Bombyx mandarina (wild silkworm): 114239465
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Entry
114239465 CDS
T05882
Name
(RefSeq) retinal-specific ATP-binding cassette transporter-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
114239465
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bman02000
]
114239465
Transporters [BR:
bman02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
114239465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC2_membrane_3
R1_ABCA1
AAA_23
AAA_29
RsgA_GTPase
AAA_22
AAA_30
AAA_15
SMC_N
Rad17
MukB
Motif
Other DBs
NCBI-GeneID:
114239465
NCBI-ProteinID:
XP_028025472
UniProt:
A0A6J2J8K3
LinkDB
All DBs
Position
Unknown
AA seq
1664 aa
AA seq
DB search
MDCHSVKVLMWKHLTVRMRRYFHTLVELLSPIALILLFSALNIVKTPPDHVVSSAQYNSE
YHSKNFERPNCIHYYPETNLTKTLMDQVAKKFHIEKIICSGGFNRGYCPIQNESFFKQMA
YSLPYKDAVVIFKDMSSDEWPKNLIYTIRMKREFDTDLIYPKDGRLIPHSAFSFEYRQFT
ALQWTIDTSYIEVLTGKDINIDMSMQEFPYYSWKNNDPNITTGIASICQLSLLLVFVFLM
SRLLNERATGIQELMKMVGVSSSSLTASHFLNVLAGGVLYAGVVCGVLTADVALFETRAA
AALLCVGLLLHFVSVVGAAFVCSYIVRSSECRRKKKGDWQWVLLKDHPALFVRSSGVRPG
YGVLAYPMHALRGLTMPGALRLLTGLLPHVPLAWLLDELSVLDGNGESITVSSIMKSHTA
VSYSVFVSHLMMLAQILIFFFLNWYLSLVRPGKYGQALPWYFLFKKQYWSKNEIGPKFDS
DAEEQVPIVNDKKYFEEPPQNAEVGIRICNVSKVFQNQKALDNVSLDVYKGEITVLLGHN
GAGKTTLMSIITGMMSATEGKVYVNGTETASQQREVRKHLGLCPQHNLFFPDLTVLEHVM
FFTMLRGTSFREAKASSKALLEQLGIADKANSNSSELSGGMMRRLQLACALAGDADVLIL
DEPTSGLDVETRRSLWDLLLSVRGSRTVLLSTHFMEEADALGHRAAALHHGRLRCHASTM
YLKKAIGTGYRLSFTTIGLPNEAAITAAVASLVPEVTLKEKSLNTLAYSLPAAHAHRFPD
LFLALESNRSKLGIDSIGVGISTLEEVFLKLCSDVDTTFADANGDTSETADHYQEPQSKR
LTGFPLYLRQFNVLMKRQFNYIMSKKLSFFLLQVLIPMLVIGLVTESVNHDYGSTQADVS
APMTLDLYKDIDGLKALYNVNQEGVNFKAITDAYPHVKFEENTDIVNTTLGYAKYDPMKY
IKYVLGVELNSTHAKALYTTTIRHAAPISVNILTNLLATLHAPAAGARTLTAVNEPVRAE
LAAAPSSAPSIKDTKQVFVVLLWIFLVVFTILSTTINAVSLPCAERESGARHTHVMSGCP
PELHWASTLLFHLAVCTAALVVPTLVIAATVERDQTINQPGFLLTFFLILELGAMAFFAL
IYLVSFHFNETSATIVLSAIVIIFGIFTPSVSVIYTILDDAKGVTYYVFSVINYVVPPHT
VMMASVLAGMRAVNNAMCKLDSEFCSIAIGRQMTTVSKDLDPTCYLCFNDIAPTRFVIML
FVQFAFLMSLVLLSERGWLNGCFDALMNRAYPAAPPAAPPAAPPAASPSDLVRAEAAYVS
KAITLPSNQIKDVLLADNLHKRYPKIFGKSCNAVKGVSFSVKKGECFGLLGVNGAGKSTT
FKMLTAEECATRGNIFANGYHLKRSVGPYLRSLGYCPQFFGLDDFLTGAQNLALLLTLRG
LDVVDVNAEVASWIQIVGLEKYMHRPVSGYSGGCKRRLAAGAALAAGAAVTLLDEPTAGV
DVAARRRVWAALRRALHRGRAVVISSHSMDEMDALCSSIAILSAGGVRALGSGAALRAAH
ASGHALLLKIAHAPAADEVDGAKGELDRLKGVLHQSFDCTLKDEHKTMLHYHINETMKYS
ELFTQLEELKANFPGLVEDYSVTETTLEEVFLSFAKEQNEPASV
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atggattgccattccgttaaggtattaatgtggaaacacctcacggtgcgtatgaggagg
