Bombyx mandarina (wild silkworm): 114245687
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Entry
114245687 CDS
T05882
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
bman
Bombyx mandarina (wild silkworm)
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bman03036
]
114245687
Enzymes [BR:
bman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
114245687
Chromosome and associated proteins [BR:
bman03036
]
Eukaryotic type
Gene silencing
piRNA pathway
114245687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Motif
Other DBs
NCBI-GeneID:
114245687
NCBI-ProteinID:
XP_028033749
UniProt:
A0A6J2K084
LinkDB
All DBs
Position
Unknown
AA seq
1759 aa
AA seq
DB search
MASDYYQVEILHYLNPNLIWVEVLNSPNEIVFEQLGVYGILPIDASLDVEKPGLKLQRSE
DWMPAAAILMKNILQNLEQVWFSPTHIDRRSSIFDNNIHKYGELIIKKNGVQLYLSKELV
KAGLATEDPCQFHQYMSLGKIKTKLSNTETRAVIKNLEEYYRKSSKPKELWQKSVHQNTS
IFHAGERLQALTVKNLERHNNRQNIMLLENKLKDLEQCKGSDEVSLGRGVCRVPSNKSEM
VMLTNKRLKNRLELLSKINMKSDATDAVKSTKRNFSGDGQRKNFENDFESDDESVKKVSI
ANTLNTSDGSANVVDKLLDEKQIDNVFNNKKQICYTESTRRNPVKKAACIVYGPPSINID
KLPLKEAPKMTKTVKWTPHVDCDKEASEVSFGDVDSHVKLDVKNLDKFHEIADRIEIEKT
IPVDVNIHKDLYDSSINNKNESESKIIETANLKTEMKNLRKSSILQSKLKQFDKFNVSSN
SAASESSTKSSMDSSRISDEDDLSSDDEMSEIMESFKLNLATPKKSEAKHTIDHIEVNNT
KLNANPFKNLDGSKSVFVDKLTSPVLLVHTKRNNKVQPCSLLRDVPFGTSIHVVLRNMGI
KHPTRLQTVSWGTILRGLSTFLISPPRSGKTMGYLPAVCRLVRDFRKESPDSCGPKCIIV
CATSKSVSEVERISKMLLGLEDKVFACYSGMDNLSVTTALLNGCDLLICTPKSIVRLLQN
DLSVDLRDLTTFVVDDCERISDVYSNEVKYVLFEIKNMLKNRVNKELKVQIVVASRIWCD
FLEPIVLKAPDSVVCIGAFQELILYSKISTTVDFLRPENKIANVLQFIDSVQGPKRTVVV
CRADNEVKAVESSLRYNNRVVFACDNTMNIHDLYNLNVVWGDFEDPTLGPILVCCDSNLV
HLNVTDASYLIHYSLPALFSTFCKRFSVLNDNYPSIFKNESRDLKVKVLMDESNVEQLPK
ILNFLKRCTENVPKILDEVSEKILNEKDLAKVKDLVPLCDNLLSLGICPDTWNCTERHRI
FKECDSPADWIPKNGVVTFQILYFHSAVMYSARLLSNTVDGETTKYPQTYSTLSLKMGMY
FSKESSRRLHGIPMVGDVCAVSKKQNFFIRCQVVKIISFYKNGNPNYVVIKLIDEEKFEQ
SRDIYLYHLPDEFKDMKTYVVQVRLANIQPQDKDITFSCLAKNELEKIVEKNEDLFMRGH
VAMSVGSCIFVDTLEACLALSSLSETVVRHNFKQELLNAHAVPNPKHLSILEEMCEKSGL
IVKAVTNEQVVPKPIPVLPAAQWAHLEDDLSSVYLASVEDMDKLFVRLVKFESCMKLLNI
EINKYVSENTVPLDGSNVGDIVLAKFPDDSMYERARIDHIYSEDKVKCFFVDQGDWRDVS
TNDLATITENFITQLPFQAIECRLIGIRPFGEQWTEFSTNWFSDHCFEDAKGNLKHLYVK
HFTKEKADCTGGHKYGVALIDTYTNEDIIVNQLLIDLNLAKENVDEIAYLSEIKCNKTVL
NKGATVDEEEGSLSGVSEPESNINVPLDKVFLKPPIRSVPLVDSDNETSDSDTWQINRPE
DFKALFMRTRPESSKIIPMITANEVQNNADGETSKDTSTILEEKGQLPEKVKDDELKLSK
PKICWSQNKNTVKLKILIAGIEDYKLKIEDRAVAFSANHCDVEYGFKLELYGVVDVNKSR
HSNKGQYVLVTMTKLMCRNWLALTKEGDSQKWIVYDVDTIEASSDEEVYRDDTLEVIKNI
HNTNNGSDSEDDDFLDDVS
