Bombyx mandarina (wild silkworm): 114243954
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Entry
114243954 CDS
T05882
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03013
Nucleocytoplasmic transport
bman03015
mRNA surveillance pathway
bman03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114243954
09122 Translation
03013 Nucleocytoplasmic transport
114243954
03015 mRNA surveillance pathway
114243954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114243954
03041 Spliceosome [BR:
bman03041
]
114243954
03009 Ribosome biogenesis [BR:
bman03009
]
114243954
03012 Translation factors [BR:
bman03012
]
114243954
Enzymes [BR:
bman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114243954
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114243954
mRNA cycle factors
Stress granule specific factors
114243954
Spliceosome [BR:
bman03041
]
Complex C
Other components
EJC/TREX
114243954
Ribosome biogenesis [BR:
bman03009
]
Eukaryotic type
90S particles
Helicases
114243954
Translation factors [BR:
bman03012
]
Eukaryotic type
Initiation factors
eIF-4
114243954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Cas3-like_C_2
TniB
UvrD-helicase
AAA_30
Utp25_C
Motif
Other DBs
NCBI-GeneID:
114243954
NCBI-ProteinID:
XP_028031418
UniProt:
A0A6J2JQ78
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ
RSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVI
LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL
DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDEL
TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSS
MHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIG
RSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgtctgaagtatcgtccaatagaaaaatattgtcggaagatttgtcgaatgtt
gagttcgacacgagtgaagatgtcgaagttatacccacttttgactccatgggacttcga
gatgagttattgcgaggaatatacacatatggtttcgaaaaaccttcagcaattcagcag
agaagcatcttgcctatagtcaaaggcagagatgtaatagctcaagcacaatctggtaca
ggaaagactgcgacattctcaatttcaatactacagactttagacacgactctgcgtgaa
actcaagtacttattctttcaccgacccgtgaactggcaactcagattcagaaagtgata
ttagctcttggagatttcatgaacgttcaatgtcatgcttgtattggaggtaccaatctt
ggagaagatataaggaaattggattacggacagcatgttgtgtctggcacacctggcaga
gtttttgatatgatcagaaggcgtgtgttgagaacccggtcaataaagatgctggttctt
gatgaggctgatgagatgttgaacaaaggtttcaaagagcaaatttatgatgtataccgc
tatctgcctcctgcaactcaggttgtgcttatatcagcaacactaccccatgagatattg
gaaatgacatcaaagtttatgactgatccaataaggatattagtaaaacgtgatgagttg
acactggagggtatcaaacagttcttcgtggcagttgaacgagaagaatggaagtttgac
acactttgtgacctctatgatacactgacaattacccaagcagtaatattttgtaataca
aagaggaaggttgactggctcacacagaagatgcaagaggcaaacttcactgtcagttca
atgcatggtgacatgccacagaaagagagagacaacattatgaaggaatttcgttctggt
caaagccgtgtgctcattacaactgacgtctgggcacgaggcattgatgtccaacaagta
tccttggttataaactatgacttgcccaacaatcgtgagttatacattcacagaattggt
agatcgggtcgattcggtcgtaagggtgtcgccatcaacttcgttaaatcagatgacatc
aggatcttgagagacattgaacagtactactctactcaaatagatgaaatgccaatgaat
gtggctgacttaatataa
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