Bombyx mandarina (wild silkworm): 114245339
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Entry
114245339 CDS
T05882
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03013
Nucleocytoplasmic transport
bman03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114245339
09122 Translation
03013 Nucleocytoplasmic transport
114245339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114245339
03041 Spliceosome [BR:
bman03041
]
114245339
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114245339
Spliceosome [BR:
bman03041
]
Complex C
Other components
EJC/TREX
114245339
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114245339
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
114245339
NCBI-ProteinID:
XP_028033280
UniProt:
A0A6J2JUI7
LinkDB
All DBs
Position
Unknown
AA seq
1409 aa
AA seq
DB search
MGSYAKFVSDYCKNWDKSGRELFLKHLTQFTKDEHRTPLFSKSGKMSGFSQSVYDFLLCG
LKGNLKKDTVLSFLREITNLHADVPSIILDIISILDAETSLDVQSDERAYFCYIVRELEP
FISDKLLKERLEIDTLQDAGTLKNKNFYTKFIKIKTKLYYKQRKFNLFREESEGYSKLIV
ELNQEINEDTEWKNLLEIIQSLIGCFNLDPNRVLDIILESFEARPQLDALFIPLIKSYMA
DPHVISEVLGFKLSNMEILDNYTEPPPLMTVIALLLQHQVISLDDIYPWLRPDDVIIAKQ
ADKEIKAVQEYIRKINIVSTKGPQTNAPTEFIEDKADPQEYWSNQKLVLCETLLRVNAWR
EFASLFARLPTTTMPPRPAIALCGLLHAVVEPLYRKQCRVASKILGKPVPPLKSNLAPPN
CKTFEDMKETVIPALILLGPALHHDPVLMYKVIRILRTARGQKDDPLHFEALTVLDTAIL
PALTLMEGNCCMAEEVYTLLKLYPYQCRYCLYARWKNEAGERIPALIRVRGNSLQKIKHI
MKRVSKENIKPQGRLIGKLSHAAPAFLFDYVLLQIQTYDNLIGPVVESMKYLTSLSLDVL
GYCLVEALGSRRSTPPAWLQALASFAGAAFKKHNIELTALLQFVANRLKAQQSQDLIVLK
EIVQKMAGIEAAEEMTPEQLEAMAGGELLKGEAGYFSQVRNTRRSSARLKDAIVGNNLDI
SLCILAAQQRHCCVWKEYEDDVQISGEPPGSQLKVVGRLADQCQDALVQLGTFLASSHAP
DEYAARLPSLQELLRDYHVDADVAFFLHRPVINQKISAKLESLRKASDSKSDSIEKIIER
YNVASKEALEPIVSSIQPMLPARVLEDISPEFYVTFWSLSMYDLRVPVESYEREIERLKT
AAANVSKDSSQGTKVKKEQERFNTLIEKLQEERRRQAAHVAAVRARLARECEDWFPARAV
RSAKNETVTRLMQLCIFPRCVFTAADALYCAEFVHTVHSLKTPNFSTLLCYDRLFCDITY
SVMSCTEAEAARYGTFLCKVLTTAMRWHADKDAFHRECAHYPGFVTKYRVSKQFTEANDH
VGYENYRHVCHKWHYKITKAMVVCLDSGDYVQIRNALIVLIRVLPHFPVLAKLSQIIEKK
IDKVKEQEKIQRQDLYVLATVYSGQLRNKSSNMMNEADFHQMSDKHKAASTAAASAAPPK
EEVVADPEPTPAPAPPPQESEKRDSRNSDRRRDEADRDKDSKRESKTSTKERSKEETRIK
DRSPKERLQRESNYLEAISPPHEHRSTSDDVERDIKRRKVENSSNGKASKELEERSPEKE
KRKTKVRGDERKERKMNRKRDRAEESTILEQKRRRDEQKGAIKMSGHQNGSQEDHHYDKY
KREKSPFRDRSHEEARDKHRRTNESKIRR
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgggatcctacgcaaaattcgtatctgattactgtaaaaactgggacaaatctggtcga
gaattgttcttgaaacatttgacgcaattcacaaaagatgaacataggactccactattt
tcaaagtctgggaaaatgtctggattttctcaaagtgtctatgattttcttctttgtggc
ctgaaaggaaaccttaaaaaagataccgttttatccttcttaagagaaataactaatttg
catgcagatgtgccatcaataatattggatatcatatcaattttggatgctgaaaccagc
ctagatgtacaaagcgatgagcgggcttatttctgctacattgtgagagagctggagcca
tttatttctgataagttactaaaagaaagattagagatagatacattacaagatgctggt
accctaaagaacaaaaacttctacaccaaattcataaagatcaagactaaattatactac
aaacaacgtaaatttaacttatttcgagaagaaagtgaaggatactcaaagttaatagtt
gaattgaaccaagaaataaatgaagatacagaatggaaaaatttgcttgaaataattcaa
tctcttattggttgttttaatttggatccaaacagggtacttgacataattctagaatcg
tttgaagcccgaccacaattagatgctctttttataccgcttattaagagttacatggca
gatcctcatgtaatttctgaggttttaggtttcaaactgagtaatatggaaattcttgat
aactatacagaacctccaccgttgatgactgtaattgcattgcttttacaacatcaggtt
atatcattagatgacatctatccatggcttcgcccagatgatgtgataatagctaaacaa
gctgataaagaaataaaagcagttcaagaatatataagaaaaattaacattgtgtctacc
aaaggaccacaaacaaatgcccccactgaatttatagaagataaagctgatccgcaggaa