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagactattatcaagttgagatattacactacctcaatccgaatttaatatgg
gttgaagttcttaattctcccaatgaaatcgtatttgaacagctgggtgtttatgggatt
ttgcctatcgatgcatctttggacgttgaaaaacctgggttaaagcttcaacgttcagaa
gattggatgccggctgcagccattctgatgaaaaatatacttcagaaccttgaacaagta
tggttttcacctacacacattgaccgcaggtcatcaatatttgacaataacatacataaa
tatggtgaactaataattaaaaaaaacggtgtccaattgtatttatcaaaagaattagtc
aaggcgggattagctaccgaggatccatgtcaatttcaccagtatatgagtttaggcaaa
ataaaaactaagctcagtaataccgaaacaagagcagttataaagaacttggaggaatac
tacaggaaatctagtaaacccaaagagctatggcagaaatctgtgcatcaaaacactagt
attttccatgcaggtgagcgactgcaagctttgacagtaaaaaatctggaaagacataat
aacagacagaatattatgttgttagagaataagctcaaagatctagagcagtgcaaaggt
agcgatgaagtgtccctgggtcgaggcgtttgtagagtaccatcaaacaagtcagagatg
gtcatgttaaccaacaagagattgaaaaataggcttgaattattgtctaaaataaatatg
aaatcagatgctactgatgctgtaaaatcgactaagagaaacttcagtggtgatggacaa
agaaaaaactttgaaaatgattttgaatctgatgatgaaagtgttaaaaaagtttcaatt
gcgaataccctcaatacttctgatggatcagctaatgtcgtagacaaacttttggacgaa
aaacagattgataatgtttttaataataaaaaacaaatctgctatacagaaagtactaga
agaaaccccgtgaagaaagcagcttgcatagtatacgggccacccagcatcaatatcgat
aaactgccgttgaaagaagctcccaaaatgactaagactgtgaaatggactccacatgtg
gactgcgacaaagaagcttcagaagtgtcgttcggtgacgtagattctcatgttaaatta
gatgttaagaatttagataagttccacgaaatagcagatagaatagaaatagaaaagacg
ataccggtagacgtaaatattcataaagatctatatgatagttcgattaacaacaagaat
gaaagtgaatctaaaataatagaaacagctaatttaaaaaccgaaatgaagaatctacgt
aaatcaagtatcctacagagcaagctgaaacagtttgacaaatttaatgtttcctcaaat
tctgccgcgtccgaatctagcacgaaatccagtatggattctagtcgtatatcagacgag
gacgatctcagttccgatgatgaaatgtctgagattatggaaagttttaaactaaattta
gctacaccaaagaaatctgaagcaaagcacactattgatcatattgaagtaaataacacg
aaattaaacgcgaacccttttaaaaatctagacggaagtaaatcagtgtttgttgataaa
ctaacaagtcccgtattgctggtgcacacgaagcgtaataataaagtacaaccatgcagc
ctccttagggatgtccccttcggtaccagcatccacgtggtgctcagaaacatgggcata
aaacacccgaccaggcttcaaactgtatcatggggcacgattttacgcggcctcagtaca
ttcctcatcagcccaccacgaagcggaaaaactatgggctatttaccagcggtctgtcgt
ctagtcagggattttcgaaaggaatcaccggattcgtgtggtcctaaatgtattattgtt
tgtgccacatcaaaatctgtatccgaagtcgagaggatcagtaaaatgctgttaggtctt
gaagataaagtgtttgcttgttactccgggatggataatctcagtgtaacaacagcattg
ctgaacggttgtgatctattgatatgtacgccaaagtcgattgtgcgactgcttcaaaac
gaccttagcgtcgatttgagggatctcaccacgttcgttgttgatgattgtgaaaggata
tcagatgtatattcgaacgaagtgaaatatgttttgttcgaaataaaaaatatgctaaag
aaccgtgttaacaaagagcttaaagtccaaatcgttgtggcttcgagaatatggtgcgac
ttcttggagccgatcgttttgaaagcccccgattctgtagtttgcattggtgcgttccaa
