Burkholderia mallei 6: DM78_489
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Entry
DM78_489 CDS
T03489
Name
(GenBank) RHS repeat-associated core domain protein
Organism
bmae
Burkholderia mallei 6
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TcdB_toxin_midN
RHS_repeat
FG-GAP_3
FG-GAP
DUF6443
Motif
Other DBs
NCBI-ProteinID:
AIO56983
LinkDB
All DBs
Position
1:complement(538800..544325)
Genome browser
AA seq
1841 aa
AA seq
DB search
MPQAIAWGTYRLDFVYEARPDVLVDGSYGAPVTLDKRCARIELHATTEAPSLVRSWTLLY
DDDGGRGRSLLATIREQGHAADGSILAAPERTFAYSSPGAPALVPVTGWTTPLSDPNTDL
VDLNGDGLPDIVHLGHGMPTMHPNLGGGQFGAPRPLARTAAPLRLSAPSVAFADMSGNGS
VDVLVLDAPFSGYYPLAAPGGSAPAGFGRPIVFERAPAVSPSDVRLRFVDLNGDGITDIL
LDTGRGWLAYLRDGPASWSDAPRVLPPARTPPVSLADPHVHLADMTGDGLMDIVRVTGGG
LTYWPARADGGWDAAIAMTPSPAFGRDFDPHRLALYDVDGDGCADLVYVGLQSVTLWRNV
GATRLAAPVAIPGTPVALPGSYRIVDLLGSGTAGVHFQLPSIAGASRQSYLDLGGGVKPY
LLTDLAHGAAQSTHIGYRTSTEYARDDAHAGAPWRTYHPFPIQCVARTDQTDHGTGATTS
TRYAYHDARYDPATRTFLGFGRVDSEQLGDASCPTLRVETTFHLGLDPADPARPLTGDEA
LKLGALRRKPLVTATYGLDGSPLERRPYSITRHAYDALLVASTADNGKRIAVPYCTTSTE
ERWERQSAAVSARTVDYLAITSEGDVTSQRTRAQRAGIAAPDQDVTTTTTLATGGKNLRL
PARVTQTAPGGDIVSESICFYDGDAFAGLPEGQATRGLVTRIEDRVFDDAFVASVWGDTP
PDLTQYGYHRLPGEAGSWWKTRRAHARGANASGPTLATKGPLGALQTLQYDASGQRVVKV
IDALGNAVAATTDARVFQTASLTDANGHRTADAFDALGRVVATIGPLDTPALPTIAFTYT
VGAISTVTSATRGTHGGADAVPALTWIDGTGNVLGKGTPAAAPGEWTVTHAVRRNARGLV
AASFLPYAATGANWQPPPADTGATTSTYNALGRLVQLTRPDGLVVTSRREGDTLITSETW
PGGAALDVERQVYDAAGQLVSVSRNAGDHWVEQRYAYAPSGKVRDVTLPGGAHVAFTLDL
LGRVFAQQSPDTGRTVFLLDASDNQRARTNAAGQIVRTEVDAMNRATNVYHDAEPAPRVR
YEYADASGAPPADGIVANRYTRLWRITDEIGTVDFEYDEAGRKTATTRTVAATGQRFVTR
RAYDALGRLARATLPASAPGGAARTIAYGYAADGRLVSASGVVKDAAYDRFGRLTSIDYE
NGASTLIDYAANAGGIARVRVLDAARNVLRDTTLTRGGGLVQTLTSAHAGDDSVDFGYDP
LRRLTSAHYRQGATAADAHDWTFDDAFNATAATDAGVLTYEPGTHRLASVGGAAVAFDAA
GRMTSGRFGAATFDAADHLSAVTLPDATHIAHTYDYQGRRVRSTKNGAQTYFSPIEDIEF
QGDTAIVWITFGRQRIAADIGGALTFVHPNALGVMDLITDSGGAYGTRVRQTPFGYARAA
DGAAPAGGVAAVALALGAADATGLVCHGLRWYDPRVGQFISPDPVVTSVYTVGAWNPYVY
CLGNPILLADPNGCSFLSVLEIIGVAILAAACVVGAIFTGGATLVALGVLSANIGGWLLA
GVALGSLGGAIAGELAAQKAGGNLWAGAFLGAFLGGATSLIGGAAAAGIDTLIGGTKTFL
SFVAAGAIQGTLAGAGTGLAIGYAGGKGNAESMLIAMAKGAAWGAVLGTLLGAGIGAIAG
TGISGAAKPDNFLNIGAFGQKFADFTSTSTAINSADNAAGVTESLAQLSMPNGFNAGNLL
GLLPNLVTTNEQAAGWFSIPIGWLGPGVLNDAGFAGLVDTSMALDQAGFSYAHQISLLLG
AAPYFIDYAATMAQIVDANGVNNFEMAFNNAFGSGSPSNTG
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcaggcgatcgcatggggcacgtatcggctcgacttcgtgtacgaggcgcggccc
gacgtgctcgtcgacggcagctacggcgcgcccgtcacgctcgacaagcgctgcgcccgc
atcgagctgcacgcgacgaccgaggcgcccagcctcgtgcgcagctggacgctgctgtac
gacgacgacggcggccgcggccgctcgctgctcgcgacgatccgcgaacaaggccacgcg
gccgacggctcgatcctcgccgcgcccgagcgcacgttcgcgtactcgtcgcccggcgcg
