Bombyx mandarina (wild silkworm): 114241214
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Entry
114241214 CDS
T05882
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03022
Basal transcription factors
bman03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114241214
09124 Replication and repair
03420 Nucleotide excision repair
114241214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bman03021
]
114241214
03400 DNA repair and recombination proteins [BR:
bman03400
]
114241214
Transcription machinery [BR:
bman03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114241214
DNA repair and recombination proteins [BR:
bman03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114241214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
114241214
NCBI-ProteinID:
XP_028027799
UniProt:
A0A6J2JH62
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MTTSSEDVLLSVNCVRYKKGDGTLYVMNQRLAWMLEHRDTVAVSHKYADIKTQKISPAGK
AKIQLQVVLHDGTCSTFHFVNPGGPEAQAKDRDQVMVLLQNLLPKFKRQIDGELEMKSKL
LSLHPTLKHLYEDLVISKVINSEEYWNTPTLKQYTESSNIKQEAGVSGAFLADIQPQTDG
CNGLKYNLTQDIIDAIFKTYPAVRKKHIDYVPNKMTEAEFWTKFFQSHYFHRDRIASSSS
KDLFGECAKLDDHAIASAMRHTTLDLTVDLNKFIEHVPLLPTEEEASNEKDRSDNNSIHR
NMIKRFNQHSIMVLKASQKSNSSNNSNSSSSKTSNNNNKVIENGVKDTNGVSKRPAEHST
EPIEKKKRILEQIHYEDLVADQGNDDVQELKLSKVERYLLGPSYQISQTSVQTSHPPPLS
ALASVCQAWSSGQQCQRPARVSAGAAVGALGELSPGGALMRHHHAASMAQLIPADVKAEL
QRLYASCGELARELWRSFPQPGAPPANEQDAAPRATMFYDALLRFRNLKLRPFEEKMLRD
LTPLATTLTKHLNQIIDTACAKYVLWQQRQAKIR
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatcatccgaagatgttttgctcagcgtgaattgcgtacgctataagaaggga
gacgggacactgtatgtaatgaatcaaagattagcatggatgttggaacacagagacaca
gtcgcagtatctcataaatatgctgatatcaaaacacaaaaaatttcaccagctggcaag
gctaaaatacagcttcaagtggttttacatgatggcacatgttctacatttcactttgtt
aacccgggtggcccagaggctcaggccaaagacagagatcaagtgatggtattactacaa
aacctcttaccaaagttcaaaagacagattgatggtgaactagaaatgaaatctaaattg
ttgtcattgcatccaacattaaaacatttgtatgaggatttagttatatctaaagttatt
aatagcgaggaatactggaatactcctactttgaaacaatatacagaatctagtaacatt
aaacaggaagctggtgtgtcaggtgcattccttgctgatattcaaccacagacagacggt
tgcaatggcttgaaatacaatctaactcaagatatcatagatgctatattcaaaacatat
ccagcagtcagaaagaaacatattgattatgtacccaataaaatgacggaagctgaattc
tggacgaaattctttcaatcacattattttcacagagatcgaatagcttcgtcatcgagc
aaggatttatttggagaatgtgctaaattagatgaccacgctattgcttcagcaatgaga
cacacaacactagatcttacggttgatttgaataagttcatagagcacgttccactgtta
ccgactgaagaagaagctagcaatgagaaggatcgatctgataataattctatacacaga
aatatgattaaacgtttcaaccaacactctattatggtgctcaaagctagtcaaaaatca
aattctagtaataatagtaatagcagtagtagtaaaacatcgaataacaacaataaagtt
atcgaaaacggtgtcaaagatacaaatggtgtctcaaagagaccggccgaacacagtaca
gaaccgatagaaaagaaaaaacgaatattagagcagatacactacgaggatctagttgca
gaccagggaaatgatgatgtacaggaattaaaattgtctaaggtagaaagatatttatta
ggaccgtcgtatcagataagtcagacgagtgttcagacgagccacccgccgccgctgtcg
gccttggcgtccgtatgtcaggcgtggtcgagcggccaacagtgccagcggccggcgcgg
gtgagcgcgggcgcggctgtgggcgcgctgggggagctcagtccgggcggcgcgctcatg
cggcaccaccacgccgcctccatggcacaactaataccggcggatgtgaaggcggaactt
cagaggctgtacgcgtcgtgcggcgagctggcgagggagctttggcgcagcttcccgcag
ccgggcgcgccgccagccaacgagcaggacgcggcgccgcgggcgaccatgttctacgac
gcgctgttgcggtttaggaatttgaaacttaggccattcgaggagaagatgctccgtgac
ctgacgccgctggcgacgactctaacgaaacatttgaaccaaataatagacacggcctgc
gctaagtacgtgctctggcaacagaggcaagcgaagatacggtag
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