Bombyx mandarina (wild silkworm): 114243247
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Entry
114243247 CDS
T05882
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03030
DNA replication
bman03410
Base excision repair
bman03420
Nucleotide excision repair
bman03430
Mismatch repair
bman03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114243247
03410 Base excision repair
114243247
03420 Nucleotide excision repair
114243247
03430 Mismatch repair
114243247
03440 Homologous recombination
114243247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bman03032
]
114243247
03400 DNA repair and recombination proteins [BR:
bman03400
]
114243247
Enzymes [BR:
bman01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
114243247
DNA replication proteins [BR:
bman03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
114243247
DNA repair and recombination proteins [BR:
bman03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
114243247
MMR (mismatch excision repair)
DNA polymerase delta complex
114243247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
114243247
NCBI-ProteinID:
XP_028030466
UniProt:
A0A6J2JLT0
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MSNKMDRNKTKGPPPKRFKSGDDDDENDTPFSFEEQLACMDTGDIDSQEIFEGEGPENQS
SNMKWSRPPPPILTPNRETLIFQQLDIDHYYGTPMNGMPGSQLAPVPIMRMYGITSEGNS
VCCHVHGFTPYFYVTVPVNFTESSCNEMKTNLNKAILEDLRGNKDNIKECVLELRLVQAK
SIMYYKGDSNITFARVSVALPKLIAAAKRLIERQPLSFGLMDPQFYETNIDFDIRFMVDT
SIVGCSWIELPVGKWFLRTIDSKVKPESRCQIEVDVAWNAFIFHPPEGEWSKVAPFRILS
FDIECAGRKGIFPEAKHDPVIQIASMVIRQGETEPYLRNVFTLNTCAPIVGSQVLSFQSE
SEMLSKWSDFFRELDPDIITGYNISNFDWPYLINRAKHLNVQKFDFLGRIKNVRSVIKDT
VLQSKQMGRRENKTINFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVHHSII
TDLQNESEQTRRRLAMYCLKDAYLPLKLLNKLMCIINHMEMARVTGVPLLCLLTRGQQIK
VVSQLLRKAKEAGYLMPVYHSQGSDDQYEGATVIEPKRGYYADPISTLDFASLYPSIMMA
HNLCYTTLVPPNAQNQFNVADNDVTITPSKNMFVKNHIRKGLLPEILESLLAARKKAKAD
LKDEKDPFKRSVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMIEFTKS
EVEKKYTKANGYKEDAVVIYGDTDSVMVKFGVKTLEESMELGKEAAEFVTAKFVKPIKLE
FEKVYYPYLLINKKRYAGLYFTRPDKYDKMDCKGIETVRRDNCPLVSNVMSTCLQKLLID
RDPDGAINYAKQIIADLLCNRIDISQLVITKELTKNDYAAKQAHVELAKKMKKRDEGTAP
KLGDRVPYVLCCATKNTPAYMKAEDPIYVLENSVPIDFNYYLENQLSKPLLRIFEPILGE
KAESLLLKGEHTRTKAMVTSKVGALAAFTKKKEKCLGCKTVMPSETKKALCDHCMKKEGQ
LYITEVFKLRQLQQNFSRLWTECQRCQGSLHEEVLCTNRDCTIFYMRKKMGMELDTQENT
ILRFGQPIW
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaaatggacaggaataaaactaaaggtcctcctccaaagaggtttaaatct
ggcgacgatgacgatgaaaacgatactccatttagtttcgaagaacaactggcttgtatg
gacactggtgatattgacagccaagaaatatttgaaggtgaaggacctgaaaatcaatct
tcgaatatgaaatggtctcgtcctccaccgcctatactgactccaaaccgagaaacatta
atatttcaacaactcgacattgatcattattatggcacaccaatgaatggcatgcctggc
tcccaattggctcccgtacctataatgaggatgtacgggataacttcagagggaaactct
gtttgctgtcatgtacatggttttacaccatatttttatgtcactgtaccagtaaatttt
acagaatcttcttgtaacgaaatgaaaacaaatcttaacaaagcaatattagaagattta
