Burkholderia mallei 2000031063: DM57_579
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Entry
DM57_579 CDS
T03522
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bmai
Burkholderia mallei 2000031063
Pathway
bmai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DM57_579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmai03400
]
DM57_579
Enzymes [BR:
bmai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DM57_579
DNA repair and recombination proteins [BR:
bmai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DM57_579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
DUF374
Motif
Other DBs
NCBI-ProteinID:
AIO81361
LinkDB
All DBs
Position
1:2837307..2841119
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AA seq
1270 aa
AA seq
DB search
MSHVAPSGPSASELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADEILVV
TFTKAATAELHERIRARLAQLAHALDTGDDGGDPFIARLFETTLAPERGLDPQTAAKRVR
RALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDGALRFELAADFWRTRVEPV
AAAYPAFAEWLVEYGAGPAALDAQLARRLKKPLARLRWDGLHAADDGAESAARAHFDTAA
AIWRDERGVLGTLLADAQPSLNQRSHKPEAVSEALDAWARYFEQASAVAALPRAALKLTQ
SALEKATKKGGATPRHAFFDVAQALEAAVAALEAAQRARWLSLVEQWLDAAPAELAQRKR
TRRVVSFDDLLANLYRALDAHPWLRETLRARYPAALIDEFQDTDPLQFAIFDTIFAPAGP
LFLVGDPKQAIYSFRAADLHTYLAARARASARYTLAVNQRSTPAIVDACNRVFGANPRAF
VLDGLDYEPVRAGSRVRAPLVDATDPLAGAGDFRIWTLPAGDDVLTKRDAQRHAAHACAA
EIARLMRGARERAVTLGGEPLAASGIAVLVQTHRQGSLVKRVLAAWGIGSVELAQASVFA
TIDAEQLERVLAAIDAPGDLRRLRSALASDWFGLDAAALWRLEQGDAEQDGIDAAARGAS
GNGGGARAASAGAPAPSPADADAMGWVERFSRYRLLWRERGFAVMWRTLAGELRIAERLM
AGADGERRVTDVNHLAELTQARASAQPGIAPTLRWLAAQRLEGGGDDAQLRLESDRNLVQ
IVTVHKSKGLEYAIVFCPFLNDGGLREPAGSGLPDAREYHDESGCAVLHYGCDDEAAERA
SREAVREQAAERARLVYVALTRAVYRCYLVAGTYQSSRSTKEARRSVLNWLVAGAGRDFD
AWLKEPPEDAELAERWQALAGGPVTLGALPVPAHREPLAAGHDAQATRAARRATRGLRDA
WRIASFSSLASAIARDESGIARAADDEMRPDHDALAAALGADALEPPDAAAAIAPAPAAA
PRELAEDDILAFPRGAAAGECLHRLLELSNFADASTWPPAALRALHERPVEAELALAERL
PAMMTRLVADLAATELVPGMRLAALDPARRLTEMEFLFPAPALDFNALRRLLAAHGYPDV
ALEAGTLAGFVKGFIDMIVEHDGRFWIVDWKSNHLGTTPEAYGERALDAAMAHHAYHLQA
LLYMVALHRYLRVRMRGYDYDAHIAGYLYVFVRGVRPDWRNGGASAGVHARRPARALIEA
LDALMREGDA
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacgtcgcgccatccggcccgtcggcgagcgagctcgacgtgttcgcgtgtccg
ctcgacggtgtgaaccagatcgaggcgtccgcgggcaccggcaagacctggaacatctgc
gcgctgtacgtgcgcctgctgctcgaaaaggatctcggcgcggacgagattctcgtcgtc
acgttcacgaaggcggcgacggccgagctgcacgaacggattcgcgcgcgcctcgcgcag
ctcgcgcacgcgctcgacacgggcgacgacggcggcgatccgttcatcgcgcgcctgttc
gagacgacgctcgcgcccgagcgcgggctcgatccgcaaacggcggcgaagcgcgtgcgt
cgcgcgctgcgcgcattcgaccaggcggcgatccacacgatccacgcgttctgccagcgg
gcgctgcaggaagcgccgttcgcggcggcgatgccgttcgcgttcgagatggaagcggac
gacggcgcgctgcgcttcgagctggccgccgatttctggcgcacgcgtgtcgagcccgtc
gcggcggcctatccggcgttcgccgagtggctcgtcgagtacggcgcggggccggcggcg
ctcgacgcgcagctcgcgcggcggctgaagaagccgctggcgcgactgcgctgggacggc
ttgcacgcggccgacgacggcgcggaaagcgccgcgcgcgcgcacttcgatacggcggcc
gcgatctggcgcgacgagcgcggcgtgctcggcacgctgctcgccgacgcgcagccgtcg
ttgaaccagcgctcgcacaagccggaggcggtgagcgaggcgctcgacgcgtgggcgcgt
tatttcgagcaggcgagtgcggtggccgcgttgccgcgcgcggcgctcaagctcacgcag
