Bombyx mandarina (wild silkworm): 114243271
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Entry
114243271 CDS
T05882
Name
(RefSeq) cohesin subunit SA-1 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
bman
Bombyx mandarina (wild silkworm)
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bman03036
]
114243271
Chromosome and associated proteins [BR:
bman03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
114243271
BRITE hierarchy
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Paralog
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Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
114243271
NCBI-ProteinID:
XP_028030493
UniProt:
A0A6J2JMG8
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Position
Unknown
AA seq
1164 aa
AA seq
DB search
MHRRGGKRIRMDDPPPEYVNPMTPATPMTDYGGQSVHEPETPNVNYSGFNTGAVANSTAV
EAPREDAEESHHEEEEPRSPSPTPKRVTRSRGRRADGGYVGRLAESPPPPPIRRRGRGVR
GRGRGRGAAPPPAYSPPPVLLPGDDENSLYNILRFNKTAINQVVDKWIEEYKTNREVALV
QLMQFFINSSGCRGKVSPDMAQMDHTLIIKKMTQEFDEESGEYPLIMTGQTWKKFRSNFC
EFIQTLVKMCQYSIIYDQYLMDNIISLLTGLSDSQVRAFRHTATLAVMKLMTALVDVALL
TSVNCDNCLRQYEAERLKARDKRATERLEVLVAKRQELEENMEEIKNMLSYMFKSVFVHR
YRDTLPDIRAITMSEIGIWMEKFPAHFLDDLYLKYIGWTLHDKVGEVRLRCLQALQPLYE
CEELKGKLELFTSKFKDRIVSMTLDKETDVAVHAVKLVIAILKMHPDVLTDKDCENVYEL
VYSSWRGVAAAAGEFLNVRLFRADPAAPAPPVLRSRRGKLRLPSTPLVRDLVQFFIESEL
HEHGAYLVDSLIESNPMMKDWECMTDLLLEEAGPGEEALDNRQESSLIELLVCCVRQAST
GEPPVGRQPSRKQHVALSKDQAKVVSDDRAKMTAHFIVTLPALLDKFGADPEKLTNLVSI
PQYFDLEIYTTQRQEGNLTLLLNKLRDIVSVQTEAEVLETCGRTLEFLCSEGCSVYTRCN
VARATITDACVNRYKEAIDDYRSLIEGGETPDADEVFNVINSLRKVSIMYMCHNLNDTNI
WDSLFEDLPKCLKQNETQMPSQALVYVVRALFYSVLWSLHALEERAGGAGGAGGGAGGAG
GAAALRDRLRAYCALCTDIVVNGTTPELKEEAYTSICDLLIFFAEHLHTLHHPNEPSMKQ
LVYQPDNDLCDLLNDFIQEFVFVQHNYDGQDERRIEELHKRRNFLAAYCKLIVYNVAPIR
RAADVFKHYIKCYNDYGDIIKATLSKAREINKLNCALTMELAMQALFRDLLRRHATPHRQ
LPEFLELKELAKRFSVMFGLDAVKNREALTALHRAGIAFAALDPAPHAPPPNLLFLEPLG
EFSNKLLRQDKRQVLKFLESRIPQGLQWGEEWTALAAYRSALLTDAPDERPPPVRRHYSR
RGRHGQNEDEEGDENAESDGDHPG
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtcgaggcgggaaacgtatacggatggacgatcctccaccggagtatgtaaat
cctatgactccggctactcctatgacggactatggtggccaatctgtccacgaacctgaa
acgcctaatgtgaactatagtggctttaatactggtgcagtggctaactcgacggcagtg
gaagcgccacgagaggacgctgaagaatcgcatcacgaggaagaggaaccgaggtctcca
tctccgacccccaagagggtgactcgaagtcgaggtagacgcgcagatggtggttatgtg
gggcgattggcggagtctccgccgccaccgcctatacgacgtcgaggccgcggtgtccgt
ggtcgtggcagaggacgaggtgccgctccacccccagcatattctccacccccggtgctc
ctgcctggagacgatgaaaacagtttatataatattttgaggttcaacaagaccgcaata
aaccaagtagtagacaaatggatagaggagtacaaaacaaatcgtgaagtggctttagtt
caactgatgcagttcttcatcaactcttcgggttgcagagggaaggtttctccagatatg
gcacagatggatcacacactaataataaaaaaaatgacacaggaatttgatgaggaaagt
ggtgaatatcctctgataatgactggtcaaacctggaagaagttccgttccaacttttgt
gagttcattcagaccctagtaaagatgtgccaatactccatcatctatgatcaatatcta
