Burkholderia mallei 23344: DM55_3
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Entry
DM55_3 CDS
T03323
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bmal
Burkholderia mallei 23344
Pathway
bmal03030
DNA replication
bmal03430
Mismatch repair
bmal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DM55_3 (dnaX)
03430 Mismatch repair
DM55_3 (dnaX)
03440 Homologous recombination
DM55_3 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmal03032
]
DM55_3 (dnaX)
03400 DNA repair and recombination proteins [BR:
bmal03400
]
DM55_3 (dnaX)
Enzymes [BR:
bmal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DM55_3 (dnaX)
DNA replication proteins [BR:
bmal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DM55_3 (dnaX)
DNA repair and recombination proteins [BR:
bmal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DM55_3 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_14
AAA_16
DUF3646
AAA_5
TsaE
AAA_18
Mg_chelatase
AAA_2
AAA_assoc_2
Com_YlbF
AAA_24
Glyco_tranf_2_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AIO50881
LinkDB
All DBs
Position
1:complement(2112..4589)
Genome browser
AA seq
825 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLERILGEERIAFEPQALRLLARAAQGSMRDALSLTDQAIAYSANEVTETAVSGM
LGTLDQTYMVRLLDALAAADGPQILAVADEMALRSLSFSAALQDLASLLHRIAWAQFAPA
SVLDEWPEAADLRRFAELLSPEQVQLYYQIATVGRGELGLAPDEYAGFTMTLLRMLAFEP
ATTGGGAPAGGVPARVAGAAPKSGARAAAAVGASAVPAVTGATGATGAALAPKAAAARAA
TRAEAPPAAPARPATAERGDDASDGDAPVPAKANARASADSRCDERDAQPPADSGSASGA
ASSAPPDTAFESAPRAAAPSAATPAAVPDARAPAAASAEDAVEAAAPAAPESRPPTPAAG
APVSRATGAAAALDVLRNAGMRVSSGRGAGAARPAAGPAASPTKPAPRAQVSVPTPRARA
ATGDAPPNGAARAEARAESRGAPPPWEDIPPDDYVPLSMDDGFIPPDDGFVPVFDSGPDD
VRVAPKPAPAPPVDTRPLPEPIPLDAIGYDGEWPTLAASLPLKGVAYQLAFNSELTAADG
GTLKLAVPVPQYADAAQVAKLKAALADALGKPVDVAVEVGPARRTAAALAAAERAKRQRE
AEQEMSADPFVQQLLREFGASIVEGSIRPVGAEAGAADGASPTLH
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaagtggcgtccgaaggatttcgcttcgctcgtcggc
caggagcacgtcgtcagggcgctcacgcacgcgctcgacggcgggcgtttgcatcacgcc
tatctattcacgggcacgcgcggcgtcggcaagacgacgctgtcgcgcatcttcgcgaaa
gcgctcaattgcgagacgggcgtcacgtcgcagccgtgcggcgtgtgccgcgcgtgtcgc
gaaatcgatgaagggcgcttcgtcgactatgtcgaaatggatgccgcgagcaatcgcggc
gtcgacgaaatggccgcgctgctcgagcgcgcggtgtacgcgcccgtcgatgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgacgaaccatgcgttcaacgcgatgctc
aagacgctcgaagagccgccgccgcacgtcaagttcatcctcgcgaccaccgatccgcag
aagattcccgtcaccgtgctgtcgcgctgcctgcagttcaatctgaagcagatgccggcc
gggcacatcgtgtcgcatctcgagcggattctcggcgaagagcgcatcgcgttcgagccg
caggcgctgcgtcttctcgcgcgcgcggcgcagggcagcatgcgcgatgcgctgtcgctg
accgatcaggcgatcgcgtattcggcgaacgaagtgacggaaaccgccgtgtccggcatg
ctcggcacgctcgaccagacctatatggtgcggctgctcgacgcgctcgccgcggccgac
ggcccgcagattctcgccgtggccgacgagatggcgctgcgcagcctgtcgttctcggcc
gcgctgcaggatctcgcgagcctgctgcaccggatcgcatgggcgcagttcgcgccggcg
tcagtgctcgacgaatggccggaggcggccgatctgcgccgcttcgccgaactgctgagc
ccggagcaggtgcaactctattatcagatcgcgacggtcgggcgcggcgagctcgggctc
gcgcccgacgaatacgcgggcttcacgatgacgctgttgcgcatgctcgcgttcgagccg
gcgacgacgggcggcggcgcgccggcaggcggggtgcctgctcgggtggcgggcgccgcg
ccgaagtcgggcgcgcgtgctgctgcggcggtcggcgcgtcggcggtgcccgcagttact
ggagctactggggctactggggcggcgcttgcgccgaaggcggctgccgctcgtgcggca
acgcgcgccgaggcgccgccggccgcgccggcgcggccggcgacggcggaacggggcgac
gacgcatccgacggcgacgcgccggtgcccgcgaaggcgaacgcacgcgcatcggccgac
tcgcgttgcgacgaacgcgacgcgcagccgcccgccgattcgggcagcgcgtcgggcgcg
gcatcgagtgcgccgccggacaccgcgttcgaatccgcgccgcgagcggccgcgccgtcc
gctgcgacgcccgccgccgtgcccgatgcgcgcgcgccggccgccgcctcggccgaggat
gctgtcgaggcggccgcgcccgccgcgcctgagtcacgcccgccgacgcccgccgccggc
gcgcccgtgtcgcgcgcgaccggcgcggccgccgcgctcgacgtgctgcgcaacgcgggc
atgcgcgtgtcgtccgggcgcggcgccggcgccgcgcgcccggccgccgggccggccgcg
tcgccgacgaagcccgcgccgcgcgcgcaggtgtccgtgccgacgccgcgcgcccgcgcg
gcaaccggcgacgcgccgccgaacggcgccgcgcgcgccgaagcgagagccgagtctcgc
ggcgcgccgccgccgtgggaggacatcccgcccgacgattacgtgccgttgtcgatggac
gatggcttcatcccgccggacgacggtttcgttccggtgttcgacagcgggcccgacgat
gtccgcgtcgcgccgaagccggcccccgcgccgcccgtcgacacgcgcccgctgccggag
ccgattccgctcgatgccatcggctacgacggcgaatggccgacgctcgcggcgagcctg
ccgctcaagggcgtcgcctatcagctcgcgttcaacagcgagttgacggcggccgacggc
ggcacgctgaagctcgccgtgccggtgccgcaatatgcggacgccgcgcaggtcgcgaag
ctgaaggcggcgctcgcggatgcgctcggcaagccggtcgacgtcgcggtcgaggtcggc
ccggcgcgccgcaccgcggcggcgctcgccgccgccgagcgcgcgaagcgccagcgggag
gccgagcaggagatgagcgccgatccgttcgtccagcaattgctgcgcgaattcggcgcg
agcatcgtcgaaggctcgattcgacccgtcggcgccgaagcgggcgccgcggacggcgcc
tcgccgacgctgcactga
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