Bombyx mandarina (wild silkworm): 114244918
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Entry
114244918 CDS
T05882
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114244918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114244918
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114244918
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
114244918
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
114244918
NCBI-ProteinID:
XP_028032683
UniProt:
A0A6J2JTT1
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MAGLLLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILV
GIKTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFD
LKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDL
QLSDDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGITGNSKSYCAD
KGASNLSDVDIKCSTISMNGPGSLAPKTLKNAIHQGIIAAKVLDDSLGQALLRERRENIN
SMKSSYGFLK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcaggactgttactaagttctacagaaaaagtttttattgttcacggtgtacaagag
gactttcgttccgatgggcgatcaaacattgactataggcccatggaactagaaacagat
gtagtgagccacgctagtggctcagcgcggcttcgtcttgcaaacacagacattttagtt
ggcattaaaacagaaatagatacaccaaagccagacaaaccagatatgggaaaaattgag
ttttttgttgattgctcagcaaatgccacaccggaattcgaagggcgtggtggagaaaat
ttagctagcagcatttcaaacacaatgcaaagagcatatcactcatcacaagcctttgat
ttgaagcaattatgcattgtagaaggcaaacagtgctggaaactttatgttgatatattg
atcttggaatgtgggggtaatttgtttgatgcagtttcattagcaaccaaagcagctctg
tttaacacaaggataccattagtaaaagccttgttgatggatggaggaaatgttgattta
caactctcagatgatccttatgatttcaaatttctagatgttggttctgcacctttgttg
gtaacactatgtaaaataggagaaaaatgcgtggtagatccctcagctgaagaagaaagc
tgcagtgtaatatcattgatagttggaattactggaaacagcaaatcttactgtgcagat
aaaggagcttctaacctatctgatgttgacattaaatgtagtacaatcagtatgaacgga
ccaggcagtttagcaccaaagacattaaagaatgcaattcaccagggcatcattgctgca
aaggtactagacgattcattaggacaagccttattgcgtgaacgacgagaaaatatcaac
tcaatgaaaagttcatatggatttcttaaataa
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