Bombyx mandarina (wild silkworm): 114242900
Help
Entry
114242900 CDS
T05882
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
bman
Bombyx mandarina (wild silkworm)
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bman03021
]
114242900
03036 Chromosome and associated proteins [BR:
bman03036
]
114242900
Transcription machinery [BR:
bman03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
114242900
Chromosome and associated proteins [BR:
bman03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
114242900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
HHH_3
SH2
HHH_9
Spt6_S1
Tex_N
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
114242900
NCBI-ProteinID:
XP_028030007
UniProt:
A0A6J2JLV1
LinkDB
All DBs
Position
Unknown
AA seq
1727 aa
AA seq
DB search
MSDFLESEAEESELDSEAEEQPAERKKHKRKAVQSDDEDEEEEDDEERLREELKDLIDDA
PIEESGSDGEDSDASVGPKKRKKSDDELDDRLEDEDYDLIEENLGVKVARNKFKRLRRLE
DDDSDNEGADDPDLEREVIAEKLFVGGSDEEDENRSDSAAPRGDVEYDDDNEELESDADD
FIVDDDGRPIAERKKKRKPIFTDASLQEGQDIFGVDFDYDEFEKYGEEDYEDEDEEDLDE
YIEDDEEEGERRRTKKGKAKRPSKKSIFEIYEPSELKRSHFTDLDNEIRKTDVPERMQTR
EVPITPVEEGSNELEEEAEWIYKQAFLKPSVSKADAQDARERTRRGSSTITKIRQALDFM
RNQTLEVPFIAFYRKEYVEPELSINDLWKVYKYDAKWCQLKQRKENLLKLFENMRDYQLD
KVMENPDAPIPENMRLVKDEDIERLKSVQTPEELRDVHAHFLLYYSCELPEMQRVQRIKE
RKKELEERKKLAREEAEKNGEDAEEAAAAIEAIELDEEDLTDIKYAAKSGPYELCRKAGI
EPLVKKFGLTPEQFAENVRDNYQRHEVEQQPVAPLEAAAEYVGNIGSAAEVVRRAVYMCG
VQLAREPLLRATLRDALRERATVSVKPTAKGIKEIDENHACYSLKYLKKKPVRDITGEQF
LKLTMAAEDKLLVVTISEQIEGNTSPSYLEELKQLYQKDEFAATVQAWNELRSEAVTIAL
TKIVMPELRRELHAVLLQESKDYVLKCCRRRLYDWLKVAPYESRISDDDDEWDASNGVRV
MSVAYVPDRAHSAFACIVGPGGEVADHLRLPHLLYRRNAWDALERRNKDADMTALRRFIC
RKKPHVIVIGGESREALNVKADISDCVQQLVEDEQFPRIPIEIADNHFSKIYSNSIRGRN
DFREYPDILRQAICQGRLLQDPLMEISQLCGPDEEILCLRYHPLQDQIAKDDLLEGIELE
FVNRVNEVGVDVNEAVLTGRGTELLQYVCGLGPRKAQALIKLFKQTNQKLENRTQLVTVC
HMGPKVFINCSGFIRIDTNSLGDSTEAYIEVLDGSRVHPETYEWARKMAVDALEYEDEDA
NPAGALEEILEAPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNSRYKDLRVSYRS
PTPEELFDILTKESPDTFYVGKMVLASVIGITHRKPQREMLDQATPVRNDETGLWQCPFC
FKNDFPELSEVWSHFDAGACPGQATGVRIRLDNGLSGYIHIKNLSDRHVTDPTERVRIGQ
TVHCRVIKIDVERFSVDCTSKSSDLLDKNNEWKPPKDPYYDQETEDKDIRKEKDAKQNKD
RMQYVKRVIVHPAFHNISFAEAEKLMDKMAQGEVIVRPSSKGSDHLTVTWKVTDGIYQHI
DVREEGKENAFSLGRSLWIQGSEFEDLDEIIARHVTPMAGHARDLIAYKYYKPLGGIRDK
AEEILKEEKAKNPNKIHYVISASKNYPGRFLLSYLPRARCTHEYVSVSPDGYKFRQRMFD
SLSGLLKWFKEHFREPPPSGTPAQRAAAARTPHGAASALYQTPAAHTPAFHTPAHTPGPA
YINTPYTPSAQTPYMTPFASTPRQTDFLTPAAPRHKAAPAAAYTEPADWQKAAEDWVRHR
GGSARDTPRRTPRHDARSTPRHDARSTPRQDARSTPRQDVRSTPRQDVRTTPRYDARSTP
HSQMYTPTHTPHTPRSSRTHSARSTPHTNTSPRSMSLGDATPLYDEN
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttctggaatctgaagcagaggagagcgagttggattctgaggcagaagag
