Bombyx mandarina (wild silkworm): 114242285
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Entry
114242285 CDS
T05882
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114242285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bman03041
]
114242285
03009 Ribosome biogenesis [BR:
bman03009
]
114242285
Enzymes [BR:
bman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114242285
Spliceosome [BR:
bman03041
]
Complex A
U1 snRNP components
U1 related factors
114242285
Complex B
114242285
Ribosome biogenesis [BR:
bman03009
]
Eukaryotic type
Pre-60S particles
Helicases
114242285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114242285
NCBI-ProteinID:
XP_028029193
UniProt:
A0A6J2JIU3
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MYDDRRGGRGGRGGSRGGRGSSRGGRGSDRSQERGPSRFSGGRGRDGGRGGRDGGRGGRD
SGRGFGRMGNRDDRSNFKNDQPGGNLRKIHWDTVTLTPFQKNFYVPHPNVQRRTQSEIEA
YRSQHQITVKGRDVPAPSIFFEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMV
GIAQTGSGKTLAYILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQTLIGMKAIAP
ELMDDPAPMEIVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLIDFLEK
ETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNLAEEFL
HDYIQINIGSLELSANHNILQIVDVCEEWEKNDKLITLLTEISSEEETKTIIFAETKRRV
DDICKAINRAGWRALAIHGDKNQQDRDYVLNQFRHHAAAILVATDVAARGLDVEDVKFVI
NYDYPNNSEDYVHRIGRTGRSQNTGTAYTLFTPNNSAKARDLMSVLQEANQVVNPKLLEL
AQCGMGFKGKFGRSRYRDDGGRGRDGGSRGGRGGRGGGRGGYGDRGSRWDNSNDNQNSYN
DYNRQSFGNREGGYRGRGRGRGGHDAPQTYYNMYSQPPPAH
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgatagacgtggtggccgtggtggaagaggtgggagtcgcggagggcgagga
tccagccgcggtggtcggggtagcgacaggtcacaagagcgcggacctagtcgatttagc
ggaggtcgtggtcgggatggtggacgcggcggtagggatggcggccgtggaggacgagac
agcggcaggggttttgggagaatggggaatcgggatgatcgctccaatttcaaaaatgat
cagcctggcggtaaccttcgaaaaattcactgggacaccgtaacgctcacaccattccag
aaaaatttctatgtccctcatccgaatgttcaacgtcgaactcaaagcgaaattgaggcc
tatcgtagccaacatcagataactgtgaaaggtcgagacgtgcctgcccctagcatattt
tttgaagagggtggtttccctgactatgctatgaaagagattttaaaacaaggtttcccg
aaccccactcctattcaagcacagggctggccaatagctctctctggccgtgacatggtg
ggcatagcccaaactgggtcaggcaaaaccttggcatacattttaccagccatagtacac
ataattaatcaaccgcgtctgctaagagatgatggtccaatagtccttgtgttggctcca
acaagagagttagcccaacaaatacagcagaccttgattgggatgaaagcgatcgcccct
gagttgatggacgatccagcccccatggaaattgttgccaatgaatttggtcaaagtatc
cacgtgcggaacacttgtatctttggtggtgctccaaagggaccacagggcagatgtctt
gagaggggagtggaaattgttattgctactcctggtagactcattgattttttggagaag
gagacaacgaacttgcgccgatgcacttatttggtgctggatgaggctgatagaatgttg
gacatgggcttcgagcctcagatcaggaagattattgaacagattagacctgatagacaa
gtattgatgtggtcagctacgtggccccgagaagtacagaatctagctgaagagttcctg
catgactacatccagatcaacattggttctctcgagctctcggccaaccacaacatcctc
cagattgttgatgtttgtgaggaatgggagaagaatgataaattgattacattgcttact
gagatatcttcagaggaggaaaccaaaactattatatttgctgaaaccaaaaggagggtt
gacgacatatgtaaggcgataaaccgtgccggctggcgcgccctcgccatccacggggac
aagaaccagcaggaccgcgactacgtgctgaaccagttccgccaccacgccgccgccata
ctggtcgccaccgacgtcgccgccaggggactcgatgtggaagatgtgaagtttgtgata
aactatgattatccaaataattctgaggattacgtgcatcgtatcggcaggacgggacgg
tcccaaaacaccggcacggcctacacactcttcactcctaataattcagcaaaggctaga
gatttgatgtcagtacttcaggaagccaatcaagttgtgaatccgaaactactagagttg
gcgcaatgtggcatgggattcaaaggaaaattcggtcgttcaagataccgagatgacggc
ggcaggggacgcgatggaggctcacgcgggggacgcgggggtcggggtgggggccgtggt
ggctacggggacagaggttcacgctgggacaacagtaatgacaaccaaaactcctacaac
gactacaacaggcagagtttcggtaatagagagggtggataccgcggcaggggccggggg
agggggggacacgacgcgccacagacctactacaacatgtactcacaaccgccgcccgct
cactag
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