Bombyx mandarina (wild silkworm): 114243381
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Entry
114243381 CDS
T05882
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114243381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114243381
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114243381
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
114243381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
114243381
NCBI-ProteinID:
XP_028030652
UniProt:
A0A6J2JNQ8
LinkDB
All DBs
Position
Unknown
AA seq
250 aa
AA seq
DB search
MPAADLLSSQGLRLDGRRPNELRRIRCKLGVFTQPDGSAYLEQGNTKVLAAVYGPHQASK
SKMSTEAVVVNCQYSMATFSTGERKNRPRGDRKSQEMSMHLRQALTAAIKTEMYPRSQID
IYIEVLQADGGTYCASVNAASLALIDAGIPLRAYVTACSASLGRRSATHEPLVDVSHIEE
AADGVCLTVASLPSTGSIALLEMSNRLHMDHFNIVLTRAMQGCRDIEVILDGAVRQHLAE
GWTKQDVITI
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgccgatctactctcgagtcaaggactacgtcttgacgggcggagacccaat
gaattacgtcggataagatgtaaacttggtgtattcacccagcctgatggaagtgcgtat
ctcgaacaaggaaacacgaaagtgcttgcagccgtgtatggaccccatcaggcttcaaaa
tcgaagatgtccacagaagctgtagttgtcaactgccaatacagcatggctacattctca
acaggtgaacgaaagaaccgacctcgcggggaccgcaagtcacaagaaatgtcaatgcat
ctccgtcaagctctaactgctgctattaaaactgaaatgtatccaaggtcgcaaatagat
atttacatagaagtattacaggccgatggtggtacgtattgtgccagcgtgaatgcagcc
agtctagcgctgatagacgctggtatacctctgagagcgtacgtgaccgcctgctcggcg
tccctgggccgacgaagcgccacccacgagcccctggtagacgttagtcacatcgaggaa
gcagccgatggagtatgtttgaccgtagccagcttaccgagcacaggtagcatagcgcta
ttggagatgtcaaatcgtctccacatggaccatttcaacattgtattgaccagagctatg
cagggctgcagagatatagaggtgattctagacggagctgtgagacaacatttggcagag
ggatggacgaaacaagatgtaataacgatatga
DBGET
integrated database retrieval system