Bombyx mandarina (wild silkworm): 114243866
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Entry
114243866 CDS
T05882
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114243866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114243866
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
114243866
U7-dependent histone pre-mRNA processing factors
114243866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
114243866
NCBI-ProteinID:
XP_028031299
UniProt:
A0A6J2JSU9
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All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNTIDAVLI
SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVD
MAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLGGTIWRISAPGEEDIVYAPDFNHKK
ERHLNGCDIERLMRPSLMLLGAMNADYVQQRRRLRDEKLMTTILTTLRGGGCVLVCTDTA
GRVLELAHMLDQLWRNKDSGLVAYSLLLLSNVSYNVVEFAKSQIEWMSDKLTRAFEGARS
NPFALRHVQLCHSAGDVTRTPGPKVVLASFPDLEAGFARDLFLQWAPHSHNSIVLTARTS
PGTLARDLIDNGGDRVIEMVVRRRVKLEGAELEEFLQQQRMNVTNTVREEVAGISSDSDS
EDELEMCVVTGRHDIPVRLETRLGGCFKSNKRHHAIYPFHEERTRADDYGEIIKPEDYRL
AEIVDAEGEIRDVPPTAPIKQEQDEEMSEVPSKCVSSVRQVHVKAHVEYIELEGRCDGES
LLRVVSQTKPWAVVGLRASEAALHTLKKHCESEGIEKVFLPSVGETVDATTESHIYQVKL
TDGLMRGLVWRQAGDAELAWLSAVVAPRTHARESDAAPEEGGGAVSLEAGAGRPRAAAFV
NTVRLHELRAALARAGLQPDLGAGTLTCCSGTLAVRRMENGQVSLEGVLSEEYYKVRELL
YEQFAIV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaataattaaattacattgcttatctggtgctggtgaggaaactcctccgtgc
tatgtgctccaaatagatgaattcaaattcctcctggattgcggatgggacgagaaattc
gatatggttttcattaaagaacttaaaagacatgtaaacacaatagatgctgtactaata
tcacactcggatcctctacatttaggagctcttccatatgcagttggaaaactcggtctt
agctgtcctatatatgcaactctaccggtatacaaaatggggcagatgttcatgtacgat
ttataccaagcccataagaatgtttccgagttcgatttgttcacactggatgatgttgat
atggcttttgacagaatcgtacagttgaagtacaatcagagcattgaaatgaaaggaaaa
ggtctaggtctccgcattacaccactcccagctggccattccctcggtggaacaatatgg
cgcatatccgcccctggcgaggaagatattgtctacgcgcctgacttcaaccacaagaaa
gagagacatctgaatggatgtgacatcgaaagactgatgagaccctctttgatgctgttg
ggagctatgaatgctgattacgtgcaacagaggagaagactgagagatgaaaaattgatg
acaacaattcttacaacgctgcgaggaggcggctgcgttttggtatgcacagacacagcc
ggtcgagttctagaattggcccacatgctggaccaactgtggagaaacaaggattccggg
cttgtggcctattcgttacttctcctgtccaacgtcagttacaatgtcgtagagttcgct
aaatctcagatagagtggatgagcgacaaactgacgagggcgtttgaaggggctcgcagt
aatccctttgctttgagacacgtgcagctgtgccactcggccggtgacgtcaccaggacc
ccgggacccaaggtcgtcctagcctcgttcccggacctggaggcgggcttcgccagagac
ctgttcctccagtgggccccacattcccacaactcgatcgtgctgacggccagaacatcc
cccggcacactggcaagagatctgatagacaacgggggggaccgcgtcatcgagatggtg
gttcgacgtagggtgaagctggaaggcgccgaactggaggagttcttgcagcagcagaga
atgaacgtcaccaataccgtgagggaggaggtggctggcatctcgtcggactctgactcc
gaggacgagctggagatgtgcgtggtgaccgggagacacgacattcccgtgcgcctggag
accaggctgggcggctgcttcaagtccaacaagcggcaccacgccatctaccccttccac
gaggagcggaccagggctgatgactacggagagatcattaagccagaagattacagactt
gccgagatagtggacgccgaaggggagatccgggacgtgccccccactgcccccatcaaa
caggaacaagatgaggaaatgtcggaggtcccgagcaagtgcgtgtcctcggtgcggcag
gtacacgtcaaggcgcacgtggagtacatcgagctggaggggcgctgcgacggggaatct
ctgctcagggtcgtgtcgcagaccaagccctgggccgtggtggggctccgggccagcgag
gcggcgctgcacaccctcaaaaaacattgtgaatctgaaggaatcgagaaggtgttccta
ccgtccgtcggggaaaccgtcgacgccacgacagagtcacacatctatcaggtgaaactg
acggacgggctgatgcggggcctggtgtggcggcaggccggggacgccgagctggcctgg
ctgtccgccgtcgtggcgccgcgcacgcacgcccgggagagcgacgccgcccccgaggag
ggcggcggcgcggtgtcgctggaggcgggtgcgggacggccgcgcgccgccgcgttcgtg
aacacggtgcggctgcacgagctgcgcgccgccctcgcccgcgccggcctgcagcccgac
ctcggcgccggcacgctcacctgctgctccgggacgctcgccgtgcgcaggatggaaaac
ggccaagtttctctagaaggagtcctgtctgaagaatattacaaagtgcgagaactcttg
tacgaacaattcgctatagtctga
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