Bombyx mandarina (wild silkworm): 114244750
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Entry
114244750 CDS
T05882
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
bman
Bombyx mandarina (wild silkworm)
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bman03009
]
114244750
Enzymes [BR:
bman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114244750
Ribosome biogenesis [BR:
bman03009
]
Eukaryotic type
Pre-60S particles
Helicases
114244750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
114244750
NCBI-ProteinID:
XP_028032449
UniProt:
A0A6J2JW78
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MANKDWSKVQPPLSKPVLNCINKHGFKTMTPIQAAVIPLLLSCKDVVAEAVTGSGKTLAF
VVPMLEMLLKKKKDGPLRKDFVYVVIISPTRELATQIFKVIEDFLQEPELASTTLALLVG
GRPIEVDAIALQKGADIAVCTPGRLEDLLSERKQLNLAGRLKELELLVLDEADRLLDLGF
SGTLTTILQYLPRQRRTGLFSATQTKELQDLVRAGLRNPVVVSVKEKSTISTPLLLETYY
VIVEAQDKFLFLLNFIRNRKIAKGLFFLPTCACVDYWTDVLPVFLPDIKIFGLHGKMKQK
RHKILEKFRQADNTILLCTDLLARGLDIPEVEWVLQWEPPCQPSALVHRAGRAARGGARG
CALLPLLTTEDAYVPFIKTNQMVELKDWRESDDQIKITDKLRERVLGILHEQQKKDRAIF
DKGQRAFVSHMRAYTKHECNLLLQFKELPLGHIATSYGLLKLPLMPEIKPEHKQQFVGPK
EEIDFNTIQYRDKQKETSRLQKLEEYKKSGVWPSKKKKKMVQTLPWEQAKQNKEERKEKR
KKRKELKQKNPELKKGKKRKVITQEELDALAADVALIKKLKKRKITQDQFDREFEAD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaagattggtctaaagttcagcccccattatccaagccagtgttgaactgt
attaataaacatggttttaaaactatgactccgattcaagcagccgtaattcctctatta
ttgtcctgcaaagatgttgtggctgaagcggtgactggatcgggaaaaactctcgcattt
gtcgtcccgatgctggaaatgctcttgaaaaagaagaaagatggacctttgagaaaggat
ttcgtttacgtagtcataatttcgcctacaagggaactggctacgcaaatatttaaagta
atagaagatttcttacaagaaccagaattagccagtactaccttggccctactagtcggt
ggtcgtcccatagaggttgatgcgattgccttacagaaaggtgctgatatagctgtatgc
actccgggtagactagaagacttgttgtctgaaaggaaacagttgaatcttgccggaaga
ctgaaagagttggaactcttagttctggatgaagccgaccgtctactagaccttggcttc
tcgggcacactcacaaccatcctacaatatttaccgagacaacgtcgtactggtctcttt
tcggcaacacaaaccaaagaactgcaggacttagtaagagctggtcttcggaatcctgtt
gttgtgagcgtgaaagaaaagtcaacaatcagtactcccttgctgttggagacttattac
gtaattgttgaagctcaggataaatttttgttccttttgaactttatcagaaatagaaag
atagctaaaggtttattttttctaccaacgtgtgcatgtgtggattactggacggatgtg
ctacccgtattcctgcctgacattaaaatatttggattacacggcaaaatgaagcagaaa
cgacacaaaatattagagaagttccggcaggctgataacactatcttgctttgtacagat
ttgttggccaggggcctggacattccagaggtggagtgggtgttgcagtgggagccccca
tgtcaaccatccgctctcgtgcaccgcgcgggcagagcagcgaggggtggagcccggggc
tgtgccctgctgccgctgcttaccacagaggacgcttacgtgcccttcataaagactaat
caaatggtcgagttgaaagactggagggaatctgacgatcaaatcaaaattacagacaag
ttaagggaaagggtgctcggcatcctccacgagcagcagaagaaagaccgcgccattttc
gacaaagggcagcgagcgttcgtctcccacatgcgagcctacaccaaacacgaatgcaac
ctgctgctccagttcaaggagcttcctctggggcacatcgccaccagctacgggctcctc
aaactgcctctcatgccagagatcaaaccggagcacaagcagcagtttgtcggccctaaa
gaggagatagactttaacacaatacagtacagggataagcagaaggagacgagtcgcctg
cagaagttggaagagtataagaagagcggggtttggccgtcgaagaaaaaaaagaaaatg
gtccaaacactcccgtgggaacaagcgaaacagaacaaagaagaaaggaaagagaaaagg
aagaaacgtaaagagttgaaacagaagaatccagaacttaagaaaggaaagaagaggaaa
gtgataacgcaagaggaactggacgcgctggccgccgacgtcgcgctcataaagaagtta
aagaaacgtaaaataacacaggatcagttcgatagagagtttgaagctgattaa
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