Bombyx mandarina (wild silkworm): 114241506
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Entry
114241506 CDS
T05882
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03013
Nucleocytoplasmic transport
bman03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114241506
09122 Translation
03013 Nucleocytoplasmic transport
114241506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114241506
03041 Spliceosome [BR:
bman03041
]
114241506
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114241506
Spliceosome [BR:
bman03041
]
Complex C
Other components
EJC/TREX
114241506
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114241506
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
eIF2A
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
Beta-prop_NOL10_N
RMC1_N
Beta-prop_HPS5
PAC11
WD40_MABP1-WDR62_1st
Tricorn_2nd
Beta-prop_TEP1_C
DSE1_N
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
TRM82_WD
WD40_RFWD3
NBCH_WD40
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
Beta-prop_SCAP
Cytochrom_D1
Beta-prop_ELP1_1st
Beta-prop_Nup120_160
PD40
DPPIV_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
114241506
NCBI-ProteinID:
XP_028028149
UniProt:
A0A6J2JI69
LinkDB
All DBs
Position
Unknown
AA seq
333 aa
AA seq
DB search
MITKAMKDSKHSQAPIEDLSELRSYFASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFD
KSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAA
TIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTKTYKVVTEEQFNFEVNEISWNNTSDL
FFLTNGLGCVHIMTYPSLELQTVLKAHPGTCICIEHDPTGRYFATGSADALVSLWDVNEL
ACLRVFSRLEWPVRTLSFSFDGRLLASASEDHIIDIGDTETGEKVAEIPVSASTFTVSWH
PARYLLAFACEDKEPPERKRDLGNLKLWGLSSS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgataaccaaagctatgaaggattcaaagcattcgcaagctcctatagaagatttaagt
gaattacgtagttattttgcgtcacacaatactacacgcgagtacattgcacattcatcc
aaagtacattccgtgggctggtcctgtgatggtagaaagctggcttctgggtcattcgat
aaaagcgttgcaatatttaatttagagaggagcagattgagtcaagattttattttcaaa
ggccacacaggctctgtagatcaactctgctggcatgcgtcacatcctgatctcctgagt
acagcgagcggagacaaatctgttaggatatgggatacacgatcacacaaatgcgcggcg
acaatcccaaccaaaggtgaaaacataaatatagcatggtctcctaatggcaacaccatt
gcggtagggaacaaggaagatttagtttcatttatcgatacaaaaacttataaagtggta
acagaagaacagtttaactttgaagtgaacgagatatcatggaataatacatcggacttg
ttcttcctcaccaacggactgggatgcgtacatattatgacttatccatctctagaattg
cagacagtactgaaggcgcatcctggtacgtgtatctgcatcgagcacgacccaaccggt
agatactttgctactggatcagccgatgctctggtctcactatgggatgtcaatgaactg
gcctgcttaagagttttctccaggttggagtggccggtccggacgctgtcgtttagcttc
gacggcaggctgctggcgtccgcgagtgaggaccacatcatcgacatcggagacacggag
acaggggagaaagtagcagagatcccggtgtcggcgtccacgttcacggtgtcgtggcat
cccgcgcgctacctgctggccttcgcctgcgaggacaaggagccgcccgagaggaaacgg
gatttggggaatctcaaactgtggggactctctagttcttag
DBGET
integrated database retrieval system