Bombyx mandarina (wild silkworm): 114242990
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Entry
114242990 CDS
T05882
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114242990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bman03041
]
114242990
Spliceosome [BR:
bman03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
114242990
Complex C
U5 SnRNP specific factors
114242990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
114242990
NCBI-ProteinID:
XP_028030144
UniProt:
A0A6J2JMA4
LinkDB
All DBs
Position
Unknown
AA seq
2364 aa
AA seq
DB search
MSLPPYLLGPNPWATMMAQQQLAAAQQAALQAHAAAAAAAPPVPPAQPPKPTHVPEEKIK
EKAQKWLQLQSKRFAEKRKFGFVDAQKEDMPPEHIRKIIRDHGDMTSRKYRHDKRVYLGA
LKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIEPVYIAQWGTMWIMM
RREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEPIQIELDPEEDGAVASWFYDHK
PLIDTRHVNGSTYRRWNLTLPQMATLYRLANQLLTDLVDDNYFYLFDSKSFFTAKALNMA
IPGGPKFEPLVKDNSAGDEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNLPHFVQLSWY
HTPNVVYIKTEDPDLPAFYFDPLINPISHRHSVKSLEPVPEEEDYILPDEVSPFLQETAL
YTDNTANGIALLWAPRPFSMRSGRTRRAIDVPLVKTWYKEHCPPGQPVKVRVSYQKLLKY
YVLNSLKHRPPKPQKKRYLFRSFKSTKFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNL
NYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLNNVDSFQ
LADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVSKGPGCGFWAPG
WRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMHDI
VDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKMKADWWTNT
AHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTT
VHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDN
PHEALSRIKRHLLTQRTFREVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKR
RLLPPWVKPADTEPSPLLVYKWCQGINNLQDVWEVGEGECNVLLESRFEKLYEKIDLTLL
NRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVLDLLVL
GLQRASEMAGPPQLPNDFLSYQDRQTETAHPIRLYCRYIDRIHIFFRFSAEEARDLIQRY
LTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTIQWENS
FVSVYSKDNPNLLFNMAGFECRILPKCRSQHEELSHRDGVWNLQNEVTKERTAQCYLRVD
DESLARFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCEN
KIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHF
RSGMSHDEDQLIPNLYRYIQPWEAEFVDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWD
RGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTD
MIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRR
FTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESIVMDL
CQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWNVSRPSLLADTKDTMD
NTTTQKYWLDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHS
AYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFS
NQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRL
GQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPF
QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNTERTKVL
LKPDKTTFTEPHHIWPTLTDDDWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILG
MEISAPSAQRQQIAEIEKQSKEQSQLTATTTRTVNKHGDEIITSTTSNYESQTFSSKTEW
RVRAISATNLHLRTNHIYVSSDDIKESGYTYILPKNLLKKFVTISDLRAQIACYLYGTSP
SDNPMVREVHCAVLPPQWGTHQQVHLPKHLPKHPALAHLQPLGWMHTQPNELPQLSPQDI
TTHAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTPSGYEWGVRNTDRGNNPKGYLP
SHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAH
FMNFAAMEDAAAPTIAADREDLFA
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgccgccgtatctgctggggcccaacccctgggccacgatgatggcgcagcag
cagttggcagcggcacaacaagcggcgcttcaagcgcacgcggctgccgctgctgctgcg
cccccggtgccaccagcgcagccccctaaaccaactcatgttcccgaggagaagataaaa
gaaaaagctcagaaatggcttcagctgcaatcaaaacgttttgcggagaagcgaaaattt
gggtttgtggatgcacaaaaagaagacatgcctccagaacacatcagaaaaattatcaga