tattggagcaatcaaaagctagtgttatgtgaaactttattgagagtcaatgcgtggcga
gagtttgcctcactgtttgcgcgtcttcccactactacgatgccgccaagaccagcaata
gccctttgtgggttgttgcatgctgttgtagaaccattgtatagaaagcaatgccgagta
gcttcaaaaatcctgggaaaaccagtacctccacttaaatcaaatttagcaccacctaat
tgtaaaacattcgaagacatgaaagaaacagttataccagcccttatattgcttggtcca
gcccttcatcatgaccctgtcttgatgtacaaagtcattagaatacttagaactgctcgc
ggtcaaaaagatgatccattacattttgaggcactaaccgttttggataccgcaatatta
ccggctcttacactgatggaagggaattgttgtatggctgaagaggtgtacacattactt
aagttatatccatatcagtgcagatattgtctctatgcgcgttggaaaaatgaggctggc
gaacgaatacctgctctcattcgtgtccgggggaactcattgcagaaaataaaacacata
atgaaacgagtatccaaagagaatatcaagccccaaggtcgtctcatcgggaaactgtcg
cacgccgccccggcctttctgtttgattacgtgctcttgcagatacaaacatacgacaat
ctgataggaccagtagtagaatccatgaaatatttgacgtctctatctttagatgttctg
ggatactgtttagttgaggctttaggctctcgacgttcgacgccacctgcgtggctacaa
gcactagcctcgttcgccggggcagccttcaagaaacacaacattgagttaactgctctt
ttgcagtttgttgctaatcgactcaaagctcaacagagtcaagacttgatagtattaaaa
gaaatagtacaaaaaatggccggtatagaagctgctgaggaaatgacacccgagcagtta
gaggctatggcgggaggtgaattacttaaaggagaggctggttacttttcacaagtgcgt
aacacgagacgctcttctgcgcgactcaaagatgccatagtcggaaacaacttagacata
tcgctttgtatattggcggcgcaacagcgacattgttgcgtttggaaagaatacgaagat
gacgttcaaataagtggcgaacctccagggtcccagctaaaggtggtgggtagattggca
gaccaatgtcaggatgctctggttcagcttggtacattcttagcatcgtcacatgctccc
gatgaatatgcggcgaggctgccatcgttacaggaactgctgcgtgattaccacgtagat
gcagacgtcgcattctttttgcatcgtccagttataaaccaaaagatatccgccaagttg
gaatctttacgtaaagcatcggacagcaaatcggattcaatagagaagattatagaaaga
tacaatgtggcatcaaaggaagccttggaacctattgtatcgtcaatacaaccgatgctg
cctgcgagggttttagaagacatttcgcctgagttttacgttacattctggtcattatcc
atgtacgatcttcgagtgccggtcgaaagttacgagagggaaatagaacgtttaaaaaca
gcagcagctaacgtcagcaaggattcgtctcaaggaaccaaagttaagaaagaacaggaa
cgtttcaatacgctcatcgaaaaactacaggaggagcggcgccgacaggccgcgcacgtg
gcggcggtgcgggcgcggctggcgcgcgagtgcgaggactggttcccggcgcgggcggtc
cgctccgccaagaacgagaccgtgacgcggctcatgcagctgtgcatattcccgcgctgc
gtgttcacggcggccgatgcgctctactgcgccgagttcgtgcataccgtgcactctctg
aagactcccaatttctccactcttctgtgttatgataggttgttttgtgacatcacgtat
tcggtgatgtcttgcacggaggcggaggcggcgcggtacggcacgttcctctgcaaggtg
ctgacgaccgccatgcgctggcacgccgacaaggatgccttccaccgagagtgcgcgcac
taccccggcttcgtcaccaagtaccgcgtctccaagcagttcactgaagctaatgaccat
gtcggatatgaaaactacaggcacgtgtgccacaaatggcattataaaataaccaaagca
atggttgtttgcttggattcaggcgactacgtgcaaatacgtaacgccctcatagttcta
ataagagtcttacctcattttcctgttctggctaagctaagtcaaataatcgaaaagaaa
attgataaggttaaggaacaagagaaaatacaaagacaagatctttatgtgttagcaacg
gtctacagtggacagctacggaacaagtcctcgaatatgatgaatgaagctgatttccat
cagatgagcgacaagcacaaagcggcgagcaccgcggccgccagcgctgcgcctcccaaa
gaagaagtggtcgcagatcctgaacccacccccgcccctgcgcccccaccacaagaaagt
gaaaaacgggactcgcgcaatagcgaccgccgccgagacgaagcggaccgggataaagat
tccaaaagagaatcaaaaacctccacaaaggaaaggtccaaagaagaaacccgaattaaa
gatagatcgcccaaagaacgtttacagagggaaagcaattatttagaagcaatctcaccg
ccacacgaacatcgcagcacttcagatgatgtcgaacgagatataaagcgacgtaaagtt
gaaaacagcagtaacggcaaggctagcaaagaattagaagagcgatctcctgaaaaggaa
aaaaggaagactaaagttagaggtgatgaacgcaaagagcgtaagatgaaccgcaagagg
gacagagctgaggaatctacaattttagaacaaaagagacgccgagacgaacaaaaagga
gcaatcaagatgagcggtcatcagaatggttctcaagaagatcaccattacgacaaatac
aaaagggagaaatcaccattccgtgaccgttcccacgaagaagccagagataaacatagg
cgcactaatgaatccaagataagaagatag
DBGET
integrated database retrieval system
