Bombyx mandarina (wild silkworm): 114241919
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Entry
114241919 CDS
T05882
Name
(RefSeq) uncharacterized protein LOC114241919 isoform X1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03020
RNA polymerase
bman03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114241919
09124 Replication and repair
03420 Nucleotide excision repair
114241919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bman03021
]
114241919
03400 DNA repair and recombination proteins [BR:
bman03400
]
114241919
Enzymes [BR:
bman01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114241919
Transcription machinery [BR:
bman03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
114241919
DNA repair and recombination proteins [BR:
bman03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
114241919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAN_1
DUF2125
RSS_P20
Motif
Other DBs
NCBI-GeneID:
114241919
NCBI-ProteinID:
XP_028028706
UniProt:
A0A6J2JGR9
LinkDB
All DBs
Position
Unknown
AA seq
1332 aa
AA seq
DB search
MRVYVTLLACLFVHNTFGTRVILVENAPTCFRRVLVGRRALRSHVRRVVSGQSLEDCKTE
CAVEHRFPCESFNYRLDPSFRGKSLCELMTKPIEAFDLRRDFAEDKDYDFYERDRNSLEP
YCPDSLRGQGLLHSGYLTTQNRAEDRWGGGYVGSYGQRKHDDTNFIPYQIGIRRKNDPRE
HENWGQYGGYYGGYDYYKDRNDYYKSQSHWNLNNAIDRAYSSEGVRPLTTIIRPHKSMAD
FDYNKLAKDTPWNERYGSWKREKWNSSGSSFNSFDYGGYHHYGPTFELEGRSDENDPKDC
SSRRSAGMSLSSGSIRRSLYAKNVVECEASCFEEREFKCVSYSYRYSNSRGSDNCFLSER
PYRGLEMSADSSSDVYAMPQSHDCVNVNYDPWVESECFWHVRSGAAVTGAAVRAALTVAG
LGACEAECIRASGFFCRGFSFRFEAPITGEDLENCILTSSPPASLPPSRAAHHELYARGR
AGRGCQPALHDAHPEPGTQCYLQYDSAAQLSPSAVRGRARVRDEGACGVACTDAPFRCLS
YSFKNNAPPDRDNCFLSEIRLFDLQRGVDYVHSTDDWLFAFDLFNGQCWRKIHGPDYDEP
THELPRPILTSGSEESYPVSGPSGPGYSESDPPYISEGHIKPFKPTIYKPVYPEPSGPDF
EPHYETSGHFYKPTYSIEPSGSYKPGFAEPSGPDFKPHFEPVGPVLKPVYPLNEPPFESS
RPGLKPLYPVQPNFKPRPVEPSVYRPEYPVQKPGYVPKPAYRPPEHDIPFVPTSPPGYRP
GRPGFNPGSKPGFEGDREDGIAVSWRHYTVSGFPCRAGTSCAQNHVAGHWACEPEGGEIG
SWDYCCAPTHRCGYSEGFNKPWCYVGPESDQWRPCSEKYYPYHQHNVPHPSQANRDETSQ
PSGPSRPHGNRLGPYLSEADRRYWDELYKNGPQAYYDRYGNPLPGYTRVPTSDPPHIKPE
YSRPAPGSWAPAQGGGTRDGLGVPRYWPVAYLHKGPPPNMTYFRYNETTTTEMPKPAESR
DLPDDRDSPDQQTLIDKPKIIDNHRGEKKRNISEHDEEFHIDIDKTTTAKTVSEVTEVIE
RVNKSETESTTSDKDEDKMDLIDGIDDKLLDFSKSIEVFDIEDAKKSAKADLKTLRAEER
QIEEIGRLLASRRDGKVVLEKRSQKELASKNIAVDEDLLDFNFGNKFPVERRGVVRKVTK
DEIERDRNTDRSLEVSETTFVRPPRVLATTENIRKAIVNGKIFYDATIREQRDVLMNATR
RSKSLRPLEDRAPSVINSASFGKKKIIKTRNVNPVRRVRRVYRKRYNPEEVRRRLLERDR
AKESSVDSSRKI
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtttatgtgacgttgcttgcgtgtctgtttgttcataacactttcgggacccgg
gttatcctcgtggaaaacgcaccgacatgctttcgccgtgtattggttggaaggagggcg
cttcggagtcacgtcaggagggtcgtgtctggacagtcgttggaggattgcaaaacggag
tgcgctgtagaacacaggttcccgtgcgagagttttaattacagattggacccctcgttc
cgaggcaaaagcctctgcgagctcatgacaaaaccgatagaagctttcgatctccgaaga
gacttcgctgaagacaaagactatgatttctacgaacgcgaccggaatagcttggaacct
tattgccctgatagtctgcgcggacaaggattgctgcattctggttatctgaccactcag
aatcgggccgaagacagatggggtggaggatacgtcggttcttatggacagaggaaacat
gatgatacgaacttcattccttatcagattggtataagaaggaagaacgatcccagagaa
cacgagaactggggacaatatgggggctattatggaggctacgactattacaaggacaga
aacgactactacaaatcgcagagccattggaacttaaacaacgcgatcgacagagcctac
agctctgagggagtcaggccattgactaccatcatcaggccccataaatcgatggcggat
ttcgactataacaaactagcgaaggataccccgtggaacgaaagatacgggtcttggaaa
agagagaaatggaacagctcaggatcgtcatttaatagcttcgattacgggggctaccat