cccgcgctcgtgccggtaacgggctggacgacgccgctgtcggacccgaacaccgatctc
gtcgacctgaacggcgacgggctgcccgacatcgtgcaccttggccatggcatgccgacg
atgcatccgaacctcggcggcggacagttcggcgcgccgcgcccgctcgcgcgcaccgcc
gccccgctgcggctgtccgcgccctcggtcgcgttcgcggacatgtcgggcaacggcagc
gtcgacgtgctcgtgctcgacgcgccgttctccggctactacccgctggccgcgccgggc
ggctcggcgcccgcgggcttcggccggccgatcgtgttcgagcgcgcgcccgccgtctcg
ccgagcgacgtgcggctgcgcttcgtcgatctgaacggcgacggcatcacggacatcctg
ctcgacaccggccgcggctggctcgcgtatctgcgcgacggcccggcgagctggtccgac
gcgccgcgcgtgctgccgcccgcgcgcacgccgcccgtgtcgctcgccgatccgcacgtg
catctcgccgacatgacgggcgacgggctgatggacatcgtgcgcgtgacgggcggcggg
ctcacgtactggcccgcgcgcgcggacggcggctgggacgcggcgatcgcgatgacgcct
tcgcccgcgttcgggcgcgatttcgatccgcaccggctcgcgctgtacgacgtcgacggc
gacggctgcgcggatctcgtctacgtcggcctgcaatccgtcacgctgtggcgcaacgtc
ggcgcgacgcggctcgccgcgcccgtggcgattcccggcacgccggtcgcgctgccgggc
agctaccggatcgtcgatctgctcggctcgggcacggcgggcgtgcatttccaactgccg
tcgatcgcgggcgcgtcgcgccagagctatctcgatctcggcggcggcgtgaagccgtat
ctgctgaccgatctcgcgcacggcgcggcgcaaagcacgcatatcggctaccgcacgagc
accgagtacgcgcgcgacgatgcgcatgccggcgcgccgtggcgaacctatcatccgttt
ccgatccagtgcgtcgcgcgcaccgaccagaccgaccacggcaccggcgcgacgacgtcg
acccgctacgcgtatcacgacgcgcgctacgatcccgcgacgcgcacgttcctcggcttc
ggccgcgtcgacagcgagcaactgggcgacgcatcgtgcccgacgctgcgcgtcgagacg
accttccacctcgggctcgatccggccgacccggcccgcccgctgacgggcgacgaagcg
ctgaagctcggcgcgctgcgccgcaagccgctcgtcaccgcgacgtacgggctcgacggc
tcgccgctcgagcgccgcccgtattcaatcacgcggcacgcgtacgacgcgctgctcgtc
gcgtcgacggcggataacggcaagcggatcgcggtgccgtactgcacgacgtcgaccgag
gagcgctgggaacggcagagcgccgccgtatcggcacgcaccgtcgactatctcgcgatc
acgagcgaaggcgacgtcacgtcgcaacgcacgcgcgcgcagcgcgccggcatcgccgcg
cccgaccaggacgtgacgacgacgacgacgctcgccacgggcggcaagaacctgagactg
ccggcacgcgtcacgcagaccgcgcccggcggggacatcgtgtccgaatcgatctgcttc
tacgatggcgacgcgttcgccggcttgcccgaaggccaggcgacgcgcgggctcgtcacc
cgcatcgaagatcgcgtgttcgacgacgcgttcgtcgcgtcggtctggggcgacaccccg
cccgacctcacgcagtacggctaccaccggctgccgggcgaagcgggcagttggtggaag
acccggcgcgcgcacgcgcgcggcgcgaacgcgagcgggccgacgctcgcgacgaaaggc
ccgctcggcgcgctgcagacgctgcaatacgacgcgagcggccagcgcgtcgtcaaggtg
atcgacgcgctcggcaacgcggtggcggccaccaccgatgcgcgcgtgttccagaccgcc
tcgctcaccgacgcgaacggccaccggacggccgacgcgttcgacgcgctcggccgcgtc
gtcgcgacgatcggcccgctcgacacgcccgcgctgccgacgatcgcgttcacgtacacg
gtgggcgcgatctcgaccgtcacgagcgcgacgcgcggcacgcacggcggcgcggacgcg
gtgccggcgctcacgtggatcgacggcaccggcaacgtgctcggcaagggcacgcccgcc
gccgcgcccggcgagtggaccgtcacccacgcggtgcggcgcaacgcgcgcggcctcgtc
gccgcctcgttcctgccgtacgcggcgacgggcgcaaactggcagccgccgcccgcggac
accggcgcgacgacgtcgacctacaacgcgctcggccggctcgtgcagctcacgcggccg
gacgggctcgtcgtcacgagccgccgcgaaggcgacacgctgatcacgagcgaaacctgg
ccgggcggcgccgcgctcgacgtcgagcggcaggtgtacgacgcggcgggccagctcgta