cagccggcagaacgcaaaaaacataaacggaaagcagttcaaagtgacgacgaagacgaa
gaagaagaagatgacgaggaacgtctccgagaagaacttaaagatttgatagatgacgca
ccaatagaagaatcaggaagtgatggagaggactctgatgctagtgtaggaccaaagaaa
agaaaaaaaagtgatgatgaattggatgatcggcttgaagatgaagattatgatctcatt
gaagaaaatcttggtgtaaaagttgcaagaaacaaatttaaacgtctacgtcgactagaa
gatgacgacagtgacaatgaaggggcagatgatcctgacctggaaagagaagttattgca
gagaaattgtttgttggtggttctgatgaggaagatgagaatcgttccgattcagctgcc
ccacgtggtgatgtagaatatgatgatgacaatgaagagttggaatcagatgctgatgat
tttattgttgatgatgatggtagaccaatagctgaacgcaaaaagaaacgcaaacctata
tttactgatgcgtcactgcaagaaggtcaagatatatttggtgtagattttgactatgat
gaatttgaaaaatatggcgaagaagattacgaggatgaagacgaagaggatctggatgaa
tatattgaagatgatgaagaggaaggtgaaagacgtaggacaaagaagggtaaagctaaa
aggccaagcaagaagtcgatcttcgaaatatacgaacccagtgaattgaagagaagtcac
tttactgatttggataatgagatacgtaaaactgatgttcctgaacgtatgcaaactcgt
gaagtgcctataactccagtggaggaaggcagtaatgaactggaagaagaggcagaatgg
atttacaagcaggctttcttgaagccttcagtttccaaagctgatgcacaggacgccagg
gagagaactagacgaggttcaagtacaataacgaagattcgtcaagcgcttgacttcatg
cgaaatcagaccttagaagtgccttttatagcgttctaccgtaaggaatacgtagagcca
gaactcagtatcaacgatctctggaaagtttataaatatgatgctaagtggtgtcagctg
aaacaacggaaagagaatttgctgaagctattcgagaacatgcgtgattatcaattggac
aaagtaatggagaatcccgatgctcccatacctgaaaacatgaggctcgtcaaagatgaa
gatatagaaagattgaaatctgtacaaactcctgaagagctgcgggacgtacacgctcat
ttcctgttgtactattcctgtgaacttcccgaaatgcagagagtacaacgcatcaaggaa
cggaagaaggaacttgaggaacgaaaaaaacttgctcgagaagaggccgaaaagaacgga
gaagatgcagaggaagcagcagcagccattgaagctatagaacttgacgaagaagaccta
acggacatcaaatacgcagcgaaatcgggaccttatgaactgtgcaggaaggctggtatc
gagccccttgttaagaagtttggtttgactccggaacagtttgctgagaacgttcgcgac
aactaccagcggcacgaggtggagcagcagcctgtggcgccgctggaagccgccgccgaa
tacgtgggtaacatcgggtcggcggcggaggtggtgcggcgcgcggtgtacatgtgcggc
gtgcagctcgcgcgggagccgctgctgcgggccacgctgcgggacgcgctgcgggagcgg
gccaccgtctccgtcaagccgaccgccaagggcatcaaggagatcgacgagaaccacgcc
tgctacagcctcaaatatttaaagaaaaaaccagttcgagacattaccggtgaacagttt
cttaaattaacaatggcagccgaagacaaactgttagtggtcaccatcagtgagcagatc
gagggcaacaccagccctagttacttagaggaattgaaacagctctatcaaaaggacgaa
tttgctgccacagtacaagcgtggaatgaacttcgctcagaggcggtcaccattgccttg
accaagatcgtcatgcccgagttgagaagagaactgcacgctgtgctcttacaggaatct
aaagattatgttctcaagtgttgtcgtcggagactgtacgactggttgaaagtagctccg
tacgagtctagaatatctgatgatgatgatgagtgggacgcctccaatggtgtgcgagta
atgtcggtggcgtacgtgccggatcgcgcgcacagtgcgttcgcgtgcatcgtgggtccg
ggcggcgaggtggcggaccatctgcggctgccgcacctgctgtaccggcggaacgcgtgg
gacgcgctcgaacgccgcaacaaggacgccgacatgaccgcgctcaggaggttcatttgt
cgcaagaagccgcacgtgatcgtcatcggcggcgagtcccgggaagcgctcaatgtcaaa
gccgacatctcggactgcgttcagcagctggtggaggacgagcagttcccgaggatacct
