KEGG   Bombyx mandarina (wild silkworm): 114241506
Entry
114241506         CDS       T05882                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
bman  Bombyx mandarina (wild silkworm)
Pathway
bman03013  Nucleocytoplasmic transport
bman03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bman00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114241506
  09122 Translation
   03013 Nucleocytoplasmic transport
    114241506
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bman03019]
    114241506
   03041 Spliceosome [BR:bman03041]
    114241506
Messenger RNA biogenesis [BR:bman03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     114241506
Spliceosome [BR:bman03041]
 Complex C
  Other components
   EJC/TREX
    114241506
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    114241506
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 WD40_Gbeta EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_TEP1_2nd eIF2A Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 Beta-prop_NOL10_N RMC1_N Beta-prop_HPS5 PAC11 WD40_MABP1-WDR62_1st Tricorn_2nd Beta-prop_TEP1_C DSE1_N WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N TRM82_WD WD40_RFWD3 NBCH_WD40 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_SCAP Cytochrom_D1 Beta-prop_ELP1_1st Beta-prop_Nup120_160 PD40 DPPIV_N Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 114241506
NCBI-ProteinID: XP_028028149
UniProt: A0A6J2JI69
LinkDB
Position
Unknown
AA seq 333 aa
MITKAMKDSKHSQAPIEDLSELRSYFASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFD
KSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAA
TIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTKTYKVVTEEQFNFEVNEISWNNTSDL
FFLTNGLGCVHIMTYPSLELQTVLKAHPGTCICIEHDPTGRYFATGSADALVSLWDVNEL
ACLRVFSRLEWPVRTLSFSFDGRLLASASEDHIIDIGDTETGEKVAEIPVSASTFTVSWH
PARYLLAFACEDKEPPERKRDLGNLKLWGLSSS
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgataaccaaagctatgaaggattcaaagcattcgcaagctcctatagaagatttaagt
gaattacgtagttattttgcgtcacacaatactacacgcgagtacattgcacattcatcc
aaagtacattccgtgggctggtcctgtgatggtagaaagctggcttctgggtcattcgat
aaaagcgttgcaatatttaatttagagaggagcagattgagtcaagattttattttcaaa
ggccacacaggctctgtagatcaactctgctggcatgcgtcacatcctgatctcctgagt
acagcgagcggagacaaatctgttaggatatgggatacacgatcacacaaatgcgcggcg
acaatcccaaccaaaggtgaaaacataaatatagcatggtctcctaatggcaacaccatt
gcggtagggaacaaggaagatttagtttcatttatcgatacaaaaacttataaagtggta
acagaagaacagtttaactttgaagtgaacgagatatcatggaataatacatcggacttg
ttcttcctcaccaacggactgggatgcgtacatattatgacttatccatctctagaattg
cagacagtactgaaggcgcatcctggtacgtgtatctgcatcgagcacgacccaaccggt
agatactttgctactggatcagccgatgctctggtctcactatgggatgtcaatgaactg
gcctgcttaagagttttctccaggttggagtggccggtccggacgctgtcgtttagcttc
gacggcaggctgctggcgtccgcgagtgaggaccacatcatcgacatcggagacacggag
acaggggagaaagtagcagagatcccggtgtcggcgtccacgttcacggtgtcgtggcat
cccgcgcgctacctgctggccttcgcctgcgaggacaaggagccgcccgagaggaaacgg
gatttggggaatctcaaactgtggggactctctagttcttag

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