Bombyx mandarina (wild silkworm): 114241405
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Entry
114241405 CDS
T05882
Name
(RefSeq) ATP-dependent RNA helicase DDX18-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
bman
Bombyx mandarina (wild silkworm)
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bman03041
]
114241405
03009 Ribosome biogenesis [BR:
bman03009
]
114241405
Enzymes [BR:
bman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114241405
Spliceosome [BR:
bman03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114241405
Ribosome biogenesis [BR:
bman03009
]
Eukaryotic type
90S particles
Helicases
114241405
Pre-60S particles
114241405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CMS1
Helicase_C_2
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
114241405
NCBI-ProteinID:
XP_028028033
UniProt:
A0A6J2JFG1
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MSANDIYPKCTFSMLKGKIDCRILSTLRQMGFQRPTRIQAQAMPYLLQQKDLIGAAKTGS
GKTLAFLIPAVDQLIKLGFTLKHGTGCIILSPTRELALQTFEVLKRLLTDIDISHCLIVG
GEKKNKDVSKLQKGMNIVVSTPGRLLDHLQTTNTFNCKNLKCLIIDEADKLLESGFEKHV
NGILEKLPNDKQTVLFSATIDDRVKNLARLALRSDPIWITVDDDAKRSTVSGLQQGYYIC
PVEKRMAWLYKMLKKCKKLKVMVFFSSCKSVDFHYEFFRVNCKAIVSSIHGRQSQAKRKE
AYHGFVEAQNGALFCTDVAARGLDIPSVDWIVQYDPPTDPKEYIHRVGRTARGMNSKGNA
VILLRPEEEEFVKFLENEKVYLDKYTFGDPPADIQEFLQKLIKENGVMKVLARKAFLSFL
RCYKNHPLKSIFNIKNLDLQLASKAFGFDETPHVDFLRSK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctaacgatatttatcctaagtgtacattttccatgctcaaaggtaaaatcgac
tgtagaattctttctacgttaagacaaatggggtttcaaagacctacacgtatccaagct
caggcaatgccctatttattacaacagaaggaccttataggtgcagctaaaacaggaagt
ggaaaaactttagctttcttaatacctgctgtagatcaacttattaaacttggatttaca
ctaaaacatggtacaggttgcatcattctatctccaacaagagaattagctctgcagaca
tttgaagtactaaagagactcttaacagatattgatatttcacattgcttgattgttgga
ggtgagaaaaaaaataaggatgtgtccaagctacaaaaaggcatgaatattgtagtgagt
actccgggaagacttcttgatcatttacaaaccacaaacacatttaattgcaaaaatctg
aaatgtcttataattgatgaagctgataaactgttagaatctggctttgaaaagcatgta
aatggaatactggaaaaacttccaaatgataaacaaaccgttctttttagtgcaacgatt
gatgatagagttaagaatctagctagactggcgttgaggagcgatccgatctggataact
gttgatgatgacgcaaagcggtccactgtctctggattgcaacaggggtactacatttgc
ccagtagaaaaaagaatggcttggttgtacaagatgctgaagaagtgcaagaaactgaaa
gtcatggtgtttttctcatcgtgtaaatcggtcgattttcattatgaattctttagagtg
aattgtaaggcaatcgtctctagtatacacggcagacaaagccaggccaaaagaaaagaa
gcctatcacggtttcgtggaagcacaaaacggtgcgttgttctgtaccgatgtcgccgcg
agaggactggacataccgagcgtcgattggattgtccaatacgaccctcccactgaccct
aaggagtacatacatagagttggacgtaccgcccgaggtatgaacagcaaaggcaatgca
gtgatattacttagaccagaggaagaggaattcgtgaagttcttagagaacgaaaaagtt
tatttagataaatacacttttggcgatcccccggcagacatacaagaatttcttcaaaaa
ctaataaaagagaacggagttatgaaagttttggcgagaaaagcttttctttcgttttta
cgttgttataaaaatcatccactgaagagtatttttaatatcaaaaatctggatctacag
ttggcatcaaaagcttttggatttgatgaaacgcctcatgtcgatttcttacgttctaaa
tga
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