cattacggacccacgtttgagctggaaggcagaagcgacgaaaatgatccgaaagattgc
tcgtctcggagaagcgccggtatgtctctgagtagtggttcgataaggaggtcgttgtac
gccaagaatgtggtggaatgcgaggcatcgtgctttgaggagagggagtttaaatgcgtc
tcctacagctacagatactcaaattcgcgcggctccgacaactgctttttgagcgaaagg
ccgtacagaggcttggagatgtccgcggacagcagctccgatgtgtacgcgatgccacaa
agccacgactgtgtcaacgtaaattatgacccttgggttgaaagtgagtgcttctggcat
gtgaggtctggagctgcggtcaccggggccgcagtgagggccgccctcaccgtggccggt
ctgggagcgtgcgaggcggagtgcattcgggcctccgggtttttctgcagaggttttagt
ttcaggttcgaggccccgattacaggagaggacttagagaactgtatcctgacttcgtcc
cctcccgcctcgctgcccccaagccgtgcggcccaccacgagctgtacgcgcgggggcgc
gcggggcggggctgccagcccgcgctgcacgacgcccaccccgagcccgggacacaatgc
tacctccagtacgacagcgcggctcagctatccccctcggccgtgcgggggcgcgcgagg
gtccgggacgagggggcgtgcggggtggcgtgcaccgacgcgcccttccggtgcctgagc
tactccttcaaaaataacgcaccaccggaccgcgacaactgcttcctctccgagataaga
ctgttcgatcttcaaaggggagtggactacgtacattccactgacgactggctcttcgct
ttcgatctattcaacgggcagtgctggaggaagatccacggaccggattatgatgagcct
acacacgaacttccaagaccgatcctgacatctggttctgaagagtcctacccagtgtca
ggtccctctggtcctggttactctgaatcagatcccccttacatatcagaaggacatata
aaaccgtttaaaccaacaatatacaaaccggtatatcctgaaccaagcggtcccgatttc
gaaccacattacgaaactagtggacatttttataaaccaacgtattctattgaaccaagt
ggatcatacaaaccgggttttgccgaaccaagtggtccagattttaaaccacatttcgaa
ccagttgggccggtacttaaaccggtataccctttaaatgaacctccatttgaatccagt
aggcccggtcttaagcctctctatccggtgcagccaaatttcaaaccgcgtccggtcgaa
cctagtgtctatagacccgaatatccggttcagaaaccgggatacgtgcccaaaccggcg
taccgacctccagaacacgatataccctttgtccctaccagtccacccgggtaccgacct
ggacgacctgggttcaatcctggctcaaaaccgggctttgaaggagacagggaagatgga
attgccgtatcttggcgccactacacagtgtccgggttcccctgccgagcggggacttcc
tgcgcgcagaaccacgtcgccggccactgggcttgcgaaccggagggtggagaaatcgga
tcgtgggattactgctgtgcgccaacgcatcgctgtgggtacagcgaaggtttcaataag
ccatggtgctacgtgggcccagagagcgaccaatggcgaccgtgtagcgaaaaatactac
ccttaccaccaacacaacgtgccgcatccctcgcaagcaaacagagacgaaacctctcaa
ccttcgggtccgagccgtccacacggaaatagacttggtccgtatctatctgaagctgat
agaagatactgggatgaattatacaaaaacggtcctcaggcgtattacgatagatacggg
aatcccttaccagggtatacaagagtaccgacatcagatccgccgcatataaaaccagaa
tattctcgacctgctcccggatcctgggcgccagcacagggaggaggtacgcgtgatgga
ctcggtgtgccgaggtactggccggtggcctacctacacaaaggtcctccaccaaacatg
acttattttagatacaacgaaacgacaaccactgaaatgccaaaacctgcggaatccaga
gacctaccagacgatagggactcgccagaccaacagactcttatcgacaaaccaaaaatc
atcgacaaccatagaggcgagaagaaacgtaacattagcgaacacgacgaagaatttcat
atcgacatcgacaaaacgacaacagctaaaactgttagtgaagtcactgaagtcattgag
agagtaaataagagcgagacagaaagcacaacttctgacaaggacgaagataaaatggat
cttatcgatggaattgatgataaactattagatttctctaagtctattgaagtatttgat
atagaagacgctaagaagagtgcgaaggcagatcttaaaactctacgagcggaagagaga
cagatagaagagataggacgactgttggcttcaaggcgcgacgggaaagttgtcttggaa
aagcgatcgcagaaagaattggcctcaaagaacattgcggtcgacgaagatttgctagac
ttcaatttcgggaataaattcccagtagaaaggagaggggtcgtacggaaagtgactaaa
gatgaaatagagagggacaggaataccgatagaagcctagaagtgagcgagacgacgttt
gttagaccaccaagagtactagctacaactgaaaacatacgcaaagcaattgtcaacggt
aaaatattttatgatgctacaatcagagagcaaagggatgtcctaatgaatgccactcga
agatccaaatctctgaggcctctggaagacagagccccatcagtgattaattctgctagt
ttcggaaagaagaaaattataaaaacaagaaatgtaaatcctgtcaggagagttagaagg
gtttataggaaaagatataacccggaggaagttagaaggagactgttggagagagataga
gctaaagagagttctgttgatagcagtaggaaaatttaa
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integrated database retrieval system
