KEGG   Bombyx mandarina (wild silkworm): 114242497
Entry
114242497         CDS       T05882                                 
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
bman  Bombyx mandarina (wild silkworm)
Pathway
bman03013  Nucleocytoplasmic transport
bman03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bman00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114242497
   03015 mRNA surveillance pathway
    114242497
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bman03019]
    114242497
Messenger RNA biogenesis [BR:bman03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     114242497
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 114242497
NCBI-ProteinID: XP_028029472
UniProt: A0A6J2JKB9
LinkDB
Position
Unknown
AA seq 672 aa
MTSVVRRREHDDSGEYSDASQDIEHNNSLNEGPPESDYDSQGSDSDHSERDPEAQEGERR
VDDDEDRSNPQYIPKRGTFYEHDDRTAASGEESVNTTSETASEKKEGSETTTERRRPPRK
SDIVNKWTHDKYNENEQMPKSRDELVAIYGYDIRNEDAPPHARRNRRYGFRHWRRGPNKY
TRTWEDEEAYRRQNALPLRKPPNPEDFPELEASAKKPGRKVRAPRPRSKSQPAAGESPER
AAQLRRNASIKTAKPKPPFTKTTPPKNLKPQDKKLPALETLTITAPANNNNSNNNSQGQS
QRKVSAMVAQQRPVPTDINKKKPLPGQNQQPSSPAPNKSPPLQGSQTKLQNQTSHPHPQQ
TTGAEPRGGSKRYSSLRQRPLAEPYTPQPQPQTQPQTPAQTSSPGAAQTQQPHRYAGQSE
FTAGPAAPAPHAPHLAHQVRCTPNAPAPGHTPPPLQALPQQQQQQQVRLGIIDQPQQVVS
HPHHPIHNIQPQPHTINQLPPAQGYAPPAMMPAQYMQQSGAAPVFGGGLFPQGAAPPYPL
YPHHNYATQTGGVTYYNCAEQDQQPRAQRRPTAAIPIVKPHASERAANSTEKDNIDRIVE
NMFVRKPWPATHGADKEKSSEARSSQESGSKESSQPDSLTSSSISTDSRPSDAKEEKEKD
SRENETEQPPEA
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgacgtccgtggtacgaagacgggagcacgacgattcgggagaatattcagatgcttct
caggacatcgaacacaataactcgttgaacgaagggccgcccgagtccgattatgactcg
cagggtagcgattctgaccactctgaacgggatccagaggcacaggaaggtgaacgcaga
gttgatgatgatgaagataggagcaatcctcagtatatccccaagagaggaacattctac
gagcatgatgaccgaaccgcagccagcggcgaggaatctgtcaacacgacatccgaaacg
gcttcagagaaaaaggagggctccgagacgacgaccgaacgacgccgccctccgcgaaaa
tctgacattgtcaataaatggacacatgataaatacaacgagaatgaacagatgccgaaa
tcacgtgacgagctggtagcgatttacgggtacgacatacgcaacgaagatgcccctcct
cacgcgagacgcaacagaagatatgggtttcgacattggcgtcgtggacccaacaagtac
acacgtacctgggaagacgaggaggcgtaccgaagacagaacgcgttgccgctgagaaaa
ccaccgaaccccgaggacttccctgaacttgaagctagcgctaagaaaccagggaggaag
gttcgcgccccccggccccgctccaagtcgcagccggcggcgggcgagtccccggagcgc
gccgcccagctccgccggaacgcctccatcaaaaccgcgaagcccaagccgccgttcaca
aagacgacgcccccgaagaacctgaagccgcaggacaagaaattaccggcgctcgaaact
ttgacaatcaccgccccggcgaacaataacaatagcaacaataacagccaaggtcagtcg
cagcggaaggtgagcgctatggtggcgcagcagcggccagtgcccacggacatcaacaag
aagaagccgcttcccggccagaaccagcagccctcgagtccagcccccaacaagtcgccg
cccctgcaaggctcccaaacgaaactacagaaccagacgtctcaccctcacccgcaacag
accactggtgccgagccccgcggcggcagcaagcgctacagcagcttgaggcagcgcccc
ctggcggagccctacacgcctcaaccgcagccgcagacacagccgcagacccccgctcag
acctcaagcccgggggcagcgcagacccagcagccgcacagatatgccggccaaagcgag
ttcaccgccggcccggccgcgcccgcgccgcacgcgccgcacctcgcgcaccaggtgcgg
tgcaccccgaacgcgccggcccccggacacacgccgccgcctctccaggctctgccacaa
caacaacaacaacagcaggtcagactggggatcattgatcagccgcaacaagtcgtgtca
catccccaccatcctatacacaacatacagccgcagcctcatacgataaatcaattacca
cccgcccagggatacgcgccccccgccatgatgcccgcgcagtacatgcagcagagcggc
gcggcgcccgtgttcggcggcgggctgttcccgcagggcgcggcgcccccctacccgctc
tacccgcaccacaactacgcgacccaaaccggtggggtgacgtattacaactgcgcggag
caggaccaacagccgcgcgcccagcggcgccctacggcggccatacccatcgtcaagccg
cacgcctcagaaagagctgcgaattcaaccgagaaagacaacatagatcgtatcgtcgag
aatatgttcgtgaggaagccctggcccgcgacgcacggagccgataaagagaaatcatcg
gaggcccggagttcgcaagagtccggcagcaaggagtcctcgcagcccgacagccttacg
tccagctccatctcaacggactctagaccttcggacgccaaggaagagaaagagaaggac
agccgagagaacgagacggaacaaccgcccgaggcctga

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