KEGG   Bombyx mandarina (wild silkworm): 114243885
Entry
114243885         CDS       T05882                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
bman  Bombyx mandarina (wild silkworm)
Pathway
bman03030  DNA replication
bman03410  Base excision repair
bman03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bman00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    114243885
   03410 Base excision repair
    114243885
   03420 Nucleotide excision repair
    114243885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bman03032]
    114243885
   03400 DNA repair and recombination proteins [BR:bman03400]
    114243885
Enzymes [BR:bman01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     114243885
DNA replication proteins [BR:bman03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    114243885
DNA repair and recombination proteins [BR:bman03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      114243885
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE zf_DPOE_2 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 CAP-like_CFAP184
Other DBs
NCBI-GeneID: 114243885
NCBI-ProteinID: XP_028031332
UniProt: A0A6J2JQP4
LinkDB
Position
Unknown
AA seq 2227 aa
MVLQNTGKYRPDKDDSVRREGTSSGGLKEESSETRIRAALENDRIDSKYGFDRVRDLKER
TGYLINMHTAEVLDEDKRLVAAMDYYFIEMDGTRFKISLMFQPYFLIMARRECEQEVIQY
ISKKFASSVQKIEVLEKEDLDLMNHLSGLKQRYIKLSFMSQNDMMKVRREILTAVNKNKE
REKKDVIYAEMLTNALTSAAAIEHAKKTTDHMENILDIREHDVPYHVRVSIDMRIFCGTW
YTVKCRGTDPPIFTKRDDIIERPDPIVLAFDIETTKLPLKFPDSQTDQIMMISYMIDAQG
YLITNREIISVDVEDFEYTPKPEFEGQFIVFNEPNELALIQKFFDHIMDVKPHIFVTYNG
DFFDWPFVEARAAILGLDMKQEIGFSKVTSRDNTYVCRPAMHMDCLCWVKRDSYLPVGSQ
GLKAVAKAKLRYDPVELDPEDMCRMASEQPQVLSNYSVSDAVATYYLYMKYVHPFIFALC
TIIPLEPDEVLRKGSGTLCESLLMVEAFHANIVFPNKQVEELNKLTSDGHVLETETYVGG
HVEALESGVFRADIKCKFRIAPTAVDKLLENTEKTMRHAIEVEEGIPLDMVTNFDEVCGE
IKAKLQHMKEHPRRDENPLIYHLDVGAMYPNIILTNRLQPSAMVNASTCAVCDYNKPGAT
CQRHMEWMWRGDYLPATRSEYQRIQQQLETEKFPPLHPGGPPRPFHALPKEEQAAYEKKR
LADYCKVAYKKTKVTRSEIRTTTICQKENSFYVDTVRAFRDRRYEYKALNKQAKAKVSEA
VASGDAAEIKSAKSREVLYDSLQLAHKCILNSFYGYVMRRGARWHSMEMAGIVCYTGANI
IMRAREIIEQVGRPLELDTDGIWCILPSSFPENVTIHTNHPKKKKINVSFPNAVLNAMVK
DHFTNDQYFELVDPEQKRYEQRSENSIFFEVDGPYLAMVLPASKEEGKRLKKRYAVFNFD
GSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGNDLKSCYGAVARVADYWLDVLYSRGS
NMPDAELFELISENRSMSKKLEDYGGQKSTSISTAKRLAEFLGDQMVKDAGLACRFIISK
KPEGAPVTERAIPLAIFQSPAAVKRHHLRRWLKDSSVSEHIDIRDVLDWAYYIERLSGAI
QKIITIPAAMQGLDNPVPRVQYPDWLHKKMLAKTDKYKTRKITDMFSAQPRELRAVEEDA
EESAGADTSNTEVDMEDIGNDKTGRATIIRPVVHTMKRKRTESPPQDAAATWREALGPPP
PFGNSKEERRNWILFQKRKWLWQMEQRGLRNRNKRGKIDSDIMPPPRSSGPAATLGSFIR
