Bombyx mandarina (wild silkworm): 114240691
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Entry
114240691 CDS
T05882
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
bman
Bombyx mandarina (wild silkworm)
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bman04121
]
114240691
Enzymes [BR:
bman01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114240691
Ubiquitin system [BR:
bman04121
]
Ubiquitin ligases (E3)
U-box type E3
114240691
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4_2
zf-CCHC
U-box
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
114240691
NCBI-ProteinID:
XP_028027135
UniProt:
A0A6J2JCB7
LinkDB
All DBs
Position
Unknown
AA seq
1590 aa
AA seq
DB search
MSVHYKFKSALDYDTVTFDGLHISVGDLKAAISQQKRIGKTSDFDLEITNAQTKEIYVDD
NALIPKNTSLLVARVPLSQQPKKQWEGSNSNSAPHKDVTVNKGLADLSRMEGSEQDKINA
MISQSTFDYDPSNYQKIRGQNQRGAVPSNYICYKCQKRGHWIKDCPAANSGEPVEIRRST
GIPRSFMVPVEGPKAPGAMMTPSGTFAVPAVDHEAYMASENCAGDPSGSAPSAPEPTIPD
ELICSLCRDLLTDAVMIPCCGNSFCDECIRGALLESEDHECPDCREKEISPTTLIPNRFL
RNSVSSFRNQTGYSRRAPHRPSVTPAQARAPIKEATTASSVQQPPPNGPVKPQVTASVES
RGGEESDGSADDNITVTMPPKLAHHAPHRHYRYGHQPMIKPVVENPNSSIPLNLPRIEEQ
RASTPTIDERREPMERRDPMSSQIPYNRGPHPFAHGASQPPQRFNDPPRFGPPPGPGFVE
RFPPEPYQPPPPGIKESPSNRPGEDPLEAFNRMIREKEMRAKRREEERRRELSPSRSRSR
SRTRTRTRSRTPRVRARSRASSRPRYSRSRSMSRGRLRRSPWSPRRRRTRSRSLSLTRSP
SPRRRMRSPIRYRSPPLRSPPRSPLRSPIRSPLRSPVRSPRRTPRRSPPPPRSSPHRYAG
VYDELMSPPRRSVEPPYGARYGPRNSIPPPSYPPIGVKTIAPMGGIPIQADQPPGYRGRY
DMPPFEDIPPGLEPPVPGFEPSPFEKPSFGPPVGLDRERLPHPNYRDSYRPPAYVEGPPP
FRDIPIAVGPTEIPVHVGEQSRYRDNFRPGPYRDQGSVPFRDGPPYRESGSQPPPFRDPN
YRGAAPFRDNSYRSAPYRDNTFRDNPPHNNFRDGVPPFRQSSPESNVHHESNFRDAYRDD
NIVPNRPGYRSNVRSRIGPRRDPNIEHERHRDREGRERDRYADNRDPPERNDRIRNSDRR
PGYDKSRETRDDRREIERNRESERARDHEKTPDKKTRTSPKHRDSRDKKRSESRGRSRDR
ERDRREKKEDRTRDKTSADRSKDHKEKEKKLKERKKKKREKEKEKDIEKKKKRDKKEKKD
KDVKKEDEDPEKSDVKDAIEKQNEVSNLLRIEKPVEIKEENKNVEETIPTTNSPKTEQKD
KVVFDDLYGDEVVGAVDKEIIQTYVKNDVNESVPETNNSDIVTKEEPFDGIELQANADEL
DLKLEESNGQNSKEMLAPLPELSKWEVDDESADKKEGEVMSPKEKADGTKVTSDVIKRAE
NAIFAKAIHSLKPIEIKKISGDRVKLYDDEAPKSTMNNIQITVPVTEMDHRSIEVNEKKK
AHSKTPPPRLSVKERLGGKVDEIRRNREARVIHSTVERVKSRSKTPKRETQHYRRVTVEK
DRNRKGDALRPVSGKGDRRVFSENVKVEKQHFTSNEKRENIEKGVESRDRQEKKSDPKVS
HHERKKSTLDEAHFEPDYDETVESETETKEEPPKKRDYMSLSDKLSDKMNINYENKKSKL
DVESLNLVNLKRKPEPETDSSSDSDDSSSSSSSEERKRKKKKKRAKKKKKRAASDSDSDS
DSSSDDHKKKKKKRKHKKKSSKKKKKSKHK
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcactataaattcaaaagtgcattggattatgacacggttacattcgacggt
