Burkholderia mallei 23344: DM55_3941
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Entry
DM55_3941 CDS
T03323
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bmal
Burkholderia mallei 23344
Pathway
bmal00100
Steroid biosynthesis
bmal00909
Sesquiterpenoid and triterpenoid biosynthesis
bmal01100
Metabolic pathways
bmal01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bmal00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
DM55_3941
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
DM55_3941
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bmal01006
]
DM55_3941
Enzymes [BR:
bmal01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
DM55_3941
Prenyltransferases [BR:
bmal01006
]
Terpene biosynthesis
Squalene/phytoene synthase
DM55_3941
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
T4SS
Motif
Other DBs
NCBI-ProteinID:
AIO53757
LinkDB
All DBs
Position
2:887340..888389
Genome browser
AA seq
349 aa
AA seq
DB search
MGNSTRAFLLGPLLKGVSRSFYLTLRVLPQGMRDPIGLAYLLARAADTIADTSLIPPAQR
LELLLSLRAQINGAPDPHALARIAGEVAGQQAQTDEKTLLESLGPALAVLSQLSAPDRAA
VRGVVTTLTEGMEFDLRTFPDESSGRIVALREWPALDRYTYLVAGCVGEFWTKMTCAHLP
GLLTEREDTMSERGIRFGKALQMTNVLRDCGRDLRIGRCYLPQAMLDEYGLRAEDLLGPD
ASLRVRPLMHALVRTTLAHFRAGIDYTFAIPRRAPRLRLACFWPIAIGLRTLALLASNDA
WLDPARASKVRRGDVYRILAYSLPLAMSNGALRAWLDRLIADVEARLIA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgggcaattccacccgggcctttctgctgggccccctgctgaagggcgtgtcgcgctcc
ttctatctgacgttgcgcgtgctgccgcaaggcatgcgcgacccgatcggccttgcgtat
ctgctcgcgcgcgcggccgacacgatcgccgacacgtcgctgatcccgcccgctcagcgg
ctcgaactgctgctgtcgctgcgcgcgcagatcaacggcgcgcccgatccgcacgcgctc
gcgcggatcgcgggcgaggtcgcggggcagcaggcgcagacggacgagaagacgctgctc
gaatcgcttggccccgcgctcgcggtgctgtcgcaattgagcgcgcccgatcgcgccgcg
gtgcgcggcgtcgtcaccacgctcaccgaagggatggaattcgatttgcgcacgttcccg
gacgaatcgtcgggccgcatcgtcgcgctgcgggaatggccggcgctcgatcgctatacg
tatctcgttgccggctgcgtcggcgaattctggacgaagatgacgtgcgcgcatctgccc
gggctgctgaccgagcgggaggacacgatgagcgagcgcggcatccgcttcggcaaggcg
ctgcagatgaccaacgtgctgcgcgactgcggcagggacctgcggatcggccgctgctat
ctgccgcaggcgatgctggacgaatacgggctgcgcgcggaggatctgctggggccggac
gcttcgctgcgcgtacggccgctgatgcatgcgctcgtgcgcacgacgctcgcgcatttt
cgcgcgggcatcgattatacgttcgcgattccgcgccgcgcgccgcgcctgcggcttgcc
tgtttctggccgatcgcgatcggcctgcggacgctcgcgctgctcgcgtcgaacgacgcg
tggctcgatccggcgcgcgcgtcgaaggtgcggcgcggcgacgtctaccggatcctcgcg
tattcgctgccgctcgcgatgtcgaacggcgcgctgcgcgcgtggctcgaccgcctgatc
gcggacgtcgaggcgcggctcatcgcgtga
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