RAQRTLLNTPWQIIQVAETAEPGLFKVWALVGAELHQVKVSVPRVFYVNQRVCRGADSGR
YWRRCSRLLPRAHPVLHLYQYSVPEQLYREHQEELMGELSAPEIEGIYETQMSLEFRILV
QLGCICAVEPQEARRMIQFGSNNMDSFTLNQLQFKSVAHQPYLPKQDGQFPIKHIFLYQH
SSANSSRSMWALILGPLKKGYIFVQDTVKTNQVPNMSTLYAAERTAKINQGTDESTLPGP
ELSWEVVVESSTRALCRGLQAALGRGRTERAGPALLAVQATLSLPALTALMPGLVDYPIV
PLHVRDVETLFNTLEWQRIGARAIVRHYLNLESVLALTIEQCRYFHVPLGNMPADPTLFG
ADLFYARHLVKHNFVLWCSNLERPDLGGREIDDNRLASEAEEGGAWSGGAGGAHGGVCVE
LGLDALSVCALLQAHLVLQAEGTSAATAFGHAPTSLQHLLDNTGPNASLNYDEAAQCSAA
FKILRTMVASWLRDVTQYKNVFADFQITHFYRWLKTPTSLLYDPALRRTLYNLMKKLFLM
LLAEFRRLGSVLVHADFNKILLSTKKTSVVDGIGYVEFVVQSIRNKELFHGIDIRYRQCW
VHLLWLDEANYAGIQGKLPEGLTEVGSSQVPPSNNEDGDTDEESSIVMHWNLAKFLPGFV
REQFVSAVAGYLAAARTRPADLPALLRGEISQKLFRVTEKINTRMPTLRLSDIGPQPGLK
ADALSDVTPALLFVNAVCKVFSLDPTLDEEMTLVRRNLLRLIGVGEFSSAAEWREPCAAC
VLTELTCRVCNHCRDLDLCRDARDDTERPACLCPTCGTAYDNQEIEWRLIETMNKRTMAY
TLQDLICSRCHQVKRENLSVVCDCAGDFSLMVPVTEIKDQLMTFKTIAEYYQMPLLLEQI
DFNLKNM
NT seq 6684 nt   +upstreamnt  +downstreamnt
atggtgcttcaaaatactggaaaataccgacccgataaagatgattctgttagaagagaa
ggaacttcttcaggtgggctcaaggaagagtcatcggaaactagaattcgtgccgctctg
gagaatgacagaattgactcaaagtatggtttcgatcgagtgagagatttaaaagaaagg
actggctacttgatcaatatgcacacggctgaggtactcgatgaagacaaacgattagtt
gctgccatggattactatttcatagagatggacggtaccagattcaaaatttcattaatg
tttcaaccatattttctaataatggccagaagagaatgtgaacaggaagttatacaatac
atctctaagaagtttgctagttcagtgcaaaagattgaagtattggagaaggaagatttg
gacttgatgaaccacttatcaggtctgaaacagcgttacataaaattatcatttatgtct
caaaatgatatgatgaaagtccgacgggagatcttgacggcagttaataaaaataaagag
cgggaaaagaaagatgtcatttatgctgaaatgttaactaatgcattaaccagtgcagcg
gctatcgaacacgctaagaaaactactgaccacatggaaaatattttggacatccgggaa
cacgatgtgccatatcatgtaagagtctctatagacatgagaatattctgtggcacatgg
tacactgtgaaatgcagaggtactgaccctcctattttcacaaaacgagatgacatcata
gagagaccagatcctatagtactggcctttgatatagaaactacaaaattaccattgaag
tttccagactcgcaaacagatcaaataatgatgatctcttacatgatcgatgcacaggga
tacttaataacaaacagagaaattatatcggtcgacgttgaagactttgaatatactcct
aaaccggaatttgaaggccaattcattgtatttaatgaaccaaatgagctggcacttata
cagaagtttttcgatcatatcatggatgtgaaaccacacatctttgtcacatataacggt
gatttcttcgattggccttttgtggaagctcgtgccgcgatactagggctggacatgaag
caggagatagggttcagtaaggtgacgtcacgcgacaacacgtacgtctgcagacctgcg
atgcacatggactgcttatgttgggtgaaaagagactcgtatctgccggtcggctcgcag
ggcctgaaggcggtcgctaaagccaagctgaggtacgaccccgtcgagctggaccctgaa
gatatgtgcaggatggcgtccgaacagcctcaggtgctgtcgaactactcggtgtcggac
gcggtcgccacgtactacttgtacatgaagtacgtgcatccgttcatttttgccctctgc
actattatcccgctggagcccgacgaggtactccgaaagggttccggtacgctgtgcgag
tcgttactgatggtcgaggcgttccacgcgaacatcgtgttcccgaacaagcaggtggag
gagctgaacaagctgacgagcgacggccacgtgctggagacggagacttacgtcggggga
