cccgacgtcacgtttcgcgtgacgtgcagcaagggcacgtacgtgcgcacgctcgccgag
gatatcggcgaagcgctcggttgcggcgcgcatctgacgatgttgcggcgcaccggggtc
ggcccgctgacgctcgagcacgcggtgacgctcgatgcgctcgacgccgcgacgcaggac
gagcgcgacgcgcggctcgcgcccgtcgatgcattgctgtcgacgtttccgtgcgtgaag
ctcgatgcggcgctcgcgacgcgctttctgcacggccagcggctgaagctctccgagctt
gcggcgcggcccgacgcggccgaaggtgggcgcgtgcgcgtctacgatgccgatgaccgg
ctgctcggcgtcgcgcgcgcgtcggaaggcgtgctcgcgccggagcggctcgtcgtgacg
ggcgcgtga

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