KEGG   Bombyx mandarina (wild silkworm): 114244251
Entry
114244251         CDS       T05882                                 
Name
(RefSeq) general transcription factor IIH subunit 3
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
bman  Bombyx mandarina (wild silkworm)
Pathway
bman03022  Basal transcription factors
bman03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bman00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    114244251
  09124 Replication and repair
   03420 Nucleotide excision repair
    114244251
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bman03021]
    114244251
   03400 DNA repair and recombination proteins [BR:bman03400]
    114244251
Transcription machinery [BR:bman03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     114244251
DNA repair and recombination proteins [BR:bman03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     114244251
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 114244251
NCBI-ProteinID: XP_028031808
UniProt: A0A6J2JR98
LinkDB
Position
Unknown
AA seq 290 aa
MADDDVPSDSSLLVVIVDTNPNQRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIG
CHFHKSEYLYPSPGKPLDVRQIDGQYELFTLVEKTIKMRLVNLIKSQPQEEKPGESLLAG
ALALGLCFIARSRRSAIPGLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCS
VDKHLSLLQQGCDITGGLYLKIPSLEGLLQYLLWVFLPEANERSKLVLPGRGRVDYRAAC
FCHRELLTIGYVCSVCLSVFCKFSPICTTCHTVFKIGGPPIKPKKKKMKV
NT seq 873 nt   +upstreamnt  +downstreamnt
atggcagacgacgatgtgccctccgacagcagtctcctcgtggtaatagtggacaccaat
cccaatcaaagatacataatagaggaccccaaaatgctcacaaacgtcttggatgctgta
gtagcatttagtaactcccatttaatgcagaaagctagtaatgaacttgcagtaataggc
tgtcattttcataaaagtgaatacctgtatccaagtcctggtaaacctctcgatgtaaga
caaatagatggacagtatgaattattcacattagttgagaagaccatcaaaatgagatta
gtcaatttaatcaaaagtcaaccgcaagaagagaaacccggagaatcattgctggctggc
gctttggcactgggactctgttttattgccagatctcgacgtagtgccattccgggttta
aggactagcagccgtatcctcgtggtcacgggcagcgccgacaccgctgcgcagtacatc
aactacatgaacgtgttcttcaccgcacagaaggagcaagtcctgatcgacgtgtgttct
gtggacaagcatctcagtctgctgcagcagggttgcgacatcacgggaggcctgtacctg
aagataccaagcttggagggattgctacagtacttactgtgggtgttcctgccggaagcc
aatgagagaagtaaactggtactgccggggcggggccgcgtggactaccgcgctgcctgc
ttctgccacagggaactgctcaccatcggctacgtctgttcggtttgcttgagtgttttc
tgcaaattcagcccgatatgtacaacgtgtcacaccgtcttcaaaataggaggaccacct
atcaaacccaagaagaagaaaatgaaagtttaa

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