tactttcacacccttgtagagcttctgtcgccaatagcattgattttgctattcagtgct
ctaaatattgttaagacacctcccgatcatgttgtgtcatcagctcaatacaactcagaa
tatcattctaagaactttgaacgaccaaactgcattcattattatccagaaacgaacctt
acaaaaacactcatggaccaagttgccaagaaattccacatagagaaaataatttgctca
ggtggtttcaatcggggttactgtccgatacaaaatgagtctttcttcaaacagatggct
tattcccttccatacaaagatgcagtcgtcattttcaaagacatgtcatcagacgagtgg
ccgaagaatctcatctatacaatacgtatgaaaagggaatttgacacggacctgatatat
cctaaggacggcaggctgatcccgcattcggcttttagctttgaatacagacaattcacc
gctctacagtggacgatcgacaccagttacatagaggtgctgaccgggaaagacattaat
atagacatgtccatgcaagagttcccgtattattcgtggaagaacaacgacccgaatata
acgacgggcatagcaagcatctgtcagctgtctctgctgctggtgttcgtgttcctcatg
tcgagacttttgaacgaacgagcgaccggcatacaggaactaatgaaaatggtcggagtg
tcgtcgagcagcctgaccgcgtcgcacttcctgaacgttctggcgggcggcgtgctgtac
gcgggcgtggtgtgcggcgtgctcacggcggacgtggcgctgttcgagacgcgcgcggcc
gccgccctgctgtgcgtcggcctgctgctgcacttcgtcagcgtcgtcggggccgccttc
gtctgcagctacatcgtgagaagcagtgagtgtaggagaaaaaaaaagggagactggcaa
tgggtcctactgaaggaccaccctgcactcttcgtgcgatcgtctggcgtccgcccgggn
tacggggtgctggcatacccgatgcacgcgctgcgggggttgaccatgcccggcgcgctg
aggctgctgacggggctgctgccgcacgtgccgctcgcctggctgctggacgagctgagc
gtcttggacggaaacggtgagtcgatcacagtgtcgtcgataatgaagtcccacacggcc
gtcagctactccgtgttcgtcagccatctgatgatgctggcccagatcctaatattcttc
ttcctgaactggtatctgtctctggtcagacccggaaagtacggacaagctttaccctgg
tacttcttgtttaagaaacaatactggtcgaagaacgaaatagggcccaagttcgactcg
gatgccgaggagcaggtgccgatagtcaacgacaagaagtacttcgaggagccgccgcag
aacgccgaggtcggcatccggatctgcaacgtgtccaaggtgttccagaatcagaaagcc
ctcgacaacgtgtcgctggatgtgtacaagggcgagatcaccgtgctgctgggacacaac
ggcgccggcaagaccaccctcatgtccatcataaccggtatgatgagcgcgaccgagggt
aaggtgtacgtgaacggcacggagactgcctcccagcagagggaagtccggaagcacctc
gggctctgcccccagcacaacctgttcttcccggacctcaccgtgctcgaacacgtcatg
ttcttcactatgctcaggggaacatccttcagagaagcgaaagcgtcttcgaaagctctt
ctcgaacagttgggtatcgcggataaagcgaacagcaacagctccgagctgtccggcggc
atgatgaggaggctgcagctggcgtgcgcgctcgccggcgacgcggacgtcctcatcctg
gacgagcccacgtcggggctggacgtggagaccaggaggagcctgtgggacctgttgctt
agcgtgcgagggtcgcgcaccgtgctgctgtccacgcacttcatggaggaggcggacgcg
ctgggtcaccgcgccgccgcgctgcaccacggccgactgcgctgccacgcctccaccatg
tacctcaagaaggccatcggtacgggatatcggctgtcgttcacgacgatcgggctgccc
aacgaggcggccatcaccgcggccgtcgcgtcgctggtccccgaagtgaccctcaaggag
aagtcgctgaacacgctcgcgtacagtctgccggccgcgcacgcccacaggttcccggac
ctcttcctggcgttagagtcgaaccgatctaaattgggcatcgactccatcggcgtgggc
atctctacgctggaggaagtattcctgaaactttgcagcgatgtcgacacgaccttcgcc
gacgccaacggcgacaccagcgaaactgcggaccactaccaggagccgcagagtaagagg
ctgaccggcttccccctgtacctcagacaattcaatgtcctaatgaaaaggcagttcaac