cttcacatatctgtaggtgacctgaaagctgcaatatctcagcaaaaacgcattggcaaa
acttcggactttgatttagaaatcactaatgctcaaaccaaagagatatatgttgatgac
aatgctttgattccaaagaatacatctctcctggttgccagagttccactttctcaacaa
ccaaagaagcagtgggaaggctcaaatagtaattcagctccacataaagatgttactgtt
aataaaggactggctgatctatctcgcatggaaggtagcgaacaggataaaataaatgct
atgatatcacaatcaacatttgactacgaccctagcaattatcagaaaataagaggacaa
aatcagagaggggcagtgccatctaattacatttgttataagtgtcaaaagcgaggacac
tggattaaagattgtcctgctgcaaactcaggcgagccagtggaaatacgacggagtaca
ggtattcctcgtagttttatggtacctgttgaaggaccaaaggcaccgggcgccatgatg
actccgagtggaacctttgcagtgcctgccgtagatcatgaggcttatatggcctctgag
aactgtgctggtgatccatctggtagcgcacccagcgctcccgaaccaaccataccggat
gaactaatttgtagtctgtgtcgcgatcttctcaccgatgctgtaatgataccgtgctgt
ggaaactctttttgtgatgaatgcataagaggtgcgttactggaatctgaggatcatgaa
tgtcccgactgtcgggaaaaagaaatatctccaacaacacttattccaaacagattcttg
aggaattctgtgtcgtcttttcgcaatcaaactggatacagccggcgagcacctcatcga
ccctcggtcacgccagctcaagcccgtgctccgataaaagaggcaaccactgcatcgagt
gtacaacaacctccaccgaatggacccgttaaaccgcaagtcacagcctctgtcgagagt
cgcggcggcgaggagtcggacgggtcggcggacgacaacatcacagtcacgatgccgccc
aagctcgcgcaccacgcaccgcatcgacactacagatacggccatcaaccgatgataaaa
ccagttgtcgaaaatccaaattcatccataccactcaatttacctagaattgaagaacaa
agggctagcactccaacaatagatgaacgaagagaaccaatggaacgaagagatccaatg
tcttctcagataccgtacaatcgaggtcctcacccgttcgctcatggagcatcgcaacca
cctcaacgttttaacgatccaccgcgattcggtccaccgcccggtcctggatttgttgag
cgttttcctcctgaaccgtatcaaccacctccgcccggtatcaaagaatcgccttctaac
aggccgggtgaggatccgctggaggctttcaaccggatgatacgcgagaaggagatgcga
gccaagcggcgtgaggaggagcggcgccgcgagctgtctccgtctcgctctcgctcccgt
tctcgcacgcgcacccgcacgcgctcacgcacgccgcgcgttcgcgcccgcagccgcgcc
tccagccgcccgcggtactctaggtcgcgttccatgtcgcgcggccgcttgcgacgttca
ccgtggtcgccaagaagacgccgcacgcgcagccgctctctttcgctaacgaggtcgccg
tccccccggcgtcgcatgcggtctcccatacggtaccgttcgccccctctgcggtcgccg
ccccgctcgccgctacgctcgccgatccgctccccgctccgctcgccggtgcggtcccca
cgccgcacgccgcgacgttcgccgccgccaccgagatcctcaccgcacagatatgccgga
gtatacgacgaactaatgtcccccccgagacgtagcgtagagccgccgtatggagccaga
tacggacctagaaatagtattccaccaccatcatatccacctataggtgtgaaaacaata
gctcccatgggcggtatcccgattcaagctgatcaaccacctggctatcgagggcgttat
gacatgccaccatttgaagacattcctcctggtctggagccacctgtaccaggatttgaa
ccatcgccttttgagaaaccgtcttttggaccaccagttggacttgatcgtgaaagatta
ccacatccaaattacagagactcgtatagacctccagcttacgtcgaaggcccacctccc
tttagagacataccaatagccgttggtcctacagaaattccagtacacgttggtgaacaa
tctcgctatcgagataattttagaccaggaccttatcgtgatcaaggttcagtacctttt
