Bombyx mandarina (wild silkworm): 114244582 Help Entry 114244582         CDS       T05882                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism bman  Bombyx mandarina (wild silkworm) Pathway bman03040   Spliceosome Brite KEGG Orthology (KO) [BR:bman00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     114244582  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bman03019]     114244582    03041 Spliceosome [BR:bman03041]     114244582 Messenger RNA biogenesis [BR:bman03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      114244582 Spliceosome [BR:bman03041]  Complex B   Other components    Prp19-related factors     114244582  Complex C     114244582 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_2 TPR_12 TPR_8 TPR_15 NRDE-2 Mad3_BUB1_I DHR-2_Lobe_A ARM_TT21 ARM_TT21_C TPR_10 PPR Motif Other DBs NCBI-GeneID:  114244582 NCBI-ProteinID:  XP_028032241 UniProt:  A0A6J2JR63 LinkDB All DBs Position Unknown AA seq 842 aa AA seqDB search MPLLDGKEIDIFFSEEDLPYEEEILRNPFSVKHWLRYIEHKKTAPKHEINMIYERALKEL PGSFKLWYNYLKLRRKQIRGRCIADPCYEDVNNCFERSLVFMHKMPRIWMDYCSFLTDQY KITTTRKAFDSALRALPITQHHRIWPLYLNFLKKHNIPETAVRVFRRYLKLCPEDTEEYI DYLTSIDKLDEAAVKLAQLVNNENFQSKHGKSNHQLWNELCELISKNPDQIHSLNVDAII RGGLRRYTDQLGHLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQIFDAYAQFEE LSLSKKMEEVAKKTNPSEDDDIDLELRLARFEYLMERRLLLLNSVLLRQNPHNVAEWHKR VKLYEGKPHEIIDTYTEAVQTVDPKLAVGKLFTLWVGFAKFYENNDQIEDARLIFEKATQ VAYVKVDDLASVWCEWAEMEIRHENYEQALKLMQRATVLPSRKVAYHDDSETVQMRLYKS LKVWSMYADLEESFGTFKSCKAVYDHIIDLKIATPQIIINYGLFLEEHNYFEEAFRAYEK GIALFKWPNVYDIWNTYLTKFLKRYGGSKLERARDLFEQCLEHCPNEFAKSIFLLYAKLE EEHGLARHAMSVYERATTAVLPEEMFEMFNIYIKKAAEIYGVPKTRQIYEKAIETLPEEK AREMCVRFSEMETRLGEIDRARAIYAHCSQMCDPRITADFWNTWKEFEVRHGNEDTMREM LRIKRSVQATYNTQVNMMSAQMLSSAAQAAGTISDLAPGMKDGMRMLEAKAAEMAVQSKG NILFVRGETQGLKESSDKVVNPDEISIDEESDHSDDDAEEDPIQKKDVPTAVFGGLVKDN ED NT seq 2529 nt NT seq  +upstreamnt  +downstreamnt atgcctcttctagacggaaaagaaatcgacatattcttcagtgaagaagatcttccgtat gaagaggaaatcctaagaaatccattttctgtcaaacattggcttaggtacattgaacac aagaaaactgcacccaaacatgaaattaatatgatatatgaacgagctttaaaagaatta ccaggatcttttaaactttggtataactatcttaaattaagaagaaaacaaataagaggt cgctgtatagctgacccatgctatgaagatgtaaacaattgctttgaaaggtctttagta tttatgcacaaaatgcctagaatatggatggattactgttcattcttaacagatcagtat aaaataactacaacaaggaaagcgtttgacagtgctcttagagctttaccaataactcaa catcataggatatggcctctttacttaaatttcttgaagaaacacaatatacccgaaaca gctgtaagagtgtttcgtaggtatcttaaattatgtcctgaagatactgaagagtatatt gactacttaacttcaatagataaattagatgaagctgcagtcaaattggctcaactagtt aataatgagaattttcaatcaaaacatggaaagtcaaatcatcaactttggaatgaatta tgtgaattgatatcaaagaatcctgatcaaattcattctctgaatgtcgacgctattatc agagggggattaagacgttacactgatcagctaggccacctgtggaactctcttgcagac tattatgttcgaagtggtctttttgaaagagccagagacatttatgaagaagctatacaa actgtgactacagtgagggattttacacaaatatttgatgcttatgcacaatttgaggaa ttaagtcttagtaaaaaaatggaagaagttgccaagaaaactaatccaagtgaagatgat gatattgatttagaattgagacttgccagatttgagtatcttatggaaagaaggctgtta ctgcttaattcagttctacttagacaaaatccacataatgtggctgaatggcataaaaga gtcaaattatatgaaggtaaaccccatgaaataatagatacatatactgaagcagtgcaa actgtagaccctaaattagctgttggtaaacttttcacactgtgggttggatttgcaaaa ttttatgaaaacaatgaccaaattgaagatgccagattaatttttgaaaaagctacacag gtagcatatgttaaagtagacgatttagcttcagtttggtgtgaatgggctgaaatggaa atcagacatgaaaattatgagcaagccctaaaattaatgcaaagagccactgttttacca agcagaaaagtagcatatcatgatgattctgaaactgtgcaaatgaggttgtataaatca ctaaaggtttggtccatgtatgctgacttagaagagagttttggtacattcaaatcttgc aaagctgtgtatgatcatattatagatttaaaaattgctactccacaaattattatcaat tatggattatttttagaagagcataattactttgaagaagcttttagagcatatgaaaag ggtattgccttattcaagtggcctaatgtgtatgatatttggaatacatatctaacaaaa tttttaaaaagatatggtggttcaaaacttgaaagagcaagagatttatttgagcaatgt cttgagcattgtcccaatgaatttgcaaagtctattttcttattatatgcaaaattggaa gaagagcatggtttagctagacatgcaatgtctgtatatgagagagctactactgccgtt ctacctgaagaaatgtttgaaatgttcaatatttatattaaaaaagctgctgaaatttat ggagttcctaaaacacgacagatttatgaaaaggctattgagactcttcctgaagagaag gctagggaaatgtgtgttcgcttctcagaaatggaaactcgcctaggtgaaattgataga gctcgggcaatatatgcacactgtagtcaaatgtgtgatcctagaattacagctgatttt tggaacacttggaaagaatttgaagttaggcatggtaatgaagatactatgagagaaatg ttaagaattaaaagaagtgtgcaagccacatataatacacaggtgaatatgatgtctgca caaatgttgagttctgcagcacaggcagctggtactatatcagatttagcaccaggtatg aaagatggaatgagaatgcttgaagccaaagcagctgaaatggcagtacagagtaaaggc aacattctatttgtgagaggagaaacccaaggacttaaagagagttctgacaaagtagtg aatcctgatgaaatatcaattgatgaagaatccgatcacagtgatgatgatgctgaagag gatccaatccaaaagaaagatgtaccaactgctgtttttggaggacttgtcaaggataat gaagactag

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