KEGG   Bombyx mandarina (wild silkworm): 114242943
Entry
114242943         CDS       T05882                                 
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
bman  Bombyx mandarina (wild silkworm)
Pathway
bman03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bman00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114242943
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bman03019]
    114242943
Messenger RNA biogenesis [BR:bman03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     114242943
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     114242943
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N RRP40_S1
Other DBs
NCBI-GeneID: 114242943
NCBI-ProteinID: XP_028030077
UniProt: A0A6J2JM36
LinkDB
Position
Unknown
AA seq 329 aa
MVSHHIIILVYEFVVHNSQLAKRELKKTLEMVSHVSIKLASERVNHSVASNNDPPRFYTP
GEVITGIQDFMRGHGTYAEDDCLKASVAGVMQKVNKLICIRPLKSRYVGEIGDVVVGRVL
EVQQKRWKVDTNSRLDSILQLSSVNLPGGELRRRSEEDEQMMRKHLQEGDLISAEVQNVF
SDGSLSLHTRSLKYGKLSQGTLIKVFPSLIKRRKNHFHNLPCAVSVIIGNNGYIWISPHK
SDILMEGNKDAIENYEIQPVGKSERETMARVKNCILALVASKMMLDDTSIMFAFEESLKY
DNVKELLDPEAMLDVAFLTQHRINIIAEE
NT seq 990 nt   +upstreamnt  +downstreamnt
atggtatcgcatcatattatcatattggtctatgagttcgttgtacacaattcacaatta
gcaaagagggagcttaaaaaaacattagaaatggtcagtcatgtatctataaaactcgca
tctgaaagagtaaatcattcggttgcctcaaataatgacccgccgcgtttttacactcct
ggcgaagtcataactgggatacaagattttatgagaggccacggaacttacgcagaagat
gattgcctaaaagcatctgttgctggggttatgcaaaaagtaaataaacttatatgcatt
cgcccattgaagagtcgttacgttggagaaataggcgatgtggtagtcggaagagtattg
gaagttcaacagaaaagatggaaagttgataccaattcacgacttgattcaatacttcaa
ctttcttcagtaaatctacctggcggagaattgagaaggcgttcagaagaggatgagcag
atgatgagaaaacatttacaggaaggtgatttgataagcgctgaagtacagaatgtattt
tctgatggttcgctctcattgcatacaagaagtttgaaatatggcaagctttcacaggga
actttaataaaagtattcccgtcattgataaagcgcagaaaaaatcattttcacaactta
ccatgtgcagtatctgtcataatagggaataatggatatatatggattagtccacacaaa
agtgatattcttatggaaggaaataaggatgcaattgaaaattatgaaattcagcctgtt
gggaaatcagaaagagaaacgatggcgcgagtgaaaaattgtattttggcacttgtggca
tctaagatgatgttagatgatactagcataatgtttgcattcgaagaaagtctcaaatac
gacaatgtaaaggaactcttggatcctgaagctatgcttgacgtagcatttttaactcag
catagaataaatattattgcagaagagtga

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