Burkholderia mallei FMH 23344: DM51_999
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Entry
DM51_999 CDS
T03523
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bmaf
Burkholderia mallei FMH 23344
Pathway
bmaf02024
Quorum sensing
bmaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM51_999 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM51_999 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmaf03019
]
DM51_999 (hfq)
03036 Chromosome and associated proteins [BR:
bmaf03036
]
DM51_999 (hfq)
Messenger RNA biogenesis [BR:
bmaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DM51_999 (hfq)
Chromosome and associated proteins [BR:
bmaf03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
DM51_999 (hfq)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
SelB_WH1
EDC3_N
Motif
Other DBs
NCBI-ProteinID:
AIP77840
LinkDB
All DBs
Position
1:1125484..1126095
Genome browser
AA seq
203 aa
AA seq
DB search
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGRGPRAGGAHGGGGRPGGREGGGHGPYGSHGGSREPRGDGGGYGA
RESRGDGGYGSRESRGDGGYGSREPRGDGGYGAREPREPREPRESYGAPQEGASTPSGTQ
ERNGNGPVIVTRRRRSLGPTDGQ
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaatgccgcgcgcaaggaa
cgcaagcgcgtcgaaatttatctcgtcaacggtattcgactgacgggttgcatcgagtcg
ttcgaccagtatctggtgatgctgcgcacgcccgtcggcctgcaaggcatctataaacgc
gccatctcgacgatccagctcgacacgggcggctcccgtccgggcggacgcggcccgcgc
gcgggcggcgcccacggcggcggcggacgccccggcggacgcgaaggcggcggtcatggc
ccgtacggctcgcacggcggctcgcgcgaaccccgcggcgacggcggcggctatggcgct
cgcgaatcgcgcggcgacggcggttatggctcccgcgaatcgcgcggcgacggcggctac
ggttcccgcgaaccgcgtggcgacggcggctatggcgcgcgcgagccgcgtgaaccgcgc
gagccccgcgagtcttacggcgcgccgcaagaaggcgcatcgacgccgtccggcacgcag
gaacgcaacggcaacggcccggtgatcgtcacgcgccgtcgccgttcgctcggcccgacc
gacggccaataa
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