Bombyx mandarina (wild silkworm): 114242580
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Entry
114242580 CDS
T05882
Name
(RefSeq) uncharacterized protein LOC114242580
KO
K14409
protein SMG7
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114242580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114242580
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114242580
mRNA cycle factors
Common to processing body (P body) and stress granule
114242580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Flo11
Motif
Other DBs
NCBI-GeneID:
114242580
NCBI-ProteinID:
XP_028029593
UniProt:
A0A6J2JJZ9
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MVLNAAVQMLREADELKQNILNFKSGTSMLQDQNIWTTQQQLQKIYQKVLVLDLDYALEK
KVEQDLWNVGFKQQIEALQAISKDRKNPQRSEGQAMLSLVLQAAAGFYLCLLHQICTTFK
LDLPFRRRTSLVGWVEGWGAGAGAGELTAGGRLPAAPAARYICQHCLVHLGDLARYRQQL
RVAHTFYRQAVCVWAHSGQPYNQLALVASRGGRRLAALYWQVRALLVRAPFPPAPANLAR
TLRAAASACNTEVPVLPGVTQTTESTVTPTTKRLDSHSYITELMKALHLIHSVEDLKTAS
SMVSNLNSSLTALVATDSFESMTLVKMTCVLIWLVHSSTEDLTLDSSTLTDDEALAAELS
RSLAAGAVLALLLPAYTSDRPPEKALPALRVWVQWAVGRGAGRGAGWGARAALWPALAHT
LNALPQHAHQHSDAYLRVPLPEDEELYGFVPLEGAFDKLRFNSHASWDTYGGRLPDLLGD
DDMQSPADAAVTLSGDSELERKIRAHRLIELGKRLAEKCPQHFSYTEEDGKVTFTGANAG
GEQLSRALAELSLVQGDEVLEGEGGGGADPHEDDSEDEPTPPPPPVIISEADFREKVREK
RVGILKPQGSLERAREERALACTQEDQPEIEVEESKSEDRREGRKPRVNIAMAAIMRKQE
ETNKQVKFVTPPPTPDSTADSTDSKEQDKPKIIQPKVMKSLANLPIGRKTGGILSLKDKS
AGYPHLVNVEPEIVKKPESDEKKDVKFSQNTNQSSQNYTARQETPSSPNWGGAGQQGYDA
PRAAFQKNYGIPKAGISYNAGHQSNQGIRLPVVNPREIDVTTAAIQKQSSRQDLFQDTHK
FGHNYQVSGDKKNFLNDLPPRFANQYRYWQAAQESQFNENKFRDDNFTPSNAALQPFNQQ
RNNWLPDNYQQVMSGWKPENQTGYNSTYSMQPNMQAHYYAPVNPNIPSYTNIPTYNQMPN
SMGQQKQENMMNPSSYLQSAIGQPQLQTLQNIVTSPNFSAQINNFGAYVPNPSYDSTMYP
QFTSKLGYQPLHMKMMDKQPGYPGKESADMGLGFGPGVPDMSQRNLSMNYKEPLGVMGPA
QNVEKVNESTVGAASGNTYSLFSGAPDALSWGQSRQPQQSLWTGPISSPLERLLEQQKQM
KPPTTQ
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggtactaaacgcagccgtgcagatgttgagggaagctgatgagctgaaacagaatata
ttaaattttaagagtggaacatcaatgcttcaagatcaaaatatatggacaacacaacaa
cagttacaaaagatataccaaaaagtgttagttttagacctggattatgcattggagaag
aaagttgaacaagatttgtggaatgttggtttcaaacaacaaattgaagccctgcaagcc
atatccaaggatagaaagaatccacaacgcagtgagggtcaagcaatgctttcgctggtg
ctgcaagccgccgccggcttctatctatgtttgctgcaccagatatgcacaacatttaaa
ttagatttacctttcagacgtcgcacatccctggtgggctgggtggaggggtggggtgcg
ggcgcgggggcgggtgagctgacggcgggcggccggctccccgccgcccccgccgcgcgg
tacatctgtcagcactgcctcgtgcatctaggagacttggcgcggtacagacaacagctt
agagtcgcgcataccttctacagacaggcggtgtgcgtgtgggcgcactccggtcagccg
tacaaccagctggcgctggtggcgagccgcggtgggcggcggctggcggcgctgtactgg
caggtacgggcgctgctcgtgcgcgcccccttcccgcccgcaccggccaacctcgccagg
accttacgggcggctgccagtgcttgcaacactgaagtgccagtgttgccaggtgtgacg
cagacgacagagtcgacagtgacgccgaccacaaagcgattggattcgcactcgtacatc