gatcatggcgacatgactagtcgtaaatatcgccatgataaacgtgtatacctcggagca
ttaaagtatatgcctcatgctgtcatgaagctcttggaaaatatgcccatgccttgggag
cagatcagagatgtaaaggttttgtaccatatcacaggagctataacattcgttaatgaa
attccgtgggtgattgagccagtttatattgcacaatggggtacaatgtggatcatgatg
agacgtgaaaaacgtgatcgtcgtcatttcaaacgtatgaggttcccaccttttgatgac
gaggaaccccctcttgactatgctgacaatgtcttagatgtggaaccattagagcctata
cagattgagttggatcctgaagaagacggagcagtagcatcgtggttttatgaccacaag
ccacttattgacaccagacatgtgaatggttcaacataccgtcgttggaacttaactctt
ccccaaatggcaacattgtaccgtctggctaatcaactactaactgacttggtggacgat
aactacttttatctctttgattcaaaaagttttttcactgctaaagctctaaatatggca
atccctggaggccctaaatttgagcctcttgtgaaagataattctgcaggagatgaagat
tggaatgagttcaatgatatcaataagattataatacgtcagccgattcgcactgaatat
aggatcgcctttccatatttgtacaacaatctgccgcactttgtacagttgtcttggtat
cacacaccaaatgttgtctacatcaaaactgaagatccagatctaccagccttctacttt
gatcccctcattaaccctatctctcatcgtcattcagtaaagtctcttgaaccggtccca
gaagaggaagattacatactccccgatgaagtgtctccattcttacaagaaactgcactt
tacacagataatacagctaatggtattgctctactttgggcgcccagaccattcagtatg
agatcaggacggactcgtcgcgcaattgatgtgccattggtaaaaacctggtataaagaa
cattgcccaccaggccagcctgtaaaagttcgtgtttcataccaaaaactactcaaatac
tatgttcttaactctttgaaacacagaccccccaaaccacaaaagaaaaggtatctattc
cgctcattcaaatcaaccaaattcttccaaactacaacactagattgggttgaagctggc
ttacaagtctgtcgtcaaggttacaatatgctcaaccttcttattcatcgtaagaattta
aactatcttcatctggattacaatttcaatttgaaacctgtgaagactcttactacaaaa
gaaagaaagaaatctcggttcggaaacgccttccatctgtgtcgtgagatacttcgtttg
acgaagcttatagtggactctcatgtacaatatcgtctcaacaacgtggactctttccaa
ctcgccgacggtcttcagtacatttttgctcatgttggacaactgacgggcatgtaccgt
tacaagtacaagctgatgaggcagatcagaatgtgtaaagatttgaagcatttgatttac
tacagatttaataccggtccagtatcgaaaggacccggttgtgggttctgggcgccaggc
tggcgagtatggttgttcttcatgagaggaatcacaccattactggaacgttggctcgga
aatttactatcgagacaattcgaaggaaggcattccaaaggtgtggcgaagactgttact
aaacagcgtgtggagtcacacttcgatcttgaattgcgcgcatctgtaatgcacgacatt
gttgacatgatgcctgaaggtattaaacagaataaggccaggacgatattgcaacatttg
tctgaagcttggagatgctggaaagcgaacatcccttggaaggtacctggacttccaact
ccaatagagaacatgattcttcgctacgtaaagatgaaagcggactggtggaccaacaca
gctcattacaacagagagcgtatccgccgtggtgcgactgtcgataaaacagtctgcaag
aaaaaccttggcagactaacaagattgtatttgaaagctgagcaagaaagacagcataac
taccttaaggacggtccctacatatctccagaggaagccgtggcaatctacactaccact
gtacattggcttgaatcacgacgtttcgccccaattccgttccccccactctcatacaag
cacgacacaaagctattaattttggctcttgaacgtcttaaagaagcgtatagcgttaaa
tctcgactgaatcagagtcagagagaagagctagggcttattgaacaggcgtacgataat
cctcatgaggcattgtctaggattaaacgtcatttgctcactcaaagaacttttagggag
gtgggaattgagtttatggatctctactcccatttagttccagtatatgatgtagaacca
ttggagaagataacagatgcatatcttgatcagtacttatggtatgaagcggataagaga
cgtctattgccgccctgggttaaaccagctgatacagaaccatcacctttacttgtctac
aagtggtgtcagggtattaacaaccttcaagacgtatgggaagttggtgaaggcgagtgt
aatgtcttgctcgagtcacgttttgagaaattgtatgagaagatagatttgacgctgctt
aacaggttgttacgtctcattgtggaccataacattgctgattacatgactgctaaaaac
aatgtagtgatcaattataaggatatgaatcacacaaactcatacggtataattagaggt
cttcaatttgcttccttcatcgtccagtattatggcttagtgttagacttactggtgctc
ggtctacagagagccagtgagatggctggcccaccacaactgcctaatgacttcctttca
taccaagatcgtcagacagaaactgctcatcctattcgattgtattgcagatacatagat
aggattcatatatttttcagattctcagcagaggaagcaagagatctgattcaacgctac
cttacagagcatcctgatcccaacaatgagaacattgttggttacaataacaaaaagtgc
tggccaagggatgctcgtatgcgtctaatgaagcacgatgttaatcttgggcgtgcagta
ttctgggacataaagaatcgtctaccgcgttcagtgacaactatacaatgggagaacagc
tttgtatctgtttattctaaggacaatcccaatttgttattcaatatggctggatttgaa
tgcagaatcttgccaaagtgccgaagtcaacatgaagagttgtcgcatcgtgacggagta