agagggaataaagataatattaaagaatgtgtccttgaactgcgtttagtacaggccaaa
tcaattatgtattacaaaggtgattccaatattacatttgcaagagtttcagtagcactg
ccaaaattaattgctgctgccaaaagactgatcgaaaggcaacctctatcttttggattg
atggatcctcaattttatgaaacaaacatcgattttgatatacgtttcatggttgatact
tcaattgttggatgcagttggattgaactacctgttgggaagtggtttttaagaacaata
gattcaaaagtgaagcctgaatctagatgtcagattgaagtggatgtggcatggaatgct
ttcatatttcatccaccagaaggagagtggtcaaaagtggcaccattcagaatattaagt
tttgatattgaatgtgctggtagaaaaggtattttcccagaagctaaacatgaccctgta
attcaaattgcatccatggttataagacaaggtgaaacagaaccatatttaagaaacgta
tttacattgaatacatgtgctcctattgtaggttcacaagtacttagttttcaatcagag
tccgaaatgttatctaagtggtctgatttttttcgtgaattagaccctgatatcattact
ggatataatattagcaatttcgactggccatatcttataaatcgtgctaaacatttaaat
gtgcaaaaatttgattttctgggacgaataaaaaatgtaagatctgttataaaagataca
gtcttgcaatcgaaacagatgggtcgaagagaaaataaaaccattaattttgaaggacga
gttccttttgatttattgttggtattagttcgtgattacaaattaaggtcatatactctg
aatgctgtcagttaccatttccttcaagagcagaaagaagatgtgcatcacagtataatc
acagatttacaaaatgaaagtgaacaaaccagaaggagattggcaatgtactgtcttaaa
gatgcttacctcccactaaaacttttaaacaaattaatgtgtatcattaatcacatggaa
atggctagagttactggtgttcctttactttgtttactaacaagagggcaacaaataaaa
gttgtcagtcagctactacgcaaagcaaaagaagctggatatttaatgccagtataccat
agccaaggttctgatgatcagtatgaaggagccacagttattgaacccaaaagaggatac
tatgccgaccctatttcaaccttagattttgcatctttgtacccgagcatcatgatggca
cataatttatgttatacaactttagttccccctaatgctcaaaaccaatttaatgttgct
gacaatgatgttactataacaccttcaaaaaacatgtttgtaaaaaatcacatcagaaag
ggcctactaccagaaattctagaatcactactcgcagcaagaaaaaaagctaaggcagac
ttgaaggatgaaaaagacccatttaaaaggtcagttctggatggtagacaactggctttg
aaaataagtgcaaactctgtttatggatttacaggtgctcaagtaggaaaattaccatgc
ttagaaatatctggtagtgtcactgcttatggcagaactatgattgaattcactaagtca
gaagtagaaaagaaatacactaaagctaatggatataaagaagatgctgttgttatatat
ggagatactgattctgtaatggttaagtttggagtgaaaactcttgaagagagtatggaa
ttaggaaaagaagcagctgaatttgttacagcaaagtttgtaaaacctataaaattagaa
tttgagaaagtatactacccatacttactcattaataagaaacgatatgctggcctttat
tttactagaccagataaatatgacaaaatggattgcaagggtattgaaactgttcgaaga
gacaattgtcctcttgtttctaatgtaatgagcacttgtttacagaagttgctcatagac
agagacccagatggagctattaattatgctaaacaaattatagctgatttattatgcaat
cgaattgatatatcacaacttgttattactaaagaactcacaaaaaatgattatgctgct
aaacaggctcatgtagaacttgctaagaaaatgaaaaagcgtgatgagggaactgcaccg
aaattaggagacagggttccgtatgtgttatgctgtgcaacaaaaaatacacctgcttat
atgaaagccgaagatcctatttatgtattagaaaatagcgttcctattgattttaattac
tatttggaaaatcagttatcgaaaccccttttaaggatatttgaaccaattctaggtgag
aaagcagaatctctgcttcttaagggtgaacataccagaaccaaagctatggtcacttcc
aaagttggggcacttgctgctttcactaaaaagaaagaaaaatgtctaggttgtaaaact
gtcatgcctagtgaaacaaaaaaagcgttatgtgatcactgcatgaaaaaagaaggccag
ttatacattacagaagtattcaaattacggcagcttcaacaaaatttttccagattatgg
acagaatgtcaaagatgccaaggtagtttacatgaagaagtgctttgtaccaatcgagat
tgtactattttttacatgagaaagaaaatgggtatggagcttgacactcaagaaaataca
attttaaggtttgggcagccgatttggtga
DBGET
integrated database retrieval system