tacataatgtccaaaaaactctcatttttcttactgcaagtcctgatacctatgctagtg
atcggcctggtcacggagtccgtgaaccacgactacgggtccactcaggccgacgtcagc
gcgcccatgaccctcgatctgtacaaggacatcgacggcctcaaagctttgtacaacgtg
aaccaagagggagtcaacttcaaagcgatcactgacgcctacccgcacgtcaagtttgag
gaaaatacagacatcgtcaatacaacactgggctacgccaagtatgatccaatgaagtac
attaaatacgttctgggtgttgaacttaattccacacatgcaaaggcattgtacacgacg
acaatccggcacgccgctccgatatcggtgaacatcctgacgaacctgctggcgacgctg
cacgcgccggcggcgggcgcgcgcacgctcaccgccgtcaacgagcccgtgcgcgcggaa
ctggcggccgcgccctcctccgcgccctccatcaaggacactaaacaagtcttcgtcgtc
ctcctttggatatttttagtggttttcacgattctatcgacgaccataaacgcggtgtcg
ctgccgtgtgcggagcgggagtcgggcgcgcggcacacgcacgtcatgtcgggctgcccg
ccggagctgcactgggcctccacgctgctgttccacctggccgtctgcaccgcggcgctg
gtcgtccccacgctggtcatcgcggccaccgtcgaacgagaccagaccatcaaccagcct
ggcttcttgctaacgttcttcctaatcttggagctcggcgctatggctttcttcgcgtta
atatatttagtgagcttccacttcaacgagacgtcggccactatcgtgctatccgccatc
gttattatattcggcatcttcacgccctcagtgagcgtcatctacacgatcctcgatgat
gcgaagggtgtcacctactacgtgttctcggtgatcaactacgtggtcccgcctcacacc
gtgatgatggcgagcgtgctggcgggcatgcgggccgtgaacaacgccatgtgcaaactg
gactcggagttctgttccatcgccatcgggagacagatgaccaccgtttcaaaggatctg
gatccgacgtgctacctatgcttcaacgacatcgcccccacacgcttcgttataatgctg
ttcgttcagttcgcctttttaatgagcctggtgctcctttcggagcggggctggctgaac
ggctgcttcgacgcgctcatgaaccgcgcctaccccgccgcgccccccgccgcgcccccc
gccgcgccccccgccgcctccccctccgacctcgtgcgcgccgaggccgcttacgtcagc
aaggcgatcacactgccaagcaaccaaatcaaggacgttctgttagcggacaacctgcac
aagaggtaccccaagatcttcggcaagtcctgcaacgccgtcaaaggagtcagtttctcg
gttaagaaaggagaatgctttggcctcctcggcgtgaacggagccggcaagtctaccacc
ttcaagatgctgacggccgaggagtgcgccactcgaggcaacatcttcgcgaacggctac
cacctgaagcgcagcgtcggaccgtacctccgttccctcggttactgcccacaattcttc
gggctggacgacttcctgaccggcgcccagaacctggccttgctgctgaccctacgcgga
ctcgacgtcgtcgacgtgaacgccgaggtcgcgtcctggatacagatcgtagggctggag
aagtacatgcaccggcccgtgtcgggctacagcggcggctgcaagcggcggctggcggcg
ggcgcggcgctggcggcgggcgcggccgtcacgctgctggacgagcccaccgcgggcgtg
gacgtggccgcgcgccgccgcgtgtgggccgcgctgcgccgcgcgctgcaccggggacgc
gccgtcgtcatctcctcgcacagcatggacgagatggacgcgctatgctcttcgatagcc
atcctgtcggcgggcggcgtgcgcgcgctgggctcgggcgccgcactgcgcgccgcgcac
gcctccggacacgcgctgctgctcaagatcgcgcacgcacctgccgcagacgaagtggac
ggtgccaagggtgagctggaccggctgaagggcgtgctgcaccagtccttcgactgcacc
ctcaaggacgagcacaagacgatgctgcactaccatataaacgaaacaatgaaatattcg
gaactcttcactcagctcgaggaactaaaggccaacttccccgggctcgtggaggactat
tcggtcacggagaccaccctggaagaggtgttcctgtctttcgccaaagaacaaaatgaa
cccgcgtccgtatga
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integrated database retrieval system