tggaatcttcagaacgaagtcaccaaagagcgcacagcacaatgctacttacgcgttgat
gacgaatccctggctcgtttccacaatcgtgtcagacaaatccttatggcttccggatca
acgacctttaccaaaatcgtcaataaatggaatactgctcttattggtctaatgacatac
ttccgcgaggccgttgttaacacacaagaactcctcgatttacttgtgaaatgcgagaat
aagatccaaactcgtattaagattggccttaactcgaaaatgccttcaagattccctccg
gtcgtgttttacacacccaaagaacttggaggtttaggaatgttgtctatgggacatgtt
ttgattccgcagtccgacctacgttggtcaaaacaaacagacgtcggcataacgcatttc
cgttctggaatgtcacatgatgaagatcaactaattccgaacttgtaccgctacatacaa
ccttgggaagctgagtttgtagactcccagagagtctgggctgaatacgcacttaagaga
caggaagcgaatgctcagaatagacgattgactctagaagatttggaagattcttgggac
aggggtatcccgaggatcaacacacttttccaaaaagacaggcatacactcgcttacgat
aaaggatggcgtatacgtacggaattcaaacagtatcaggtcctaaagcagaatcctttc
tggtggactcaccagcgtcacgacggtaaactgtggaacttgaacaactatcgcacagat
atgatacaagcattgggaggagttgagggtatcctcgagcatacattgttcaagggaact
tacttcccgacttgggagggtttgttctgggaaaaggcgtctggtttcgaagagtcgatg
aagtacaaaaagttgacaaacgcccaacgatccgggttgaatcagatcccgaaccgtcga
ttcacattatggtggtcgcctacaatcaacagagcgaacgtctacgtcggtttccaagta
caactggatcttactggtatattcatgcacggtaagattccgacattgaagatttcactc
atccaaatcttcagagctcacttgtggcagaaagtacatgagtcgattgttatggatctt
tgtcaggtattcgatcaagaacttgacgccttagaaattgagacagtacagaaagaaacc
atccatcctcgtaaatcttataagatgaattcatcatgcgccgatatattactgttctca
gcctacaagtggaacgtgtcccggccatccttattagccgatacaaaggacacaatggac
aataccactacacaaaagtactggctcgatatacagcttcgttggggtgattacgattct
cacgacatcgaaagatatgctcgtgctaaattcttagattatactacagacaacatgtct
atatatccttcaccgaccggtttgctgatcgccattgatttggcctataacttgcacagt
gcatacggtaactggttccccggttgcaaacctcttattcaacaagcgatggccaagata
atgaaagctaatcctgccttgtatgtgcttagggaacgtatacgtaaagcactgcaattg
tattcttcagaacctactgaaccttacctctccagtcagaactatggagaattgttctct
aatcaaatcatttggttcgttgatgacacgaatgtgtatcgtgtaacaattcacaaaacc
tttgaaggaaacttgacgactaaacccatcaacggagccatttttatattcaaccctcga
actggacagctattccttaaaatcatccacactagtgtatgggcagggcagaaacgtctt
ggacagcttgctaaatggaagactgcagaagaagtcgctgccttaattcgatcactgcct
gtagaagaacaaccaaaacaaattattgttaccagaaaaggaatgttggatccacttgag
gtccatttactcgactttcccaacatcgtaatcaagggttccgaactgcagctgccattc
caggcttgtttgaaagtggaaaagtttggtgacctcattttgaaggcaactgagcctcaa
atggtcttgttcaacttatatgatgactggctaaagactatatcttcatatactgccttc
agtcggctcatcctgatactccgtgctttgcacgtgaacacagaacgcacgaaggtcctc
ttgaaacccgataaaaccactttcacggaacctcaccacatttggcccactttaacggat
gatgattggatcaaagttgaggttcaattgaaggacctaatattagctgattatggaaag
aagaataatgtaaatgtggcgtcgctcacacaatcggaaatccgtgacatcattcttggt
atggagatatcggccccctctgcacagcgtcaacaaatcgccgagatcgaaaagcagagt
aaagaacagagtcaactaaccgcgaccacaactcgtactgtaaacaaacatggagacgaa
attataacctcaacgacgagcaattatgagtcgcagacgtttagctctaagactgaatgg
cgcgtccgtgcgatatcggccacgaatttacatcttcgtacaaaccatatttacgtgagt
tcagatgacatcaaggaaagcggatacacctacattctgccgaagaacctacttaagaaa
ttcgtaaccatttccgatttaagggcacagattgcctgttatttgtatggtacatcacca
agtgataatccaatggtacgtgaagtgcactgtgcggtactgcctcctcagtggggcaca
catcaacaagtacatctgccgaaacacctgccaaaacatcccgctctagcacacctgcaa
ccccttggatggatgcacacacaacctaatgagttgccccagctatcgcctcaggatatc
actacacatgccaaaatcatgtccgataactcatcatgggatggcgagaagacgattatc
ataacttgctcattcacgcccggctcatgttccctaactgcgtacaaacttactccaagc
ggatacgaatggggcgtgaggaatactgatagaggaaataatcctaaaggctacttgcca
agtcattacgagagagtgcagatgttgctctcagatagattcctgggctatttcatggtg
ccgtcgcagggcagttggaattataactttatgggcgtccgtcacgacccgaatatgaag
tacggtgtgcaactcggcaaccctcgcgagttctaccacgaggttcacagaccggcgcat
ttcatgaactttgctgctatggaagatgctgcagcgccaacaatcgccgccgacagagaa
gacttgttcgcataa
DBGET
integrated database retrieval system