actgaactcatgaaggcattacacctcatacattcagttgaagatctgaagacagcgtcg
agtatggtgagcaacctgaactcttcattaactgccctggtggctaccgacagcttcgag
tccatgacactagtcaagatgacctgcgttttaatatggttagtacactcgtctaccgag
gacttgaccctggacagcagcacgctgaccgacgacgaggctctagcggcggagctcagc
aggtccctggcggccggcgcggtgctggccctgctcctcccggcctacacttcggaccgg
ccgccggagaaggcgttaccggcactgcgtgtgtgggtgcagtgggcggtggggcgcggc
gcggggcggggtgcggggtggggcgcgcgggcggcgctgtggccggcgctcgcacacacg
ctcaacgcgctaccgcagcacgcacaccagcacagcgatgcgtatctaagggttccgctg
ccggaagacgaagagctgtacgggttcgtgccgctggagggcgccttcgataagctgcgg
ttcaacagccacgcctcctgggacacttacggcggccgcctgcccgacctgctcggggac
gacgacatgcagtcgccggcggacgcggccgtcacgctcagtggagactccgagctggag
cggaagatacgcgcccacagactcatcgagctcgggaagagactggcggagaaatgtccg
cagcacttctcctacactgaagaagatggtaaagtaactttcacgggggccaacgcggga
ggggagcagctctcccgcgccctcgccgagctgtctctggtgcaaggggacgaggtgctg
gagggcgaggggggcgggggggccgacccgcacgaggacgacagcgaggacgagcccacc
cccccgccgccgcccgtcatcatctccgaggcagacttccgggagaaagttcgggagaag
cgcgtcggcatcctgaagccgcaggggtcgctggagcgggcccgcgaggagcgcgcgctg
gcctgcacccaggaggaccagcctgaaattgaggtagaagagagcaagagcgaggaccgg
cgggagggccgcaagccgcgcgtcaacatcgccatggcggccatcatgcggaaacaggag
gagactaacaaacaggttaagttcgtgacgccgccgccgacgccagattcgacagcagac
agcacagactccaaagaacaggacaaaccgaaaataatacaaccgaaagttatgaaatct
ctcgccaacctccccataggcaggaaaactggaggaatcctgtcactcaaggacaagtcc
gccggctatcctcaccttgttaatgtggaaccggaaatagtcaagaaacccgaaagcgat
gagaaaaaagacgtgaagttcagtcaaaataccaaccagagctcgcagaactacaccgcg
cgacaggaaaccccctcgtcgcccaactggggcggagccgggcagcagggctacgacgcg
ccccgggcagcctttcagaaaaactacggcataccaaaagccggcatcagctataacgcc
ggccaccaaagcaaccagggcatccggctgcccgtcgtgaaccccagggagatcgacgtg
actacggccgccatacagaagcagagctcccggcaagacctcttccaagacacgcacaaa
ttcggccacaattaccaagtgtcgggcgacaagaagaacttccttaacgacttgccgccg
cgcttcgcgaaccagtaccgatactggcaggccgctcaggaaagtcaattcaacgaaaac
aaatttagggatgacaacttcacgcccagcaacgcagccctacagccgttcaatcagcag
cggaacaattggctcccggataattaccagcaggtcatgtccgggtggaagccagagaac
caaaccggttacaactctacgtactcgatgcagccgaacatgcaggcgcattactatgca
ccggtcaaccctaacattccgtcgtacaccaacatcccaacctacaaccaaatgcccaac
agcatgggccaacaaaagcaagagaacatgatgaacccatcgagctacctgcagtcagcc
atcggccaacctcagctacagacattgcagaatattgtgacgtcacctaactttagcgct
cagatcaataactttggagcgtatgtgcccaatccgagctacgactcgaccatgtacccg
cagttcacaagcaagctgggctaccaaccgcttcacatgaagatgatggacaagcagccc
ggctacccagggaaggagtctgcggatatgggactcgggttcggccccggtgtcccggac
atgtcgcagaggaacttaagcatgaactacaaggaacctctcggtgtgatgggaccggcg
cagaatgttgaaaaggtcaacgagtcgacggtcggtgctgcgtcaggaaatacttactcg
ctgttcagcggggcgccggacgctctcagctggggacagagtcgccagccacaacagtca
ctatggacggggcccatctcgtcaccgctggagcgactcctagaacagcagaaacagatg
aagccaccgacgactcagtga
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