atggacaatatcatttcattactcactgggctgtctgactcacaagtacgagctttccgt
cacactgcaacattagctgtaatgaagctaatgaccgctcttgttgatgtggcgttatta
actagtgtaaattgtgacaactgtcttcggcaatatgaagcagaaagattgaaggcacgt
gataagcgggccactgaacgccttgaagtactggttgctaaacgtcaagaactagaggag
aacatggaggagattaagaatatgctgtcttatatgtttaaatctgtgtttgtccatcga
tacagggacactttgccagatataagagccataactatgtctgagattggcatttggatg
gagaaatttccagctcatttccttgatgatctttatttaaaatatattggatggactctt
catgataaggtgggtgaagtgcgtcttcgctgtctgcaagccctacaacctctatatgaa
tgtgaggagttgaagggtaaactggaactcttcacatctaaattcaaagatcggatagtt
tctatgaccctcgataaggaaactgatgtggccgtgcatgctgtgaagttggttatagct
attctcaagatgcacccggacgtgctgacggacaaggactgcgagaacgtgtacgaactg
gtgtactcgtcgtggcgcggcgtggcggcggcggccggagagttcctcaacgtgcggctg
ttccgcgccgaccccgccgcgcccgcgccccccgtgctgcgctcgcgccgcggcaagctg
cgcctgcccagcacgccgctcgtgcgggacctcgtgcagttcttcatagagtccgagttg
catgaacatggtgcttatttagtggattcattgattgaatcaaatcccatgatgaaggat
tgggagtgtatgactgacctactgctcgaagaagctggtcctggggaagaggcactggat
aatagacaagagtcgtcgctgatcgagctgctggtgtgctgcgtgcggcaggcgtccacc
ggggagccgcccgtgggccgccagccctcgcgcaagcagcacgtcgcgctctccaaggat
caggccaaggttgtaagcgacgaccgagctaaaatgacggcacacttcattgtgaccctg
ccggccctgctggacaagttcggtgcggacccggagaagctcaccaacctggtctccatc
ccgcagtacttcgacctggagatctacacgacgcaacggcaggaagggaacctaaccctg
ctgctgaacaagctgcgcgacatcgtgagcgtgcagacggaggcggaggtgctggagacg
tgcgggcgcacgctggagttcctgtgcagcgagggctgctccgtgtacacgcgctgcaac
gtcgcgcgcgccaccatcaccgacgcctgcgtcaaccgatacaaggaggccatcgacgac
tacaggagcctcatcgaagggggtgaaacaccggatgcggatgaagtgttcaacgtgatc
aattccctgcggaaagtctccataatgtacatgtgtcacaatctgaacgacaccaatatc
tgggactcgctgttcgaagacctgcccaagtgcttgaaacagaacgaaacgcagatgccg
tcacaggccctggtgtacgtggtgcgcgcgctgttctactccgtgctgtggtcgctgcac
gcgctggaggagcgcgcgggcggcgcggggggtgcggggggcggcgcggggggagcgggg
ggcgcggcggcgctgcgggaccggctgcgcgcctactgcgctctgtgcacggacatcgtc
gtcaacgggaccacgccggagctcaaggaggaggcctacacgagcatctgcgacctgctg
atattcttcgcggagcacctgcacacgctgcaccaccccaacgagccgtccatgaagcag
ctggtgtaccagcccgacaacgacctgtgcgacttgctcaacgacttcatacaggaattc
gtgtttgtacaacacaattacgatggtcaagatgagagacgtatagaggaactgcacaag
cgccgcaacttcctggcggcctactgtaagcttatcgtgtacaacgtcgcgcccatacgc
cgcgccgctgacgtcttcaaacactacatcaagtgctacaacgactacggcgacataatc
aaggcgacgctgagcaaggcgcgcgagatcaacaagctgaactgcgcgctcaccatggag
ctggccatgcaggcgctgttccgcgacctgctgcgccgccacgccaccccgcaccgacag
ctgccggagttcctcgagctcaaggagctggcgaagcgtttctccgtgatgttcggtctg
gacgcggtgaagaaccgcgaggcgctgacggcgctgcaccgcgccggcatcgccttcgcc
gcgctcgaccccgcgccgcacgcgccgccgcccaacctgctgttcctcgagccgctcggg
gagttctccaacaagctgctgcgccaggacaagcgacaggtgctcaagttcctggagtct
cgcatcccgcaagggctgcagtggggcgaggagtggacggcgctggcggcctaccgcagc
gcgctgctcaccgacgcgccggacgagcgcccgccgcccgtgcgcaggcactactcgcgg
aggggacgacacggtcaaaacgaagacgaagaaggcgatgagaacgcagaatcggacggt
gaccatccagggtga
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