cacgtcgaggctctggagtccggtgtattcagagcggacattaaatgcaagttccgtatc
gccccaacggccgtggacaagctgctggagaacaccgagaagaccatgaggcacgccata
gaggtggaggaaggtataccgctggatatggtcacgaatttcgacgaggtctgcggagag
attaaagcgaaactacaacacatgaaagagcacccgcgaagggacgagaaccctttgatt
tatcatttggacgtcggcgctatgtaccctaacatcatattgacgaatagattgcagccc
tctgcgatggtgaatgccagtacatgcgcagtctgtgattacaacaagcccggggccact
tgccagagacacatggagtggatgtggcgcggagattacttaccggctacgaggagcgag
taccaacgtatacaacagcagctggaaactgaaaagtttccacctctacatcctgggggc
ccacccaggcccttccacgcactgccgaaagaggaacaggctgcctacgagaagaaacga
ttagcggattactgcaaggtcgcgtataagaaaaccaaagttactagaagtgaaataaga
acaactacaatatgccagaaggaaaactctttctatgtggatactgtacgtgcgttcaga
gatcgtcgttacgagtacaaagctctgaacaagcaagcgaaagcgaaggtctccgaggcg
gttgctagcggagacgcggcggagatcaaatccgccaaaagcagagaagttttgtacgat
tcactgcaattggcacataaatgtattctcaattctttctatggctacgtcatgaggaga
ggtgctcgatggcacagtatggagatggcgggcatcgtgtgctacacgggcgccaacatc
atcatgcgagctcgggagatcatcgaacaagttggcagaccgctcgagttggatactgac
ggtatctggtgcatattaccgtcatcgtttccagaaaacgtgaccatccacacgaatcat
ccgaagaaaaagaagattaatgtttccttccctaacgctgtactcaatgccatggttaag
gatcattttacaaacgaccagtacttcgaactcgtggatccggaacagaagagatacgag
cagcgctcggaaaactcgatattctttgaagtggacggcccttacttggccatggtgttg
ccggcttcgaaagaagaaggcaaaaggttgaagaagcgttatgccgtcttcaattttgac
gggtcattagctgaattaaaaggtttcgaagtaaaacgtcgcggcgaactgcaactcatc
aaaatatttcagtcgtctgtattcgaggccttccttaaagggaacgatctgaagtcgtgc
tacggcgccgtggcccgggtcgcggactactggctggacgtgctgtacagccggggctcc
aacatgcccgacgccgaactcttcgagttgatatcggagaaccgttccatgtccaagaag
ctggaggattacggcggacagaagtctacgtcgatatcgaccgccaagagactggccgag
ttcctcggtgatcagatggtcaaggacgccggcttggcttgcagatttataatatctaag
aagcccgagggtgctccggtgacggaacgagcgattccgctcgccatcttccagtcgccg
gccgccgtgaagcggcaccacctgcggcgctggctcaaggactccagcgtctccgagcac
atcgacatccgcgacgtgctggactgggcctactacatcgagaggctcagcggggccata
cagaagatcatcaccataccggccgccatgcaaggcttggacaatccagtgccccgggta
cagtacccggattggttgcacaagaagatgctcgccaaaacggataaatacaaaacgagg
aagatcacggatatgttcagcgcgcagcccagggaactacgcgctgtggaggaagacgcg
gaggaatccgctggtgctgatacctcgaacacggaagtggacatggaagacattggcaat
gacaagacagggagggctacaataattcgtccggtagtgcacaccatgaagaggaagcgg
actgaatctccgcctcaagacgccgccgccacgtggagagaggcgctgggacctccgccg
cctttcggaaactctaaggaagaacgaagaaattggattttgtttcaaaaaagaaaatgg
ctgtggcaaatggagcaacgtggcttaagaaatcgaaacaaacgaggtaaaattgacagt
gacataatgccgccgccgaggagttccgggccggccgccacgttaggtagtttcatcagg
agagcacagcgcaccttgttgaatacaccatggcaaattatacaggtagcggaaacagcc
gagccgggtctgttcaaggtgtgggcgctggtgggcgccgagctgcaccaggtgaaggtg
tcggtgccgcgcgtgttctacgtgaaccagcgcgtgtgccgcggcgccgacagcggccgc
tactggcgccgctgcagccgcctgctgccccgcgcgcaccccgtgctgcacctctaccag
