Bombyx mandarina (wild silkworm): 114244712
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Entry
114244712 CDS
T05882
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B-like
KO
K12821
pre-mRNA-processing factor 40
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114244712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bman03041
]
114244712
Spliceosome [BR:
bman03041
]
Complex A
U1 snRNP components
U1 related factors
114244712
Complex B
114244712
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
WW
FF
WW_TCERG1
WW_2
RhoGAP-FF1
SL4P
Cir_Bir_Yir
GIDA_C_1st
AbiEi_2
Motif
Other DBs
NCBI-GeneID:
114244712
NCBI-ProteinID:
XP_028032398
UniProt:
A0A6J2JSY3
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MEPPSAGTSSPGLLNAPPLLPPPMLSGMPPPMPPAVAMPPVPGLPPNMATLPPPMGFPPM
LPPPFSIPPPGFPAFKPELNAPAPDVAPSANQSSPWSEHKAPDGRTYYYNSVTKQSLWEK
PDDLKTSAEKLLSACVWKEYTTNTGRLYYHNIETKESSWVVPKELQEIKDKIAAEEAAQR
IVMEVTPSEVPLPAEPAGSSALDEAMAKTLAAIDTSLATSIPVPDEIEPEDTVSINNETQ
EQPEMLYKDKKEAIEAFKELLKDKNIPSNATWEQCVKVISKDPRYVTFKKLNEKKQAFNA
YKTQKLKDEREEQRAPPSDRKIIRATITQTPLGLYHLERHPDRRIVWIPCEPLVHSLVHR
LTEHILVGLNRRRPVPTRALFFDIAKAFDKV
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggagccacccagtgcggggaccagttctccgggtctcttaaacgcgcctcctctttta
ccgcctccaatgctaagcggtatgcctccaccaatgccgcccgctgtggcaatgccacca
gtgcctgggttacctccaaatatggctacattaccaccgcccatgggctttcctcccatg
ttgccgcctccattttcaataccaccgccaggattccctgcattcaaaccggaattaaat
gctcctgcaccagatgttgctccatcggcaaatcaaagtagtccatggtctgaacataag
gcccctgatggaagaacatattactataattctgtaaccaaacaaagcttgtgggaaaaa
cctgacgacttaaaaacgtcagctgagaaactattatctgcttgtgtatggaaagaatat
accacaaatactggcagactttactatcataatattgagacaaaggagtccagttgggta
gtaccgaaagaattacaggagattaaagacaaaattgctgctgaagaagctgctcagcgc
attgtgatggaagtaacaccgagtgaggtgccgctgccggcagagcctgcaggctcctcc
gcccttgacgaagctatggctaaaacattagcagccattgatacctcattggccacatcc
atacctgtacctgacgaaatagaaccagaagacacagtttcaattaataatgaaactcaa
gaacagccggagatgttgtacaaagacaagaaagaggctattgaagcatttaaagaactg
ctgaaagataagaatataccctcaaatgcaacatgggaacaatgtgtaaaagttatttca
aaagacccacgatatgtcacttttaaaaaactcaatgaaaagaaacaagcgttcaatgct
tacaaaactcaaaaattaaaagatgaaagagaggaacagagagctcctcccagtgatagg
aaaattatacgagcgactattacgcaaacgcctctgggactttatcacctcgaaaggcat
cctgatcgacgaatagtttggattccatgcgaaccacttgtacattcgttagtgcaccgc
ctcacggagcacatcttagtagggctaaatagacgcaggcccgtccccacgagggccctc
ttcttcgatatcgcgaaggcgttcgacaaagtttga
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