agggacgggcctccttatagagaatcaggatcacaaccccctccttttagagatcctaat
tacaggggtgctgcaccatttcgtgataactcttataggagtgctccgtatagagataac
acatttagagataatccacctcataacaacttccgtgatggcgtgcctccgtttagacaa
tctagtcctgagtctaatgttcatcatgaatcaaactttcgtgatgcttatagagacgat
aatattgtgcctaatcgacctgggtatcgctctaatgttcgtagtagaattggacctagg
cgtgaccctaatattgaacatgaaagacacagagacagagaaggacgagagagagataga
tacgctgataatcgagatcctcctgaaaggaatgatcgtattcgtaattctgatagaaga
ccggggtatgacaagagtagagaaacgcgtgatgatcgtcgcgaaattgaaagaaataga
gagtctgaaagagctcgcgatcacgaaaaaactcctgacaagaaaactagaacttctcca
aaacatcgggactcgcgcgataaaaaacgcagtgaatcaagaggtcgatctagggatcgc
gagcgcgatagacgcgagaagaaagaagatagaactcgtgacaagacttccgctgataga
agtaaagatcataaagaaaaagagaaaaagctcaaagagcggaagaagaaaaaaagggaa
aaagaaaaagagaaagatatcgaaaagaagaaaaagcgggataagaaagaaaagaaggac
aaagacgttaaaaaagaagatgaggatcctgagaaaagtgatgtgaaagacgccatagaa
aaacaaaatgaagtatccaatttactaagaattgagaagccggttgaaatcaaagaagaa
aataaaaatgtcgaagagacgattccaacaactaattctccaaaaactgaacaaaaagat
aaagttgtgtttgatgatttatatggcgatgaagtcgtgggagctgttgataaagagata
atacaaacttacgtcaaaaatgatgtcaacgaatcggtacctgaaaccaataactcggac
atcgtgaccaaggaagagccctttgatggaatcgaattgcaggctaatgctgatgagttg
gatttaaaactggaagaaagtaatggtcaaaatagtaaagaaatgttagcccctttgccc
gaattgtctaaatgggaagtagatgatgaatctgctgacaaaaaagaaggtgaagtaatg
tctcctaaagaaaaggcagacggcactaaagtgacttcagatgttattaaaagagctgag
aatgcaattttcgcaaaagcaattcattctttgaaacccatagaaataaagaaaattagc
ggggatcgagttaagctctatgatgatgaggctccaaaatctacaatgaataatattcag
attactgttccagttacagaaatggatcatagatctatagaagtaaatgagaaaaagaaa
gctcattctaaaacgccacctcctaggttgtctgtcaaagaaagattaggagggaaagtg
gacgaaattagaagaaatagagaagctcgtgttattcacagtacagtagagagagtaaaa
tctcgctctaaaacaccgaagagggaaactcagcattatcgcagagtaacggttgaaaag
gacaggaatagaaaaggagacgcattgagaccggtatcgggtaaaggcgatagaagagta
ttttcagaaaacgtgaaagtcgaaaaacaacactttacttcaaacgagaaaagagaaaat
attgaaaagggagtagaatcgcgtgacagacaagaaaaaaaatcagatcctaaagtttca
catcatgagagaaaaaaatcaacattggacgaagctcattttgaaccagactatgatgaa
actgtagagtctgaaactgaaacgaaagaagaacctcctaaaaaacgagactatatgtcg
ctcagtgataaattgagtgataaaatgaatattaattatgaaaataagaaatctaagcta
gatgttgaatcattaaacttggtgaatttaaaaagaaaacctgaacctgaaactgactct
tccagtgattcagacgactcgtcatcatcttcttcgtctgaagaacgaaaaagaaagaag
aaaaagaaacgtgctaagaagaaaaagaaacgcgctgcaagtgacagtgacagtgattct
gattctagttcagatgatcataagaaaaaaaagaaaaagcgtaaacacaagaaaaaatcc
agcaagaagaagaaaaagtctaaacataagtaa
DBGET
integrated database retrieval system
