Bombyx mandarina (wild silkworm): 114240846
Help
Entry
114240846 CDS
T05882
Name
(RefSeq) zinc finger SWIM domain-containing protein 8-like
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
bman
Bombyx mandarina (wild silkworm)
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bman04121
]
114240846
Ubiquitin system [BR:
bman04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
114240846
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
114240846
NCBI-ProteinID:
XP_028027332
UniProt:
A0A6J2JE53
LinkDB
All DBs
Position
Unknown
AA seq
1515 aa
AA seq
DB search
MPRAQFNVAVTFDRQRISSCNCTCSSTAHWCSHIVAVCLYRIHLPTQVCLRAPVSESLQR
LRRDQLQKFAQYLISELPRQILPTAQRILDELLSAQPNQINTTCGAPDPTAGASAYEYTS
WFLDEKTLHNNINKILVKFCVPAPIVFSDVNYLSTSAPPAASEWSSLLRPLRGREPEGMW
NLLSIVREMFKRNDRNAIPLLEIITEEVMACEQIIIWWYTTKASLVAWGGGTGGKHGGGS
GNSSAQHACSSLCDEVVVLWRLAALNPALAPHERDTLHEQFVQWHSKVLDKVAKNRNNHI
GTSSSSSSSHSRHPRSHSHPPYINGISENEVFPGFTPAMEACFLEWDDYPIPGVTYTKDL
NPLYHSPFTIFRHADKQSENVHQVNSSKAVLNNEMSLSYRLTNPDPSHVHRNLMHKISRI
SVDLAVPGTSSQPCGSGQGPSGGPRDGSGHSDGNHSSVSSEGFCENEEEMQASGGDTDSH
SSSSPSASSDDATRRISQDDSVSDDECQLYYYDSAAARRLELNSASGGGTSSSWTASGWE
CGWEVQFARAEGLQAHGRAREASALGAALARELLARPPVLHAPHDPRRPRKKHAVSPRLC
AASHRLSCLASATLAKCAFLCTVLAEFSEHHELAFRVGLFALEMARPPASTKALEVKLNN
QETELVALLKKLPTGAEQLTLAREKAEQLRDGVLKNRGPALLPIALASFLFEVLVLSATD
KENKHPARLTSDEMLGFEAAVAALGLKANVSEAEHPLLCEGTRRQRGELALTLLSFYKDD
PVKLARIMNKLLDRDIHQLTKGPMVSMYYMNNPRLAAYRSDVSAVPLYPPLYPPHAHAHQ
HQHTIPHPIPIPPPCIPPVPVQVQCPLVSDMERLSLSEGGPSPPSHLHMHTHALHAPHVT
HVSHTTHVPHTTHGQHNTHVSHVTHVPHTPHSSHVAHTTHVLQTTTHVPHTTHVPHTTHL
PHTSHVQHTSHVQHSSHSQHTTHGPHSSHTSHGQPHMSSHVAITRSKDSRYKGKRQYPSV
PNQPSEASAHFMFELAKSVLFKAGGSSSTSLFTQTSCAREHHGPHRGLHMAAFQLGLYAL
GLLNCVSANWLSRTYSSHVSWITGQAMDIGAPAILFLIDAWEGHLTPPEAASIADKASSG
RDVHTVRAAAELALSVLPHAHALNFNEIQRAVLQCKEQSDSMLERACLIVEEAAKGGGVY
PEVLYTVARYWHELYLRQPGDEAEHDEPQYRPAPLPAPLPVPYPIPYPFTYHAYPPPIYQ
LQYGGAGGAQYALPPPYFVRGIAPPPIAVNVSVHSTHAPPLAAPLPPPAPAPPAPPPPAP
ANSSSPSNQAQLRRLLSAYRVGMLALETQARRVHDDRPQNNFDLFRNPPYGEHVKWLLRI
SKQLGTQYLHQFCVSAVNSVVSPFVLYELCVESAHWLARGGPHHMVMQHLRGTLAPLVHK
CQQMYIQCIHQKLYHLNAVEYEEFVSIVLSARTAFQLTPEGNTQFKEWLASLRRSKSCKK
DLWTQLNAALQTNGK
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtgcccaatttaatgtcgcagtaacgtttgacagacagagaatttcgtcatgt
aactgtacttgttcatctacagcacactggtgttcacatattgtagctgtatgtctgtac
