KEGG   Bombyx mandarina (wild silkworm): 114243381
Entry
114243381         CDS       T05882                                 
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
bman  Bombyx mandarina (wild silkworm)
Pathway
bman03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bman00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114243381
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bman03019]
    114243381
Messenger RNA biogenesis [BR:bman03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     114243381
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     114243381
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 114243381
NCBI-ProteinID: XP_028030652
UniProt: A0A6J2JNQ8
LinkDB
Position
Unknown
AA seq 250 aa
MPAADLLSSQGLRLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAVYGPHQASK
SKMSTEAVVVNCQYSMATFSTGERKNRPRGDRKSQEMSMHLRQALTAAIKTEMYPRSQID
IYIEVLQADGGTYCASVNAASLALIDAGIPLRAYVTACSASLGRRSATHEPLVDVSHIEE
AADGVCLTVASLPSTGSIALLEMSNRLHMDHFNIVLTRAMQGCRDIEVILDGAVRQHLAE
GWTKQDVITI
NT seq 753 nt   +upstreamnt  +downstreamnt
atgcccgctgccgatctactctcgagtcaaggactacgtcttgacgggcggagacccaat
gaattacgtcggataagatgtaaacttggtgtattcacccagcctgatggaagtgcgtat
ctcgaacaaggaaacacgaaagtgcttgcagccgtgtatggaccccatcaggcttcaaaa
tcgaagatgtccacagaagctgtagttgtcaactgccaatacagcatggctacattctca
acaggtgaacgaaagaaccgacctcgcggggaccgcaagtcacaagaaatgtcaatgcat
ctccgtcaagctctaactgctgctattaaaactgaaatgtatccaaggtcgcaaatagat
atttacatagaagtattacaggccgatggtggtacgtattgtgccagcgtgaatgcagcc
agtctagcgctgatagacgctggtatacctctgagagcgtacgtgaccgcctgctcggcg
tccctgggccgacgaagcgccacccacgagcccctggtagacgttagtcacatcgaggaa
gcagccgatggagtatgtttgaccgtagccagcttaccgagcacaggtagcatagcgcta
ttggagatgtcaaatcgtctccacatggaccatttcaacattgtattgaccagagctatg
cagggctgcagagatatagaggtgattctagacggagctgtgagacaacatttggcagag
ggatggacgaaacaagatgtaataacgatatga

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