tcggtctcgcgcaacgcgggcgatcactgggtcgagcagcgctacgcgtacgcaccgtcg
ggcaaggtccgcgacgtgacgctgccgggcggcgcgcacgtcgcgttcacgctcgacctg
ctcggccgcgtgttcgcgcagcaaagccccgacacgggccgcaccgtgttcctcctcgac
gcatcggacaaccagcgcgcgcgcacgaacgcggcgggccagatcgtgcgcaccgaagtc
gacgcgatgaaccgcgcgacgaacgtgtatcacgacgcggagccggcgccgcgcgtgcgc
tacgagtacgccgacgcgagcggcgcgccgcccgcggacggcatcgtcgcgaatcgctac
acgcgcctctggcggatcaccgacgagatcggcacggtcgacttcgaatacgacgaagcc
ggccgcaagaccgcgacgacgcgcaccgtcgcggccaccgggcagcgcttcgtcacgcgg
cgcgcatacgacgcgctcggccgcctcgcgcgcgcgacgctgcccgcgagcgcgccgggc
ggcgccgcacgcacgatcgcctacggctatgcggccgacggacggctcgtcagcgcatcg
ggcgtcgtgaaggacgcggcctatgatcggttcggacgcctgacctcgatcgactacgag
aacggcgcgtcgacgctgatcgactacgcggcgaacgccggcggcatcgcacgcgtgcgc
gtgctcgacgccgcgcgcaacgtgctgcgcgacacgacgctcacccgcggcggcggcctc
gtgcaaacgctcacgagcgcgcacgccggcgacgacagcgtcgacttcggctacgacccg
ctgcgccgcctgacaagcgcgcactaccggcaaggcgcgacggccgccgatgcgcatgac
tggaccttcgacgacgcattcaacgcgacggccgccaccgatgcgggcgtgctgacgtac
gagccgggcacgcaccggctcgcgtcggttggcggcgcggcggtggcgttcgatgccgcc
ggccggatgacgagcgggcgcttcggcgcggcgacgttcgacgcggccgatcacctgagc
gccgtcacgctgccggacgcgacgcacatcgcgcacacgtacgactaccagggccgccgc
gtgcgctcgacgaagaacggcgcgcagacgtatttcagcccgatcgaagacatcgagttc
cagggcgacacggcgatcgtgtggatcacgttcggcagacagcggatcgcggccgacatc
ggcggcgcgctgacgttcgtgcatccgaacgcgctcggcgtgatggatctcatcaccgat
tcgggcggcgcatacggcacgcgcgtgcggcagacaccgttcggctacgcgcgagcggcc
gacggcgcggcgccggcgggcggcgtcgcggcggtggcgctcgcgctgggcgcggcggac
gcgacgggcctcgtatgccacggcctgcgatggtacgacccgcgcgtcggccagttcatc
agcccggacccggtggtgacgagcgtctacaccgtcggcgcgtggaacccgtacgtgtac
tgcctcggcaatccgatcctgctcgccgatccgaacggctgcagcttcctgagcgtgctc
gagatcatcggcgtcgcgatcctcgcggcggcctgcgtcgtcggcgcgattttcacgggc
ggcgcgacgctcgtcgcgctcggcgtgctgtccgcgaacatcggcggatggctgctcgcg
ggcgtggcgctcggcagcctcggcggcgcgatcgcgggcgagctcgccgcgcagaaggcg
ggcggcaacctgtgggcgggcgcgttcctcggcgcattcctcggcggcgcgacctcgctg
atcggcggcgcggccgcggccggcatcgacacactgatcggcggcacgaagacgttcctg
tcgttcgtcgcggcgggcgcgatccagggcacgctcgcgggcgcgggcacggggctcgcg
atcgggtacgcgggcggcaagggcaatgccgaatcgatgttgatcgcgatggccaagggc
gccgcatggggcgcggtgctcggcacgctgctcggcgcggggatcggcgcgatcgcgggc
acgggcatcagcggcgcggcgaagccggacaacttcctgaacattggtgcgttcggccag
aagttcgcggatttcacgagcacatcgacggcgatcaactcggccgacaacgcggcgggc
gtgaccgaatcgctcgcgcagctttcgatgccgaacggtttcaacgcgggtaacctgctc
ggcctgctgccgaacctcgtgacgacgaacgaacaggcggccggctggttctcgataccg
atcggctggctcgggccgggcgtgctgaacgacgcggggttcgcggggctcgtcgatacg
tcgatggcgctcgaccaggcgggattcagctacgcgcaccagatctcgctgctgctcggc
gcggcgccctacttcatcgactacgcggcgacgatggcgcagatcgtcgatgcgaacggc
gtgaacaacttcgagatggcgttcaacaacgcgttcgggtcggggagcccgagcaatacg
gggtga
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