agaattcatttgcctacacaagtatgtcttcgtgcacctgtatctgaatcattacaaagg
ttaagaagagaccaactgcaaaaatttgcacagtatcttatatcggaactacctagacaa
atacttccgacggcacagcgtattctggatgaattactgtctgcccaaccaaatcagata
aacacgacttgcggggcgccagatccgaccgctggagcatcagcctacgaatacacatcc
tggttcttagatgaaaagaccttgcataacaatatcaataaaatattagtgaagttttgt
gttccagctcctattgttttcagtgatgtaaattacctgagcacaagtgcaccaccagcg
gcatctgaatggtcatctctccttagacctctaagagggagggagccagaaggaatgtgg
aatttactctctatagttagagaaatgttcaagagaaacgatagaaatgctatacccctg
ctcgagataataacggaagaagttatggcttgcgaacagatcattatatggtggtatacg
acgaaggcatccttagtggcttggggtggtggaacaggaggtaaacatggcggcggttca
ggcaactcatcagcccagcacgcctgttcatctctctgtgatgaggtggttgtactgtgg
cgactcgctgcattgaaccctgcgctcgcgccgcacgaacgggacacactgcacgaacaa
ttcgttcagtggcattccaaagtacttgataaggtggcgaagaatcgtaacaaccacata
ggcacatcctcttcgtcttcgtcgtcacattcgcggcacccgagatcgcattcgcatccc
ccttacatcaacgggatcagcgagaacgaagtctttcccggcttcaccccggccatggag
gcttgtttcctcgagtgggatgattacccaattcccggagtgacctacacgaaagacttg
aatcccttgtatcatagtccgttcactattttccgccacgccgataagcaaagcgaaaac
gttcatcaggtgaattcatcaaaagcagtacttaacaatgaaatgtcattaagctataga
ctgacaaatcccgatccgtctcatgtacacagaaatttaatgcacaaaattagtagaatt
agtgttgatttggctgtgccaggaacatcaagtcagccgtgtgggtccggacaaggaccc
agtggtgggccccgtgatggcagcggtcacagcgatggcaatcactctagtgtatcatca
gaaggtttctgtgagaacgaagaggagatgcaggcgagcggcggcgacacagactcgcac
tcgtcgagctccccgagcgcctcgtccgacgacgccacacggcgcatctcgcaggacgac
tctgtgtccgacgacgagtgtcagctgtactactacgactcggcggccgctagacgcctc
gaacttaactctgcctcaggcggcggcactagttcgtcgtggacggcgtctggctgggag
tgcggctgggaggtgcagttcgcccgcgcggagggtctgcaggcgcacgggcgggcgcgg
gaggcgagcgcgctgggggcggcgctggcgcgggagctgctggcgcggccgcccgtgctg
cacgcgccgcacgacccacgccggccccgcaagaagcacgccgtctcgccgcgcctctgc
gccgcctcgcaccgcctctcctgtctcgcctcggccacgctcgccaagtgcgcattcctc
tgcacggtcctggctgagtttagtgaacatcacgaacttgcattcagagtgggtttgttc
gcattagaaatggcgcgtccgccggcgagcactaaagcgcttgaagtcaagttaaataat
caagagaccgagttggtggctttacttaagaagttacccacaggggcggaacaattgaca
ttggcccgagaaaaggcggagcaactacgcgatggagttctgaagaaccgaggtccagct
cttttgccgattgccttggcgagtttcctattcgaagttcttgtactgtctgcgactgat
aaagaaaacaaacaccctgcacggttaacatctgacgaaatgctcggattcgaagcagcc
gtagcggcgttgggactgaaagcgaatgtttctgaagcagaacaccctctattatgcgaa
ggcacgaggcggcaaagaggagaattagctctaacattgttatcgttttacaaggacgat
