Bombyx mandarina (wild silkworm): 114244607
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Entry
114244607 CDS
T05882
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
bman
Bombyx mandarina (wild silkworm)
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114244607
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114244607
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3730
Focadhesin
KCTD4_C
Motif
Other DBs
NCBI-GeneID:
114244607
NCBI-ProteinID:
XP_028032286
UniProt:
A0A6J2JRA6
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All DBs
Position
Unknown
AA seq
1209 aa
AA seq
DB search
MDEIEYKLKTNNSVLIVNAVEKLITLIKSKFKREERQRFVLENEELKFLREKCSSKDPVV
SLTACQGLLALVELGVLEIPHTMSTVVTLIPTAQISCNYSAIISTMAGLLILDLKSRLDG
YKCQFNLKSPKHPFITVLEKNEGAEDDVLAQMHSLCTHPDYTVSSNSLELLRAVFLWLTC
NPQRDGGSRPWQLLLSLPQGQAKSLLLLACLSCQQICNPSLIERAFSAYSAVTDAAIYQQ
DKETVMALLPMLARITNELIKHGRDPRPCYILMERCFNLDAAELRTVAGLVLMILADNLP
HTSALYLHELFNLCLNIINKYAYTQISINYLIALTLQWLNMPSYLTASALKSASRILDIY
QEGAGEDTRMYMTNLNTNKTFQTLLHTDKHLSIVYNLNRNYERLRDNPDKLKCWLSDISS
LDNTVKYDMLPLLLGVAMSQNIEGDQEEIVLQSLNILIDLVDYNKDMSVQLLPILLYKIS
HDISPSIKMECLKALPLMAKSKENVPTIVSILNKLKVNKGVPISFLISLYTSLSETQVRC
FPYLQELLVDPGAGRPDDLKWEVDVARALSVKRICEIRGSSHGVELVSVISTLLNRCGDK
SGSAATSAALQSIARLWRSASIAPPSTWRALEPKLGRDTRPLVQISVCNLLAEVPALRVS
TPDYDRLISASCRRLWAYVADSNHPEVVEAACDALGGYLLDDYKLKDIPEIYRRTVKLPA
SYCKTPADAARNPEDVLEYIPCEVWPEVFKCSNQAALGGVARLTTRLIEREIKGYRSGVY
HLEAKTEPMGYNHLQPFSVIRGLMECFRKQATSPSFDYSDEILLAILQALTSDYPRPLPP
IDLCFLPEMFHRGRQWKELSVRLAARQALVSISAKRIMDNYLQSIEAENCDESDILTVYE
LLPTLCRGMPPNSLRAPIEKTLGRSHALVSKTKSSDNPEELLFVKLLVLIRRCLESEKIH
DANRKLLSQIVENYYSVIDESNVSWDTYVETCRSLSSAHLERMTSPSSWWEASGEALRRA
WRVRCEVARGAPGGVALVWLNEMIDAQASSPPEQDFSLRCMAPVLQAADPGSAAARDWFL
QLMARTQVAFNETEDLSAKLYLCDVFVLSVVTLSGHGALRPGGGVAGDRAAARALFPAAV
AALFSREPWEQSTPQILEWLCHTRISVADPRMAQCCQRGLLSMRHAAHFTTHNTWIKLES
HLARENIED
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatcgaatacaaattgaaaactaacaacagtgtcttaatagtcaacgcagta
gaaaagttgataacattgataaagtcaaaattcaaacgtgaagaacgacagagattcgtt
ttggaaaacgaggaattgaagtttttgagggagaaatgttcgtccaaagatcctgttgtg
agcctgacagcctgtcagggactcctagcgttggtggaactcggtgttctggaaataccg
catacaatgtccactgtagtaacacttataccgactgcgcaaataagttgtaattactcc
gcgataatctcgacaatggcaggtcttctcattctcgatctgaagtcgcgtctcgatggc
tacaaatgtcagttcaatctcaaatcaccaaagcatccatttataaccgtactggagaag
aacgaaggtgccgaagatgatgtgctggctcagatgcattctctttgtacgcatcctgat
tacacagtttcttcgaatagtctagaactccttagagcagtcttcctctggttgacgtgt
aaccctcaacgagacgggggctcgaggccgtggcagctgttgctgagtctcccccagggt
caagctaagtcattgctactcctagcatgcctcagttgccaacagatatgcaacccgtcg
ttaatagagagagcattcagtgcttactcggctgtcaccgatgccgccatttaccagcag
gataaagagacggttatggccttactgcccatgctggctagaatcaccaatgagctgatc
aagcatggtcgtgacccgcgtccctgctacatcctgatggagcgttgcttcaacctggac
gctgcggaactcaggaccgtcgccggcctggtcctgatgatcttagctgacaacttgccc
