Bombyx mandarina (wild silkworm): 114244135
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Entry
114244135 CDS
T05882
Name
(RefSeq) endoribonuclease ZC3H12A isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
bman
Bombyx mandarina (wild silkworm)
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114244135
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
114244135
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
114244135
NCBI-ProteinID:
XP_028031653
UniProt:
A0A6J2JQU9
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSQETELLISVPRTCIKEFRSKYLNLVETFYYVTLTEIKSSFANEETEFVYFNVTFNLNS
TDGNNNPRELIGRIQKYVESSLGWAGERAEDSSYDSECEEDSAHRAASRTPSDTLAAEFA
EYVTVTPSVPQPNQAKIEFAVKLGYSERLARIALQRLGQDPPRNELLAELIRLAAQQPPR
APSPPPPAEVDPTPERSPLRQIVIDGSNVAMSHGNKEVFSCRGIEICVDWFRARGHKEII
VFVPKWRKEASRPDNPVADRDVLDRLERDRVLVYTPSRLLGGKRLVCYDDRYVLRLAADT
DGIVVSNDNYRDLAAESPDFRRVVEERLLMYSFVNDRFMPPEDPLGRTGPTLDAFLRIPP
SRVEPPPPCPYGRKCTYGNKCKFYHPERAGRPHKSVAEKLSERAAKALRARDLHTVSLPP
GGRPSDSKRPLARAHSAAPRLADTALATHFDRAQLQPAGPSAPSSSPDFNPHRKLARQLT
LNPACDPRLHALASRVASAPGQGGAACGAAGAARLAAGASDGALQHWDARRRMHFHLSAI
FPEAQVAEAMAAYPEETDAQKMCAIILARYRPSEAPPPRPLR
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagagacggaacttttgatatcagtgccgcgtacgtgtataaaagaatttcga
agtaaatatctaaatctagttgaaactttttactatgttacattaaccgagattaaatct
agtttcgcaaatgaggaaacggaatttgtttacttcaacgtaacatttaacttgaactca
acagatgggaacaataacccacgtgaattaataggacgtatacagaaatatgtggagtca
tcgttgggatgggccggcgaacgcgccgaggactctagctatgattccgaatgcgaagaa
gacagtgcgcatcgtgccgcctctcgcaccccttccgacacactcgccgcggagttcgct
gaatacgtcaccgtcacgccttcggtaccacaaccaaaccaggctaaaatcgaatttgcc
gtgaaactgggttattcggaacgtctggcaaggatagcactgcagcgcttgggtcaagac
cctccccgaaatgagcttctggcggagctcataagacttgcagcgcagcaacctccccgc
gcgccctcgcctccccctcccgccgaggttgacccgacacctgaaaggtcgccgctgcgg
caaatcgtcattgacggtagcaacgtcgctatgagccacggaaacaaggaagttttttct
tgtcgcggtatagaaatatgcgttgattggttccgagctcgcggccacaaagagatcatc
gtgttcgtacccaaatggcgtaaggaagcatctcggcccgacaaccccgtcgccgaccgg
gacgtgctggaccggctggagcgcgaccgcgtgctcgtctacacgcccagcaggctgctc
ggcggcaagcgtctcgtgtgctatgacgaccgatacgtactgcgtttggccgcggacaca
gacgggatcgtcgtctccaacgacaattaccgcgacctcgctgcagagagccccgatttt
cgccgggtcgtcgaggaacgtctacttatgtactcattcgttaacgatcggttcatgccc
ccggaagaccctcttggccgaacgggtccgacgctcgatgccttcctccgcatacccccc
tcccgcgtcgaacctccgcccccctgcccgtacggccgaaaatgcacctacgggaacaaa
tgcaaattttatcatccggaacgagcgggtcgaccgcataaatcagtcgctgaaaaactg
agcgaacgtgccgccaaagccttgcgcgctcgcgacttgcacacggtcagcctcccgccc
ggcggccgcccttccgactcgaagcgtccactcgcgcgagctcactccgccgctccgcgc
ctcgccgacacggcactcgctacgcacttcgatcgcgcacagctgcagccggccgggccg
tcggcaccgtcttcgtccccggacttcaacccgcatcgcaaactcgcccgccagctcact
ctgaatccagcgtgcgacccgcgactgcacgcgctggcgagccgcgtggccagcgcgccg
gggcaggggggcgcggcgtgcggggcggcgggggcggcgcggctggcggcgggcgcgtcg
gacggcgcgttgcagcactgggacgcgcggcgccgtatgcacttccatttatccgccatc
ttcccagaggcgcaggtggcggaggcgatggccgcatacccggaagagacggacgcacag
aaaatgtgcgcaattattttagcgcggtaccggcccagcgaggcgcccccgccgcggccg
ctgcgctag
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