cctgttaagttggctagaattatgaataagttgttggaccgcgacatccaccagctgacg
aagggcccgatggtgagcatgtactacatgaacaacccgcggttggcggcgtaccgctcg
gacgtgtcggccgtgccgctgtatccgccgctgtacccgccgcacgcgcacgctcaccag
catcagcatacgatcccgcacccgattccaatcccgccgccgtgcataccgccggtacca
gtgcaggtccagtgcccactggtcagcgacatggaacgtctgtcgttatcggagggtggg
ccgtccccgccgtcccacctgcacatgcacacgcacgctctacacgcgcctcacgtcacg
cacgtgtcacacactacacacgtgccgcacaccacacacggacagcacaacacgcacgtg
tcgcacgtgactcacgtgccccacacacctcattcgtctcacgtggcgcacacgacccac
gtgctgcaaacaacgacccacgtgccccacacgactcacgtaccgcacactacgcacctg
ccgcacacctcgcacgtgcagcacacgtcacacgtgcagcactcgtcgcattcgcagcac
actacgcacggtccgcacagttcgcacacgtcacacggacagccacacatgtcgtctcac
gtagccatcaccagatcgaaggattcaagatataaaggaaaacgtcaatatccgtccgtg
ccaaatcaaccctcggaggcatccgcccattttatgttcgaacttgcgaagtctgtgttg
ttcaaagccggcggttcgtccagtaccagtctattcacgcagacgtcatgcgccagagaa
catcatggaccacatcggggtttacatatggcggcgtttcagttaggcctatacgcacta
ggcctactaaactgcgtgagcgcaaattggctcagccggacgtattcgtctcatgttagt
tggatcacagggcaagcaatggacatcggagctccagctattttattcttaatcgatgct
tgggaaggacatttgacgccgccagaagcggccagtattgctgacaaggcgtcgtccggt
cgcgacgtgcacacggtgcgagcggccgcggagctggcgctgtcggtgctgccgcacgcg
cacgcgctcaacttcaacgagatacagcgtgccgtgttgcagtgcaaggagcagagtgac
tcgatgctcgaacgtgcctgtctcatagtcgaggaagcggccaaaggcggcggcgtgtac
ccggaggtgctgtacaccgtggcgcggtactggcacgagctgtacctgcgccagccgggc
gacgaggcggagcacgacgagccgcagtaccggccggcgcccctccccgcgcccctcccc
gtgccctaccccatcccgtacccgttcacgtaccacgcctacccgcctcccatataccag
ctgcagtatggtggcgcgggaggtgcgcagtacgcattgccgccgccgtatttcgtacgt
ggaatagcgccaccgcccatagctgtcaacgtcagcgtgcattccacgcacgcgcccccg
ctagcggcgccgctgcccccgccggcccccgcgccccccgcgccgccgccgcccgcgccc
gccaacagcagctcgcccagcaaccaggcacagctgcgccgcctgctctccgcctacagg
gtcggcatgctcgccctcgaaactcaagcgaggcgcgtacacgacgatagaccccagaac
aatttcgatttgttcagaaacccgccgtacggcgagcacgtgaagtggttgttgcggatc
tcgaagcagctgggcacgcagtacctgcaccagttctgcgtgagcgccgtgaactcggtg
gtgtcgcccttcgtgctgtacgagctgtgcgtggagtctgcgcactggctggcgcgcggc
ggcccgcaccacatggtcatgcagcacctgcgcggcacgctggcgccgctcgtgcacaag
tgccagcagatgtacattcagtgtatacatcaaaaattgtatcatctgaacgcagtcgag
tacgaagagttcgttagcatcgttctgtccgcccgcacggccttccagctcacccccgaa
gggaacacgcagttcaaggaatggctggcttcattgcgcaggtctaaatcgtgcaagaag
gacctgtggacccagctcaatgcggccctgcagacgaacggcaaatga
DBGET
integrated database retrieval system
