Burkholderia mallei 23344: DM55_228
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Entry
DM55_228 CDS
T03323
Name
(GenBank) uracil-DNA glycosylase, 4 family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bmal
Burkholderia mallei 23344
Pathway
bmal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bmal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DM55_228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmal03400
]
DM55_228
Enzymes [BR:
bmal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DM55_228
DNA repair and recombination proteins [BR:
bmal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DM55_228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Uma2
Motif
Other DBs
NCBI-ProteinID:
AIO52407
LinkDB
All DBs
Position
1:complement(249781..251148)
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AA seq
455 aa
AA seq
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MAWTEAALEELGLAPAWVRRDAARAADVNEAAAHAAGEAAVAAVARGAQPASPDASREPA
RRIARDGGRDGGQNGASGDAGSASPNDAAHAMARVAGAEASAAAAVADEHAALARQAGDG
RGQARQAAAESGARAAADAPAPAAAPASRTRDATIARGASPDEPGVVGVVGVVGVADEPS
VAGGARRARTSGGGAEVPASALDLTDAAEATRPAAAPAPAALTGGDAGAAASDEDMSWFD
LEPVHEPALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHAD
WMLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEP
DEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIASMRGRVHQYEGVPVIVTYH
PAYLLRSLQDKAKAWSDLCLANDTYRSAAPAADPP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcatggactgaagcggcgctcgaagaactggggctcgcgcccgcgtgggtgcggcgc
gacgcggcgcgcgctgcggacgtgaacgaggcggccgcgcacgcggccggagaagccgcg
gtcgcggcggttgcgcgaggagcgcagccggcgtcgccggatgcgtcgcgcgagccggcg
cgtcggatcgcgcgcgacggcgggcgcgacggcgggcaaaacggcgcgagtggcgacgcg
ggatcggcgtcgccgaacgacgcggcgcatgcgatggcgcgtgtcgcgggcgcggaagcg
agcgcagccgccgccgtcgccgacgaacacgcggcgcttgcgcggcaggccggcgacggg
cgcggacaggcgcggcaagcggcggccgaatccggcgcgcgggcggcggcggatgcgccc
gcgccggccgcggcgcccgcatcgcggacgcgggatgcgacgattgcgcgcggggcttcg
ccggacgagccgggcgtggtgggcgtggtgggcgtggtgggcgtggcggacgagccgagc
gtggcgggcggcgcacgccgcgcgcggacgagtggcggcggcgcggaggtgccggcgagc
gcgcttgacttgacggatgcggccgaggcaacgcgtccggcggcggcgcccgcgccggcc
gcgctcaccggtggcgatgccggcgcggcggcgtccgacgaggacatgtcgtggttcgat
ctcgaaccggtgcacgagcccgcgctgccggacgttgccgcacggcccgccgccactacg
ccgtccgtcgccgagctcggctgggacgaactgcgcgcgcgcgtcgccgactgcgcgcgc
tgccgcctctgcgaaaagcgcacgaacacggtgttcggtgtcggtgacgagcacgccgac
tggatgctcgtcggcgaggcgcccggcgagaacgaggacaagcaaggcgagccgttcgtc
ggccaggcgggcaagctgctcgacaacatgctgcgcgcgctggcgctcaagcgcggcgag
aacgtctacatcgcgaacgtgatcaagtgccggccgcccggcaaccgcaatccggagccc
gacgaggtcgcgcgctgcgagccgtatctgcagcggcaggtcgcgctcgtgaagccgaag
ttgatcgtcgcgctcggccgcttcgccgcgcagacgctgctcaagacggacggaagcatc
gcttcgatgcgcgggcgcgtccatcagtacgaaggcgtgcccgtgatcgtcacgtaccat
ccggcgtatctgctgcgcagtctgcaggacaaggcgaaggcctggtccgatctgtgtttg
gcgaacgatacctaccggagtgccgcgcccgccgccgatccgccatga
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