Bombyx mandarina (wild silkworm): 114239384
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Entry
114239384 CDS
T05882
Name
(RefSeq) regulator of gene activity isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114239384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114239384
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114239384
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114239384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
114239384
NCBI-ProteinID:
XP_028025353
UniProt:
A0A6J2J7Y1
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MANLNFQQVPRSLASGGVGGVGGRVSSGLVGSVSGHVTPTFGGALSPGRNSTAMPGGAPP
SMASRATLFGQRAFADRRVTMPTTLSQANSNSMSSMSNLSRFNAGNNYHSVFGEGGDTST
PPLLDLSEFPSLTARGAGDQAPTTAPPPPGSKPYVGMVKQPTSEQSEFTMSSEDFPALPG
TSTGASTTGGATAAAVAVAGAGASTVSAPAPADIAHAPDKTRKGIQTSPEVVNQGAHNME
FYGKVTNIPDTMIPNQFGIVGLLTFIRAAESDPSLVSLALGQDLTALGLNLNSPDNLNLT
FAGPWADTPCRPQDMDYHVPPEYLINGSIREKLAPLRLGRYKEDLLFYLFYCFVGDVLQI
AAAAELYNREWRYHMEEKVWISQAPGMPMVEKTSTYERGTYYFFDAHNWRKVPKEFHLDY
SKLEGRPQLPPHVLT
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttgaattttcaacaagtgcctcgaagcctagctagtggcggagttggtggc
gttggaggcagagtgagctcaggtcttgttggtagtgtctcaggacatgtgacaccaact
tttgggggcgccttgtcgcctggccgtaattcaactgcaatgccaggcggagctccccca
tcaatggcatctagagctacgctgtttggtcaacgagcttttgcagaccgaagggttaca
atgccaacaactttatctcaagctaattctaattcaatgtcgagtatgagtaatctgtca
cggttcaacgctggcaacaactaccattcagtttttggtgaaggtggtgatacatcaaca
ccaccacttctggacctaagcgaatttccatcactaacagcaagaggcgcgggtgaccaa
gcacccactacagcaccaccacctccgggctctaaaccctatgttggtatggtgaagcag
ccgacatcggaacaatcagaatttacaatgtcttcggaagattttccggcgttacccggc
acgtcgacaggcgccagtacgacgggcggcgcgacggcggcggcggtggcggtggccggc
gccggcgcctccacggtctccgcgcccgcacctgcagacattgcacacgcaccagacaag
acgcgcaaaggaatacagacttctcctgaagttgtcaatcaaggagcgcataatatggaa
ttttacggcaaagtaacaaacataccggatacaatgataccaaaccaatttggaatagtc
ggtctattgacttttatccgtgctgcggaatcggaccctagtctagtatcgctagcattg
ggacaggatttgactgctttaggattgaatttaaattcacctgataaccttaacttgacg
tttgctggcccatgggcggatacgccttgcagaccacaggacatggattatcacgtacct
cccgaatatctaattaatggttcaataagagaaaaactagcgcctctacgactcggaaga
tataaagaagatctattattctatttgttctactgtttcgttggtgacgttttacaaatt
gcggctgcagcagagttatacaatcgcgaatggcgatatcatatggaggagaaggtgtgg
atctcacaagcgcccggcatgccaatggtcgagaagacttcaacgtacgaacgcggcacc
tactacttcttcgatgcgcacaattggagaaaggtgccgaaagagtttcatttggattac
agcaagctggagggtcggccgcagttaccgccccatgtgctcacgtag
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