Burkholderia mallei 23344: DM55_5
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Entry
DM55_5 CDS
T03323
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bmal
Burkholderia mallei 23344
Pathway
bmal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM55_5 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmal03021
]
DM55_5 (rho)
03019 Messenger RNA biogenesis [BR:
bmal03019
]
DM55_5 (rho)
Transcription machinery [BR:
bmal03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DM55_5 (rho)
Messenger RNA biogenesis [BR:
bmal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DM55_5 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Phostensin_N
Motif
Other DBs
NCBI-ProteinID:
AIO52774
LinkDB
All DBs
Position
1:5775..7037
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AA seq
420 aa
AA seq
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MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPKASKHKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKNNAEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagctcaagtctctgcacgtctccgaattgatcgaaatggccaatggt
ctggagatcgaaaacgcgaaccgcctgcgcaagcaggagttgatgttcgccattctcaaa
aagcgcgccaagacgggagaaacgatcttcggcgacggcacgctcgaagtgctgccggac
ggtttcggcttcctgcgctcgccggaaatgtcgtatctcgcgagcacggacgacatctac
atcagcccgtcgcagatccgccgcttcaatctgcacaccggcgacacgatcgaaggtgaa
gtccgcacgccgaaggacggcgagcgctacttcgcgctggtgaaggtcgacaaagtcaac
gggcagccgcccaaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaagccgctgtcgctcgagcgcgaaatgcgcggcgaggaaaacgtcacgggccgt
atcatcgacatgatcgccccgatcggcaagggccagcgcggcctgctcgtcgcgtcgccg
aagtccggcaagaccgtgatgctccagcacatcgcgcacgcgatcaagcagaaccatccg
gacgtgatcctgttcgtgctgctgatcgacgagcgccccgaggaagtgaccgaaatgcag
cgctcggtcgccggcgaagtgatcgcgtcgacgttcgacgaaccggccacgcgccacgtg
caggtcgccgaaatggtgatcgagaaggccaagcgcctcgtcgagatgaagcacgacgtc
gtgatcctgctcgactcgatcacgcgtctcgcgcgcgcctacaacaccgtgatcccggcg
tccggcaaggtgctgacgggcggcgtcgacgcgaacgcgctgcagcgcccgaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggctcgctcacgatcatcggcaccgcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagaattcaagggcaccggcaac
atggaagtgcacctcgagcgccgtctcgcggaaaagcgcgtctacccgtcgatcaacctg
aacaagtcgggcacgcgccgcgaggaaatgctgatcaagcccgagatcctccagaagatc
tgggtgctgcgcaaattcatccacgacatggacgaagtcgaggcgatggaattcctgctc
gacaagatccgccagacgaagaacaacgccgagttcttcgatctgatgcgccgcggcggc
tga
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