Bombyx mandarina (wild silkworm): 114245055
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Entry
114245055 CDS
T05882
Name
(RefSeq) exosome complex component MTR3-like isoform X1
KO
K12587
exosome complex component MTR3
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114245055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114245055
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114245055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Apo-CII
Motif
Other DBs
NCBI-GeneID:
114245055
NCBI-ProteinID:
XP_028032858
UniProt:
A0A6J2JUA0
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MPLDFRRFNGPEDSVSYKIYTKDYLKTYDEQLKDLYDENGKRKDGRELNEARSMCMFCMF
ARTDMVSQAKGSAYVELRKTKVVCSVFDPREIPHQNEFRQLGQLYCEVKFAPFSCPRKRR
PYVPDVEEKALSVALRQALEPAVCRHFFPNYQIDVLIYILEHDGSCLAAAINAAGLALAN
AAVPMFDIITSCSVAVIGNKMFIDPTEIEEHIAKNSTEVNHGIITMSVLSQLKQISDFTQ
IGSMDVECVTKVMEVLLKECEIIVPNIQRILVVDVVKNFELKKHLEAETKKREEILKKKM
DEWRSLLNGQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgccgctagattttcgaagatttaatggtccagaagatagtgtatcatataaaatatat
actaaagactacttgaaaacatacgacgaacaattaaaagatctgtatgatgaaaacggg
aaaagaaaagatggacgtgagctaaatgaagctcgcagcatgtgtatgttttgtatgttt
gccagaactgacatggtttcacaagcaaagggttcagcatatgtggagttaaggaaaact
aaagttgtatgctctgtatttgatcctagggagataccacatcaaaatgaattccgtcag
cttggccagttatattgtgaagtgaaatttgcaccgttttcatgcccgaggaaacgtcga
ccgtatgttcctgatgtagaagagaaagccttgtctgttgctttacggcaggctcttgaa
ccggctgtctgtaggcacttcttcccaaactatcagattgatgttttaatatacatctta
gaacatgacgggtcatgtttagcagctgctatcaatgcagcaggacttgctctagccaat
gctgccgttccgatgtttgatataatcacatcatgctctgtagcagtcataggcaacaaa
atgttcattgaccccaccgaaatagaagaacatatagcaaagaacagtacagaagtaaac
cacggaattataacaatgtcagtgttatcacagttaaaacagatttcagatttcacacaa
atcggttctatggatgtcgagtgtgtcacaaaagtaatggaagttttattaaaagaatgt
gaaataatagttccaaatatacaaagaattctagttgtggatgttgtaaagaattttgaa
ttgaaaaaacacttagaagcagaaacaaagaaacgggaagagattttgaaaaagaaaatg
gatgaatggagatctttattaaatggtcaatga
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