atcgagatagccgacaaccacttcagcaagatttacagcaacagcatacgaggaaggaac
gatttccgtgaatacccagacatcctgcgtcaagccatttgtcaaggtcgtctgctgcaa
gacccgttgatggaaatatcgcagctgtgcggcccggacgaggaaatactttgcctccga
taccatccgttgcaggatcaaatcgccaaggacgatctgctcgagggcatagaactggaa
ttcgtgaacagggtcaacgaagtgggtgtcgacgtcaacgaggcggtgctgacgggccgg
gggaccgagctgctgcagtatgtgtgcggcctcggcccgaggaaggcgcaagccctgata
aaactcttcaagcagaccaaccagaagctggagaacagaacgcaattggtcacggtgtgt
cacatgggccccaaggtcttcataaactgttcaggctttatcaggatagacacgaacagc
ctcggcgacagtaccgaggcgtacattgaagtgctggacgggtccagagtgcacccggag
acgtacgagtgggcccgcaagatggcggtcgacgctttggagtacgaagacgaggacgcc
aacccagcaggcgctctggaggaaatcctcgaggctccagagagacttaaagacctcgac
ctggacgcgttcgctgaagagctggagcgtcaaggcttcggtaataagagcataactctg
tacgatattcgagcggaactgaactctaggtacaaggatcttagggtgtcgtatcgttcg
ccaacgcccgaggaactgttcgacattttaacaaaagagtcacctgatacgttttacgtg
gggaaaatggtcttagcgtctgtgatcggcatcacgcacaggaaaccgcagcgggagatg
ctggaccaggcgacgcccgttagaaacgacgagacggggctgtggcagtgtccgttttgc
ttcaagaatgattttcctgagctgtctgaagtatggagccatttcgacgcgggtgcgtgc
ccgggccaggcgactggcgtccggatccggctggacaacggcctgtccggttacatacac
atcaagaacctgtcggaccgccacgtcacggatccgaccgagagggtccgcatcgggcag
acggtgcactgccgggtcataaagatcgacgtcgaacgcttctccgtggactgcacttca
aagtcttcggacttgttggataagaataatgaatggaaacctccaaaggacccttactac
gaccaagaaacggaagacaaagatatacgcaaagaaaaagatgcaaaacagaacaaggat
cgcatgcagtacgtaaaacgcgtgatagtacatccggcattccacaatatttcgtttgcg
gaggctgaaaagcttatggacaaaatggcacagggagaggtcatcgtgaggcctagtagt
aagggctctgaccatttgaccgtaacatggaaagtgactgacggaatttatcaacacatc
gacgtgagggaagaaggcaaagaaaatgctttctcattaggtcgaagtctttggatacag
ggatccgaatttgaggatttggatgaaataatagctcgtcacgtgacaccgatggcgggg
cacgcccgagatctcattgcgtataaatactataagcctctcggcgggatcagggataaa
gctgaagaaatactcaaggaggagaaagccaaaaaccctaacaaaattcattacgttatc
tcggcctcgaagaactatcccgggagatttctactgtcatatttgccgcgggcgcggtgt
acgcacgagtacgtgtccgtgtcgccggacgggtacaagttccggcagcggatgttcgac
tctctttcgggattgctcaaatggttcaaagaacatttccgggagccgccgccatccggc
acgccggcacagcgcgccgccgcagctcgcacgccgcacggcgctgcttccgcgttatat
cagactcccgccgcccacacgccggccttccacacacccgcgcacacgccaggacctgcc
tatattaacaccccctacacaccatccgcgcaaacgccctacatgacgcccttcgcgtcc
acgccgcggcagacagatttcttgacgcctgcggcaccgcgtcacaaggcggcaccggcg
gctgcctacaccgagcccgctgactggcagaaggcagccgaagactgggtgcggcaccgc
ggtgggtcggctcgcgacaccccgcgccgcaccccgcgacacgacgcgcgctccaccccg
cggcacgacgcccgctcgacgccgcgccaggacgcgcgctccacgccgcgacaagacgtc
cgttcgacgccgcgacaagacgtccgcacgacgccgcggtacgacgcgcgctcgacgccg
cactcgcagatgtacacgccgacgcacacgccgcacacgccgcgctcgtcccgcacgcac
tcggcgcgctccacgccgcacaccaacacgtcgccgcgctccatgtcgctcggcgacgcg
actccactctacgacgaaaattga
DBGET
integrated database retrieval system
