Bombyx mandarina (wild silkworm): 114242497
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Entry
114242497 CDS
T05882
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03013
Nucleocytoplasmic transport
bman03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114242497
03015 mRNA surveillance pathway
114242497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114242497
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114242497
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
114242497
NCBI-ProteinID:
XP_028029472
UniProt:
A0A6J2JKB9
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MTSVVRRREHDDSGEYSDASQDIEHNNSLNEGPPESDYDSQGSDSDHSERDPEAQEGERR
VDDDEDRSNPQYIPKRGTFYEHDDRTAASGEESVNTTSETASEKKEGSETTTERRRPPRK
SDIVNKWTHDKYNENEQMPKSRDELVAIYGYDIRNEDAPPHARRNRRYGFRHWRRGPNKY
TRTWEDEEAYRRQNALPLRKPPNPEDFPELEASAKKPGRKVRAPRPRSKSQPAAGESPER
AAQLRRNASIKTAKPKPPFTKTTPPKNLKPQDKKLPALETLTITAPANNNNSNNNSQGQS
QRKVSAMVAQQRPVPTDINKKKPLPGQNQQPSSPAPNKSPPLQGSQTKLQNQTSHPHPQQ
TTGAEPRGGSKRYSSLRQRPLAEPYTPQPQPQTQPQTPAQTSSPGAAQTQQPHRYAGQSE
FTAGPAAPAPHAPHLAHQVRCTPNAPAPGHTPPPLQALPQQQQQQQVRLGIIDQPQQVVS
HPHHPIHNIQPQPHTINQLPPAQGYAPPAMMPAQYMQQSGAAPVFGGGLFPQGAAPPYPL
YPHHNYATQTGGVTYYNCAEQDQQPRAQRRPTAAIPIVKPHASERAANSTEKDNIDRIVE
NMFVRKPWPATHGADKEKSSEARSSQESGSKESSQPDSLTSSSISTDSRPSDAKEEKEKD
SRENETEQPPEA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgtggtacgaagacgggagcacgacgattcgggagaatattcagatgcttct
caggacatcgaacacaataactcgttgaacgaagggccgcccgagtccgattatgactcg
cagggtagcgattctgaccactctgaacgggatccagaggcacaggaaggtgaacgcaga
gttgatgatgatgaagataggagcaatcctcagtatatccccaagagaggaacattctac
gagcatgatgaccgaaccgcagccagcggcgaggaatctgtcaacacgacatccgaaacg
gcttcagagaaaaaggagggctccgagacgacgaccgaacgacgccgccctccgcgaaaa
tctgacattgtcaataaatggacacatgataaatacaacgagaatgaacagatgccgaaa
tcacgtgacgagctggtagcgatttacgggtacgacatacgcaacgaagatgcccctcct
cacgcgagacgcaacagaagatatgggtttcgacattggcgtcgtggacccaacaagtac
acacgtacctgggaagacgaggaggcgtaccgaagacagaacgcgttgccgctgagaaaa
ccaccgaaccccgaggacttccctgaacttgaagctagcgctaagaaaccagggaggaag
gttcgcgccccccggccccgctccaagtcgcagccggcggcgggcgagtccccggagcgc
gccgcccagctccgccggaacgcctccatcaaaaccgcgaagcccaagccgccgttcaca
aagacgacgcccccgaagaacctgaagccgcaggacaagaaattaccggcgctcgaaact
ttgacaatcaccgccccggcgaacaataacaatagcaacaataacagccaaggtcagtcg
cagcggaaggtgagcgctatggtggcgcagcagcggccagtgcccacggacatcaacaag
aagaagccgcttcccggccagaaccagcagccctcgagtccagcccccaacaagtcgccg
cccctgcaaggctcccaaacgaaactacagaaccagacgtctcaccctcacccgcaacag
accactggtgccgagccccgcggcggcagcaagcgctacagcagcttgaggcagcgcccc
ctggcggagccctacacgcctcaaccgcagccgcagacacagccgcagacccccgctcag
acctcaagcccgggggcagcgcagacccagcagccgcacagatatgccggccaaagcgag
ttcaccgccggcccggccgcgcccgcgccgcacgcgccgcacctcgcgcaccaggtgcgg
tgcaccccgaacgcgccggcccccggacacacgccgccgcctctccaggctctgccacaa
caacaacaacaacagcaggtcagactggggatcattgatcagccgcaacaagtcgtgtca
catccccaccatcctatacacaacatacagccgcagcctcatacgataaatcaattacca
cccgcccagggatacgcgccccccgccatgatgcccgcgcagtacatgcagcagagcggc
gcggcgcccgtgttcggcggcgggctgttcccgcagggcgcggcgcccccctacccgctc
tacccgcaccacaactacgcgacccaaaccggtggggtgacgtattacaactgcgcggag
caggaccaacagccgcgcgcccagcggcgccctacggcggccatacccatcgtcaagccg
cacgcctcagaaagagctgcgaattcaaccgagaaagacaacatagatcgtatcgtcgag
aatatgttcgtgaggaagccctggcccgcgacgcacggagccgataaagagaaatcatcg
gaggcccggagttcgcaagagtccggcagcaaggagtcctcgcagcccgacagccttacg
tccagctccatctcaacggactctagaccttcggacgccaaggaagagaaagagaaggac
agccgagagaacgagacggaacaaccgcccgaggcctga
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