tactccgtgcccgaacagctctacagggaacatcaggaagagctcatgggtgaattatcg
gccccggaaatagaaggtatttacgagacacagatgagcttagagttcaggatcctggta
caactcggatgcatctgcgctgtggagccgcaggaggcgagacgaatgatacagttcggt
tcaaacaatatggattcgtttacgttgaatcaactacagttcaagagtgtcgcacatcaa
ccttacttaccgaaacaggatggacagtttccgataaaacacatattcctgtaccagcat
tcgtctgcgaattccagtcgcagtatgtgggcattgatactgggtcctctgaaaaaagga
tatattttcgtacaggacacggtcaagactaatcaagtacccaacatgagcaccctttac
gcagctgaaaggacagctaaaataaatcaagggacagatgagagcacgctgccgggcccc
gagctgtcgtgggaggtggtggtggagagctcgacgcgcgcgctgtgccgcgggctgcag
gcggcgctgggccggggccgcacggagcgcgcggggccggcgctgctggccgtgcaggcc
acactctcgctgcccgccctcaccgcgctcatgcccggtctggttgactacccgatagtg
ccgctgcacgtccgcgacgtggagaccctgttcaacacgttggagtggcagaggataggc
gcgagggccatcgtcaggcactacctcaacttggagtcggtgctggcgctcaccatcgag
cagtgcagatatttccacgtgccgctgggcaacatgccggcggacccgacgctgttcggc
gcggacctgttctacgcccgccacctcgtcaagcacaacttcgtgctctggtgctccaac
ctcgaacgtccggacctcggagggagagagatcgacgataacagactggcgagcgaggcg
gaggagggcggggcgtggagcggcggcgcgggcggcgcgcacggcggcgtgtgcgtggag
ctggggctggacgcgctcagcgtgtgcgcgctgctgcaggcgcacctcgtgctgcaggcg
gagggcaccagcgcagccaccgccttcgggcacgcgcccaccagtctacagcacctgctc
gacaacaccggtccgaacgcgtccctgaactacgacgaggcggctcagtgcagcgccgcc
ttcaagatcctgaggacgatggtcgcgtcctggctccgtgacgtcacgcaatacaaaaac
gtcttcgcagacttccaaataacgcacttctacaggtggttaaaaacgccgacgtctctg
ctgtacgacccggcgcttcggcgcacgctgtacaacctgatgaagaagctgttcctgatg
ctgctggcggagttcaggcggctgggctcggtgctcgtgcacgccgacttcaacaagatc
ctgctcagcactaagaagacttcggtcgtcgacggaataggatacgtagaattcgtggtg
cagagcataaggaataaggaactgttccacggcatcgatattaggtaccggcagtgctgg
gtgcatctgctgtggctcgacgaggccaactatgcggggatacagggtaaacttccggaa
ggcttaactgaagtgggatcttctcaagttcctccgagcaacaacgaggatggcgacact
gatgaggagagttcgatagtgatgcactggaacctggccaagttcctgccgggcttcgtc
cgggagcagttcgtgtccgccgtggccgggtacctggccgccgcccgcacgcgccccgcc
gacctgcccgccctgctgcgcggcgagatctcgcagaaactgttccgagtaacggagaag
ataaacacgcggatgccgacgctccggctgtcggacatcgggccgcagcccggcctcaag
gcggacgcgctcagtgacgtcacgcccgccctgctcttcgtcaacgccgtctgtaaagtg
ttctctctcgatccgaccttagacgaagagatgacgctagtgcggcgcaacctgctccgt
ctgatcggcgtgggcgagttcagcagcgcggcggagtggcgcgagccgtgcgccgcgtgc
gtgctgaccgagctcacgtgccgcgtgtgcaaccactgccgcgacctcgacctgtgcagg
gacgcgcgagacgacacggaacgtccggcgtgtttatgtccaacatgtggaacagcatat
gataatcaggaaatagaatggcgactaatcgagacgatgaacaaacgtacgatggcgtat
acgctgcaagatcttatatgtagccgatgtcaccaggtaaaacgtgagaatttgtctgtg
gtctgtgattgtgctggagatttttcgctgatggttcccgtaacagagatcaaagaccaa
ctaatgacttttaagacaatagccgaatattatcagatgccattattgttagaacaaatt
gactttaatcttaaaaacatgtga

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