Bombyx mandarina (wild silkworm): 114239578
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Entry
114239578 CDS
T05882
Name
(RefSeq) uncharacterized protein LOC114239578 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114239578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bman03000
]
114239578
03019 Messenger RNA biogenesis [BR:
bman03019
]
114239578
04121 Ubiquitin system [BR:
bman04121
]
114239578
Enzymes [BR:
bman01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114239578
Transcription factors [BR:
bman03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
114239578
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114239578
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114239578
Ubiquitin system [BR:
bman04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114239578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-RING_2
zf-C3HC4
Baculo_IE-1
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
114239578
NCBI-ProteinID:
XP_028025646
UniProt:
A0A6J2J8C6
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MSVLNQSGEEQVECPLCMEPLEVDDLHFYPCTCGYQICRFCWNRIREGENGLCPACRKAY
PENPADFIPLSQEQVAAIKTEKKAREQKRRNKTLESRRALANVRVVQNNLVFVVGLPVRL
ADPEILKRQEYFGKYGKIHKVVINQSTTYAGSQGPSASAYVTYVSSADALRAIQGVNNVT
LDGRVLKGSLGTTKYCANFMKNQPCPKPDCMYLHDLGDPKASFTKEEMHAGLHQVYERKL
HNQLLASQQRDKNNEDKQLNGSGNSSTNAEKSGSKDGNQSNYIPTTVVTSSHINNVVNSK
SKEECANGSTSSSSSSSSRSDSSDSSSSSSGSSANGKEAWPSLGSSPPSDSPARKQTSPK
PQQLHVKSQENGISGSSSPTELHTDTAQQQAQTRNVKETHTDTNRTRNKDTNGTSTHTKK
SKNEKSKHKPSHSTDSGPADDAPRPHSSVFETDSQHNYISNDLDELESDRHSLLETHDLL
ESSDHSLLDDDTHDLLNDAGDALMMQRHRDMLAGLVDGGHLLPQLKGPVLNGYGLLDRDI
SYVNDRPISQMNQGLLDQKEMLLREREQSDMLLRQRELLARQHNVMVEPKHYMPASSIGM
ESASELLGANYHRSPSMVPAFGALPPYALPRPQVLHAPPAHAAHAALLNGFDAAHNSEGR
YLAENMDKFFTDFHKAQQLRLHARAGDERRYQLPRNVLSAEALEMEHKQRMNNVRSGEPA
GRAAGDGDDDLDFDPFKETQKAFAELMENEMMQNAVSGGDNARRSRLAPPGFSHVNNTYG
AGGPRLHAAHQGYNTNSPMFSDWTQMDPAIMSTSVSGGSGLSQHQHDMFVRFNALGVTQA
PPAPPAQPAPAWPPYVPLPPGFTPAQAARPRPEPIDAK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgctgaatcagagtggagaagaacaggtggaatgtccactatgtatggaaccc
ttggaagtggacgacctccacttctacccgtgtacatgtggataccaaatatgtcggttt
tgctggaatcgtattcgagaaggcgagaacggcctctgcccagcttgtcggaaggcatac
ccagaaaacccggcagacttcattcctctcagtcaagagcaggtggcagcgataaagacg
gagaagaaagcccgcgagcagaaacgtcgcaacaagacgctagagtcgcggcgtgcgctc
gcgaacgttcgcgtcgtacagaacaacctcgtgttcgtcgtgggcctgcccgtcagactc
gcagacccggagattttaaaacggcaagagtactttggaaagtatggcaaaattcacaaa
gtagttataaaccaaagtacgacatatgcagggtcacagggtccgtccgcgtcggcgtac
gtgacgtacgtgtcgtcggcggacgcgctgcgtgccatccagggcgtcaacaacgtgacg
ctcgacggacgagtgctgaagggctcgctcggcaccaccaagtactgcgccaacttcatg
aagaaccagccctgtcccaagcccgactgtatgtacctgcacgacctaggtgatccgaag
gcgtccttcacgaaggaagaaatgcacgccggcctgcatcaggtctacgagaggaagctg
cacaatcagctgctcgcctcgcagcaacgggataaaaacaacgaggacaagcaacttaac
ggttcaggtaattctagtacgaatgcagaaaagagcggttcaaaagatggtaatcaatcg
aactatataccgacgacagtggtcacatcgtcacatataaacaacgtagtcaattctaaa
tctaaagaggaatgtgcgaatggcagtaccagttcgagcagcagtagcagtagcaggagc
gacagcagtgatagcagcagcagtagtagcggtagcagtgccaacgggaaggaagcttgg
cccagcctcgggtcctcccctccttcagatagtcccgccagaaaacaaacgagtccgaaa
ccacaacaattacacgttaagtcacaagaaaacggcatatcagggtcgtccagtcccacg
gaactgcacacggacacggcacagcagcaggcacaaacgagaaacgttaaagagacacac
accgacacaaacagaacgagaaataaagacacgaacggcacgagcacacacacaaagaaa
agtaaaaacgaaaagtccaaacacaagcccagccacagcaccgacagcggacccgcggac
gacgcgccgcgcccgcactcctcggtcttcgagacagactcgcaacacaactacatctcc
aatgacctggacgaattagaatcggatcgacatagcctgctggagacccacgacctgctg
gagagcagcgaccacagcctgctggacgacgacacccacgacctgctcaacgacgccggc
gacgccctcatgatgcagaggcaccgagacatgctggccgggctcgtcgacggcggtcac
ctgctgccgcagctcaaggggcccgtgctgaacggctacggattactggacagagatatt
agttacgttaacgataggccaattagtcaaatgaaccagggtttgctggaccagaaggag
atgctgttgagggaacgagaacagagcgacatgctgctgcggcagagggagctgctggcg
cggcaacacaacgtcatggtcgagcctaagcattacatgcccgcctccagtataggaatg
gaatccgctagtgaactattaggtgctaattaccaccggagccccagcatggtgccggcg
ttcggcgcgctgccgccctacgcgctgccccggccgcaggtgctgcacgcgccgcccgcg
cacgccgcgcacgccgcgctgctcaacgggttcgacgccgcacacaacagcgaaggtcga
tatttagcggagaacatggataagttcttcacggacttccacaaggcgcagcagctgcgg
ctgcacgcgcgcgccggcgacgagcggcgctaccagctgccgcggaacgtgctcagcgcg
gaggcactcgagatggaacacaagcagagaatgaacaatgtacgtagtggcgagccggcg
ggccgggcggcgggcgatggcgacgacgacttagacttcgatccgtttaaagagacacag
aaagcgtttgcggaactcatggagaatgaaatgatgcaaaatgccgtttcgggcggtgac
aacgcacgtcgatccaggttagcgccgccgggcttcagtcatgtcaataacacgtacggc
gccggcgggccgcgcctccacgccgcacatcaagggtacaacacgaacagtccgatgttc
tcggactggacgcagatggaccccgcgatcatgtcgacttcggtgagcggcggcagcggc
ctgtcgcagcaccagcacgacatgttcgtgcggttcaacgcgctgggcgtgacgcaggcg
ccgcccgccccgcccgcccagcccgcgcccgcctggccgccctacgtgcccctgccgccc
ggcttcacgcccgcgcaggccgcccgcccccgccccgaacccatcgacgccaagtga
DBGET
integrated database retrieval system