tccgcgctcgagaaagcgacgaaaaagggcggcgcgacgccgcgccacgcgttcttcgac
gtcgcgcaggcgctcgaggcggctgtcgccgcgctcgaggccgcgcagcgcgcgcgctgg
ctgtcgctcgtcgagcaatggctcgacgcggcgcccgccgagctcgcgcagcgcaagcgc
acgcgccgcgtcgtatcgttcgacgatctgctcgcgaacctgtatcgcgcgctcgacgcg
catccgtggttgcgcgagacgctgcgcgcgcgctatccggccgcgctcatcgacgaattc
caggatacggacccgctgcagttcgcgatcttcgatacgatcttcgcgcccgccggcccg
ctctttctcgtcggcgatccgaagcaggcgatctacagcttccgcgcggcggacctgcac
acgtatctcgccgcgcgcgcgcgggcgtccgcgcgctacacgctcgcggtgaaccagcgc
tcgacgcccgcgatcgtcgatgcgtgcaaccgcgtgttcggcgcgaacccgcgcgcgttc
gtgctcgacgggctcgattacgaaccggtgcgcgcgggctcgcgcgtgcgcgcgccgctt
gtcgacgcgaccgatccgcttgccggcgcgggcgacttccgcatatggacgctgcccgcc
ggcgacgacgtgctgaccaagcgcgacgcgcagcggcacgccgcgcatgcatgcgcggcg
gaaatcgcgcggctgatgcggggcgcgcgcgagcgcgcggtgacgctcggcggcgagccg
ctcgcggcgtccggcatcgcggtgctcgtgcagacgcaccggcagggcagtctcgtgaag
cgcgtgctggccgcatggggaatcggcagcgtcgagctcgcccaggcgtcggtattcgca
acgatcgatgccgagcagctcgagcgcgtgctggccgccatcgacgcgccgggcgacctg
cggcgcctgcgctcggcgctcgcgtccgactggttcgggctcgatgcggcggcgctctgg
cgcctcgagcagggcgatgccgagcaggacggcatcgacgccgccgcccgcggcgcgagc
ggcaacggcggcggcgcgcgcgccgcatcggcgggcgcgcccgcgccgtcgcccgcggac
gccgatgcgatgggctgggtcgagcgcttctcgcgctaccggctgctgtggcgcgagcgc
ggcttcgcggtgatgtggcgcacgctcgccggcgagctgcgcatcgccgagcggctgatg
gcgggggcggacggcgagcggcgcgtgaccgacgtcaatcacctcgccgagctgacgcag
gcgcgcgcgtccgcgcagccgggcatcgcgccgacgctgcgctggcttgccgcgcagcgc
ctcgaaggcggtggggacgacgcgcagttgcggctcgaatccgaccgtaacctcgtgcag
atcgtcaccgttcacaagtcgaaggggctcgaatacgcgatcgtgttctgtccgttcctg
aacgacggcgggctgcgcgagccggccggctccggcctgcccgacgcgcgcgagtaccac
gacgaatcgggctgcgcggtgctgcattacggctgcgacgacgaagcggccgagcgcgcg
tcgcgcgaggcggtgcgcgagcaggcggccgagcgcgcgcggctcgtctacgtcgcgctc
acgcgcgccgtctatcggtgctatctggtcgcgggcacctatcagtcgtcgcgttcgacg
aaggaggcgcggcgcagcgtgctgaactggcttgtcgcgggcgcgggccgcgatttcgat
gcgtggctgaaggagccgcccgaagacgcggagctcgccgagcgctggcaggcgctcgcg
ggcggcccggtgacgctcggcgcgctgccggtgcccgcgcatcgcgagccgctcgcggcc
gggcacgatgcgcaggcgacgcgagccgcgcgacgtgcgacgcgtggcttgcgcgacgca
tggcggatcgcgagcttcagctcgctcgcatcggcgatcgcgcgcgatgagagcggcatc
gcgcgcgcggccgacgacgagatgcgccccgatcatgacgcgcttgccgccgcgctcggc
gcggacgcgctcgagccgccggacgcggccgccgcgatcgcgccggcgcccgccgccgcg
ccgcgcgagctcgccgaagacgacatcctcgcgttcccgcgcggcgcggcggcgggcgaa
tgcctgcaccggctgctcgagctgagcaatttcgccgatgcgtcgacgtggccgcccgcc
gcgctgcgcgcgctgcacgagcgcccggtcgaggcggagctcgcgctggccgagcggctg
cccgcgatgatgacgcggctcgtcgccgatctcgcggcgacggagctcgtgccgggcatg
cgcctcgcggcactcgatccggcgcggcggctcacggaaatggagttcctgtttcccgcg
cccgcgctcgatttcaacgcattgcggcgcttgctcgccgcgcacggctatccggacgtc
gcgctcgaagcgggcacgctggccggattcgtcaaaggattcatcgacatgatcgtcgag
cacgacggccgcttctggatcgtcgactggaaatcgaatcatctcggcacgacgcccgaa
gcatacggcgagcgggcgctcgacgccgcgatggcgcatcacgcgtatcacctgcaggcg
ctgctctatatggtcgcgctgcatcgctatctgcgcgtgcgcatgcgtggctacgactac
gacgcgcacatcgcgggctatctgtacgtgttcgtgcgcggcgtgcgtcccgattggcga
aatggcggcgcgagcgccggcgtgcatgcgcggcggcccgcacgcgcgctgatcgaggcg
ctcgacgcgctgatgcgcgagggggatgcatga
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