Bombyx mandarina (wild silkworm): 114240478
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Entry
114240478 CDS
T05882
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114240478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114240478
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114240478
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
ANAPC3
TPR_1
TPR_14
TPR_8
TPR_16
TPR_4
ANAPC8
Motif
Other DBs
NCBI-GeneID:
114240478
NCBI-ProteinID:
XP_028026827
UniProt:
A0A6J2JCK6
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All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MSNNKDRDEPAFLAHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKN
VEKFKNAITQLSGLNYLDVEVKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIK
DARLLQQIILLMLEATICRRTYDKTIEIAKNHGEPLKINNEVSELFERIISRAQLLVGQK
VKLNLKPDSIENIFVIAQQHYINGNVKEAANILGYYKTLKYNYDMKTQGEEIWSAVNNNL
GVIYLSIKKPYLASKYFQHAIKEHLKAMECEDSEKLISCKDRSLYVYNLGLALLGTNNSE
GAFECLVEAARHFPNNPRIWLHLAECCVKKCCSEEAQQYTVKKLGSGPHTRVLLSKEIKA
RYSTSGESFAIPSLSLEFAALCLRNAMTLLPNQEPPTDVTASLIQVPPGIPITWKQRSEL
KNSALVLQSYVLLHLQDPLAALVSANELLAQPDASSSHKAWAHIYAAEALINLDRIADAV
EHLHPPTIHDLVSVLPYQMRDMIAVSVWAKAAVCHILRGDLVTAKKILLQINSPKVLPLQ
MYLEICTGNIDNCHTILRKIRYTNPSIQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaacaaagatcgcgatgaacctgcttttttagctcaccaatgtttcttaaaa
aaggactacacagcggcattacaacatcttagcgacttggaaaaccttgtgggaacttcg
aataaaagggttcaacacaacaaagccgttgtagagtttatggctggagagatgaagaat
gtggaaaaattcaaaaatgccattacacagttatcagggttaaattatttggacgtcgaa
gtcaaggatatgacttcaccctgtttgttgtataattacgcggttattctgttccattca
cgttattattatcaatgtgttgtcatattagagaaattattaagttctaagagcataaaa
gatgcgagattactacagcaaattatcttacttatgttagaagcaacaatatgtcgacgt
acttatgataagactatagaaatcgccaagaaccacggcgagccattaaaaattaataat
gaagttagtgagttatttgaaaggattatatcacgtgctcaattattagttggccaaaaa
gtaaaattaaaccttaagcctgattccatagagaacatatttgttatagcacagcaacat
tacatcaatggtaatgtaaaggaagcagctaatatattgggatattacaaaaccttaaag
tacaattatgatatgaaaactcaaggtgaagaaatatggtctgccgtaaataataatttg
ggtgtcatatatttatcaattaaaaaaccatatttagcctcaaaatattttcagcacgcc
ataaaagaacatttgaaagctatggagtgtgaggacagtgaaaaattaatatcttgtaaa
gatagatcactttatgtgtacaatttggggttagcacttttaggtacaaataattcagaa
ggtgcctttgagtgcctagttgaagctgctagacattttcctaataacccacgaatttgg
cttcatttagctgaatgctgtgtaaagaaatgttgcagtgaagaagctcagcaatacaca
gtaaagaaattgggcagtggtccccacacacgagtcttactctcaaaagaaataaaagca
agatattccacatctggggaatcttttgcaataccatctttatcactggaatttgctgca
ctatgtctacggaatgctatgactctacttcccaaccaagaacctccaacggatgtaact
gcatcacttatacaagtaccaccaggtatcccaataacctggaaacaacgtagcgaactc
aagaactctgcccttgttttacaaagttatgtattactgcacttgcaagatccattagcg
gctcttgtcagtgctaatgagttattagctcaaccagacgcatctagtagtcataaagca
tgggctcacatatatgcagctgaagctctcataaatcttgatcgaatagctgatgctgtg
gagcatctacatccaccaacaattcatgacttagtttcagtactgccgtatcaaatgagg
gatatgattgctgtgtctgtgtgggctaaggctgcagtgtgtcatattttaagaggggat
ctagtaacagcaaaaaagatacttttacaaataaattcaccaaaagttctacctctacag
atgtatttagagatttgcacaggtaatatagacaattgtcacacaatattgagaaagatt
agatacacaaatccctccattcaataa
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