Burkholderia mallei FMH 23344: DM51_1733
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Entry
DM51_1733 CDS
T03523
Name
(GenBank) beta-eliminating lyase family protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bmaf
Burkholderia mallei FMH 23344
Pathway
bmaf00260
Glycine, serine and threonine metabolism
bmaf00460
Cyanoamino acid metabolism
bmaf00630
Glyoxylate and dicarboxylate metabolism
bmaf00670
One carbon pool by folate
bmaf00680
Methane metabolism
bmaf01100
Metabolic pathways
bmaf01110
Biosynthesis of secondary metabolites
bmaf01120
Microbial metabolism in diverse environments
bmaf01200
Carbon metabolism
bmaf01230
Biosynthesis of amino acids
bmaf01240
Biosynthesis of cofactors
bmaf04981
Folate transport and metabolism
Module
bmaf_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bmaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DM51_1733
09102 Energy metabolism
00680 Methane metabolism
DM51_1733
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DM51_1733
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DM51_1733
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DM51_1733
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DM51_1733
Enzymes [BR:
bmaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DM51_1733
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AIP76843
UniProt:
A0AAX1X2X7
LinkDB
All DBs
Position
1:complement(1963303..1964550)
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AA seq
415 aa
AA seq
DB search
MFDRAQSTIANVDPEIWQAIQQENVRQEEHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDIVEQLAIDRVKALFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNEAEDIDYEAAEQLAHEHKPKLIVAGASAFAL
KIDFERLAKIAKAVGAYLMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEYEKQINSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFKEYQQKVVENARVLAQTL
VKRGLRIVSGRTESHVMLVDLRAKNITGKAAEAALGNAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFGPQEAELVGNLIADVLEHPEDAATIERVRAQVAELTKRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagcccaaagcaccattgcgaacgtcgatcccgagatctggcaagcgatt
cagcaggaaaacgtccgtcaggaagagcacatcgagctgatcgcgtcggagaattacacg
agcccggccgtgatggcggcgcaaggctcgcaactgacgaacaagtacgcggaaggctat
ccgggcaagcgctattacggcggctgcgaatacgtggacatcgtcgagcagctcgcgatc
gatcgcgtgaaggcgctgttcggcgccgaagcggcgaacgtgcagccgaactcgggctcg
caggcgaaccagggcgtgttcttcgcgatgctcaagccgggcgacacgatcatgggcatg
agcctcgcgcacggcggccacctcacgcacggctcgccggtgaacatgtcgggcaagtgg
ttcaacgtcgtgagctacgggctgaacgaggctgaagacatcgattacgaagcggccgag
cagctcgcgcacgagcacaagccgaagctgatcgtcgcgggcgcgtcggcgttcgcgctg
aagatcgatttcgagcgcctcgcgaagatcgccaaggcagtgggcgcgtacctgatggtc
gacatggcgcactacgcgggcctgatcgcggcgggtgtctatccgaacccggtgccgcac
gcggatttcgtcacgacgacgacgcacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggccgagtacgagaagcagatcaactcggcgatcttcccgggcatccagggc
ggaccgctgatgcacgtgatcgccgcgaaggccgtcgcgttcaaggaagcgctgtcgccg
gaattcaaggaataccagcagaaggtggtcgagaacgcccgcgtgctggcgcaaacgctc
gtcaagcgcggcctgcgcatcgtgtcgggccgcaccgagagccatgtgatgctggtcgac
ctgcgcgcgaagaacatcacgggcaaggcggcggaagcggcgctcggcaatgcgcacatc
acggtcaacaagaacgcgatcccgaacgatccggagaagcccttcgtgacgagcggcgtg
cgcctgggctcgccggcgatgacgacgcgcggcttcggcccgcaggaagcggagctcgtc
ggcaacctgatcgccgacgtgctcgagcatcccgaagacgcggcgacgatcgagcgcgtg
cgtgcgcaggtcgccgagctgacgaagcgtttcccggtctatcgctga
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