cacacgtcggctctgtacctccatgagcttttcaacttgtgtttgaatattataaataaa
tacgcgtacacacagatctcgatcaactacctgatcgctctaacgttacagtggcttaat
atgccatcttatctcaccgcttctgctttgaaaagtgcatcgagaatcctcgatatttac
caagagggcgccggagaggacaccaggatgtacatgacgaatttaaatacgaataaaaca
tttcaaacattactgcacacggacaaacatctttcaatagtctacaatttgaatcgaaat
tatgaacgtctgcgcgacaatccggacaaattaaaatgttggttgtctgatattagctct
ctagataacacggtcaaatacgacatgttgccgctattgctcggtgttgccatgtcgcaa
aacatcgagggggatcaggaggagatcgtgttgcaatcattaaatattttaattgatctg
gttgattataacaaggatatgtctgttcaacttttaccgatcttgctctataaaatatcg
cacgatatatcgccgtctatcaaaatggagtgcctgaaggctttaccgctaatggctaag
agcaaggaaaatgtgccaacaatagtgtcgatattgaacaagctgaaggtcaataaaggt
gtgccgatttcgttcctgatcagtctgtatacgagtctaagtgaaacgcaggtccgctgc
tttccataccttcaggagttgttggttgacccaggcgcggggaggccagacgatctgaag
tgggaagtcgacgtagctagggctctatcggtcaaacgcatctgcgagattaggggctcg
tctcacggcgtggaactggtgtcggtgatctcgacgctgttgaaccgctgcggcgacaag
tccgggtcggcggcgacctcggccgcgctgcagagcatcgcccggctgtggcgcagcgcg
tccattgcgccgccgagcacgtggcgcgcattggaacccaaactgggacgcgacacgcga
cctctggtgcaaatcagcgtttgtaacctgcttgccgaagtgccagccctgagggtgtcg
actcctgactacgaccggctgatcagtgcctcctgccgccggctctgggcttacgtggcc
gattcgaatcatcctgaagtggtggaggcagcatgcgatgccttgggtggatatctgttg
gatgattacaagcttaaggacataccagagatctacagacgcacggtcaaactccctgcc
tcgtactgcaagactccagctgacgcggccaggaatcctgaagacgtcctcgagtatatt
ccgtgcgaggtgtggccagaagtgttcaaatgcagtaaccaggcggccctgggcggagtc
gcgcggctgacgaccaggctgatcgagcgcgagatcaaggggtacaggagcggcgtgtac
catttggaagccaaaactgagcccatgggctacaaccacctccagccgttcagcgtcatc
aggggcctgatggaatgtttcaggaagcaggcaacctcaccctcgttcgactactcggac
gagatcctcctggcgatactgcaggccctgacctccgactacccccgaccgctgcccccc
atagacctgtgtttcctgcccgaaatgttccaccgcggccgccagtggaaggaactctcc
gtaagactggccgcccggcaggctctggtctccatctctgccaagaggatcatggataac
tatctgcagagtatcgaggcggagaactgtgatgaatctgatatcctgacagtctacgaa
ctcctgccgaccctgtgccgagggatgccgccgaactcccttcgagctcccatcgagaag
accctaggcaggtcccacgctctcgtctcgaagaccaagtcctcggacaatccagaggag
ctgctgttcgtgaaactgctggtgctcatccggagatgcttggaatcggagaagatacac
gatgccaacaggaaactgctctctcagatcgtcgagaattattattctgttattgacgaa
tcaaatgtgtcgtgggatacctacgtggagacctgccgaagtttgtcgtcagctcacctg
gagcgcatgacgtcgccgtcgtcgtggtgggaggccagcggcgaggccttgaggcgggcg
tggcgcgtgaggtgtgaggtcgcgcggggggcgcccgggggggtcgcgctcgtgtggctc
aacgagatgatcgacgctcaagcttccagtccacccgagcaagacttctctctgcgctgc
atggcgccggtgctgcaggctgcggaccctggctccgcggccgcgagggactggttcctg
cagctgatggcgcgcacgcaggtcgccttcaacgaaacggaagacttgtcggccaagctg
tacctgtgcgacgtgttcgtgctgagtgtggtgacgctgagcggacacggcgcgctgcgg
cccgggggcggagtcgccggggaccgcgccgccgcccgcgcgctcttcccggccgccgtc
gccgcgctgttcagccgagagccctgggaacagtctacgccacagatccttgaatggttg
tgccatacccggatctcggtggcggacccccgcatggcgcagtgctgtcagcgcggcctg
ctgtccatgcggcacgcggctcacttcacgacgcataacacttggatcaaattagaaagt
catctcgccagagaaaacattgaagactga
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