Bombyx mandarina (wild silkworm): 114245626
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Entry
114245626 CDS
T05882
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114245626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bman03400
]
114245626
DNA repair and recombination proteins [BR:
bman03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
114245626
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
114245626
NCBI-ProteinID:
XP_028033665
UniProt:
A0A6J2JVT9
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MSSLQPIHALNLDSVQQQAFVNFFNSLPDKPPTTVRVFDRNDYYSIHGIDATTAAREVFS
SVANIKRMGVEPNRLDYLVLSKGNFEILIKKLLLVRRYRVEIYVADGSIKGCDWSLKYKG
SPGYLTQLEEVLGEGLGGSDENTPCLMAVNIKTDPVSKGKLLGVACVVAADYQMSVSEFT
DDDLLTQLETITVQTAPSECLVPFSDNDDYKALKKVMDRTNVTVTKLKRVDFSTEGLVQD
LNRLLNFKEDQQQDANAFPETRKDLAMTSLAATIKYSALLNESTNFGRFRLSTIRTDCFL
HLDAAALTALNILPELGDNSNSPSRSLFGLLDRCRTQHGKRLLAQWLRQPLRDINLINER
LDVVELLMNNSQLRLQLHEDHLRRIPDLQALTRRLARKKANLHDCYKIYQAIKRLPSLLQ
CLTEAENTTVHSSLTEPISELNDDLDKFQQMIEATLDMGAVERGDFLVKPSFDEQLQSLN
EQLERLQSSAERELGKAARDLGLDAGKTIKLENNTQNGFCFRITLKEERNLRGDKKYKII
DAVKSGVRFRTNTLESINEDYTQAKTDYEKEQDKVVKEIVSIAGGYSECLFCLSHILSRL
DVLVSFAVAASSAPYPYCRPVVTESIDELILKDVRHPCLEVQEGVSYIPNDVEFKRGSVM
LHIVTGANMGGKSTWMRSVGASAVLAQAGCPVPAAAARLPRLAALCARIGAADCERRGLS
TFMTEMIECAAILKTATPNSLVLIDELGRGTSTYEGCGIAWAIAEQLANECKCFCLFATH
YHELTRLASIHPNVIVNSHAAASVVDGQLVLLHKILPGPAARSLGLHVARLADLPDSIIE
YAEAKQAELETNLYEVEAAMESNETAEGQKLIKEFLKKCKEIQASASSDDKMMQEIKILK
QELLTCDNKYVQTLIL
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttacaacctatacatgccttgaacttagattctgtgcaacagcaggcattt
gtgaatttttttaattctcttcctgacaaaccaccgacgaccgtgcgtgtatttgaccgc
aatgactactacagcattcacggtattgacgcgaccactgcagcccgggaggtcttttcg
tccgtggccaacataaaacgtatgggagtggaacctaaccgcctcgattacttagtactt
tcaaaaggaaactttgaaattctcattaagaaactgttattggtgagacgttacagagtc
gaaatatacgttgccgatggatcaataaaaggctgcgattggtcactcaagtacaaaggc
tctccgggatatctgacgcagttggaggaagtgcttggcgaaggcttaggcggctcggac
gagaacacgccatgcttgatggcggttaatataaaaaccgacccggtttcaaagggtaag
ctcctgggagtggcttgcgtagtcgctgctgactatcagatgtcggtctcagaattcacc
gacgacgatctgctgacacaacttgaaacgataaccgtccaaacggcgccttcggaatgt
cttgtaccgttctcggataatgatgactacaaagctttgaagaaagtaatggatcgcacc
aacgtgaccgtaacgaaactgaagagagtcgacttctcgaccgaaggtctcgtgcaggac
ttgaacagattgttaaacttcaaggaagatcaacagcaggacgctaacgccttcccggag
acgaggaaagacttggccatgactagtttagcggccacgataaagtacagtgctttacta
aacgaaagtaccaactttggcagatttcgtctgtccacaatacgaacggactgcttccta
cacttggacgcggcggcgctgacggctctcaacatactaccggagctgggcgacaattcg
aactcgccttctagaagcttgttcggtttactggacaggtgtcggactcagcacggcaaa
agattgctggctcaatggctgcgacaaccactccgcgacattaacctaatcaacgagcgg
ctagacgtcgtggaacttctcatgaacaactcccagctgaggcttcaattgcacgaggac
cacttacggcgcataccggacctacaggccctgaccagacgactggccagaaagaaagct
aatttacacgactgctataagatatatcaggcaatcaagaggttaccgtctttgctacaa
tgtctcactgaagcagaaaatacgacagtgcattcgtcactcacggagcccatctcggag
ctgaacgatgacctcgacaagttccagcaaatgatagaagctacacttgacatgggtgct
gtagaaagaggcgatttcctagtgaagccgtcgttcgacgaacaactgcagagtctgaac
gaacaactggaacgtctgcagtcgtctgcggagagggagctggggaaggccgcgagggac
ttgggactagatgcaggcaaaactattaaactagaaaataatacgcagaatggattttgt
ttcaggattactctgaaagaagaacgaaatttacgaggcgacaagaaatataaaataatc
gacgccgtcaaaagcggtgttcgattcagaactaatacattggaatcaattaatgaagac
tacacacaagccaagaccgactacgagaaagaacaagataaggtcgttaaagaaatcgtc
agtatagctggtggatattcagaatgtttgttctgtctatctcacatactgtcgcgtcta
gacgtcttggtgtctttcgctgttgccgcttcatcagccccgtacccgtactgcaggccc
gtggtcacggagtccatcgacgaactcatcctgaaggatgtgaggcatccgtgtctggag
gtgcaggagggcgtgtcctatataccaaacgacgtagaatttaaaagaggctcggtgatg
ctgcacatagtgaccggcgcgaacatgggcggcaagtcgacgtggatgcggtcggtgggc
gcgagcgcggtgctggcgcaggcgggctgccccgtgcccgccgccgccgcgcgcctgccc
cgcctcgccgcgctgtgcgcccgcatcggcgccgcggactgcgagcgcaggggactcagc
accttcatgacggagatgatcgagtgcgccgccatccttaagacggcgacaccgaactct
ttggtactaattgacgagctgggacggggtacgtctacgtatgaaggctgcggcatagcg
tgggctatagcggaacaattagcgaacgagtgcaaatgtttctgtttgttcgcgacccat
tatcacgagttgacgcgtttggcgagcattcacccgaacgtgatagtgaactcgcacgcg
gcagcttcggttgtcgatggacagctggtactgctgcacaagatcctcccgggacccgcc
gcgcgttcactcggcttgcacgtcgccaggctcgccgacctcccggattcgattatcgag
tatgcagaagcgaaacaagcggagctagaaacgaatttatacgaagttgaagcggctatg
gaatcgaacgaaacagcagagggtcagaagcttattaaagaattcttaaaaaaatgcaaa
gaaattcaagcatctgccagtagtgatgataaaatgatgcaagagatcaagattttaaaa
caagaattgttaacttgtgacaacaaatatgtccaaactctaatattgtga
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