gagcttatattatattcgaaaattagtacgactgttgattttcttagacctgaaaataaa
atcgcaaacgtgttacagttcattgactctgtacagggtcccaaaagaacggtggtcgta
tgtcgcgccgataatgaagttaaagctgtagaaagctctttacgatacaataaccgtgtc
gttttcgcttgcgacaacaccatgaatatccacgatttgtacaatttaaatgtagtttgg
ggtgatttcgaagatccaacgttgggtccaatactggtctgttgcgatagtaatttggtt
cacttgaacgtcacagatgccagttacctgattcattactcattgccggctctcttttcg
acattctgcaagagattctccgttttaaatgataattatccttctatttttaaaaacgag
tccagagatttaaaggttaaggtcttgatggacgaatctaacgtagaacaattgccgaaa
atcctaaatttccttaaacgttgtaccgaaaacgttcctaaaatactggacgaagtttcg
gagaagatattaaatgaaaaggacttggcaaaggtcaaagatttggtgcctctgtgcgat
aatttactgtcattgggaatttgtcctgatacctggaattgtactgagagacatcgaatc
ttcaaagagtgtgacagtccagctgactggataccgaagaatggagtggtcactttccaa
attttatatttccattcagccgtcatgtactctgctcgtttactgtcaaatacagtggac
ggtgaaacaacaaaataccctcagacctacagtactctatccctcaaaatgggtatgtac
ttcagcaaggaatctagcagacggctgcatggtattccaatggttggcgacgtgtgtgcc
gtatcaaagaagcaaaatttcttcattcgatgtcaagtagtgaagattataagtttttat
aaaaacggaaatcctaattatgttgtaataaagcttatagacgaagagaagtttgagcag
agtcgcgatatttatttatatcatttacctgatgaattcaaagatatgaaaacttacgtt
gtacaagtcagactagctaatatacaaccacaggacaaagacattacgttttcttgttta
gctaaaaatgagctggagaaaatcgttgagaagaacgaagacttgttcatgagaggccac
gtggctatgagtgtaggaagctgtatatttgtggatactttagaagcttgtctggcccta
tcatctctcagcgaaactgtagtaaggcataatttcaaacaagaactattaaacgctcat
gctgttcctaatcctaaacatttaagcattttggaagaaatgtgcgaaaagtctggtttg
attgttaaagcggtgacaaacgaacaggtagtgccaaaaccgataccagtactaccagca
gcgcaatgggcgcacctggaagatgatttgtcgtccgtatatttggcctcagtcgaagat
atggataaactctttgttcgtcttgtgaaattcgaaagttgcatgaaattgttgaacata
gagattaataaatatgtgtccgaaaacaccgttccgttggacgggtcaaatgttggggat
atagtactggctaagttccctgatgattcgatgtacgagagggcaaggatagatcatatt
tactcagaagacaaagtaaaatgctttttcgttgaccaaggtgattggagggatgtctcc
acaaacgatctagcgactataaccgagaatttcattacccaactaccgttccaagcgatt
gaatgtagattaataggcatcagaccttttggggagcaatggacggagttcagcacgaac
tggtttagcgaccattgttttgaagatgctaaaggcaatttgaaacacctttacgttaag
catttcaccaaggaaaaagccgattgtactggaggccacaaatatggtgttgctttaata
gacacgtacaccaacgaagacattatagttaaccagctattgatagacttgaatttagcc
aaagaaaacgtagatgaaatagcatatctatcagaaatcaaatgcaataaaacggtttta
aataaaggcgcaaccgttgatgaagaagaaggtagcttatcaggtgttagtgaacccgag
agtaacataaacgtgcccttagataaggtattcttaaaaccaccgatccgctcagtgccg
ctagttgattccgataacgaaacgagtgattctgatacgtggcagatcaataggcctgaa
gatttcaaagcgcttttcatgaggaccagacccgagtcttcgaaaataatacctatgata
actgccaatgaagtacaaaacaatgcagatggagaaacgtcaaaagatacttcgactata
ttagaagaaaagggtcaattgccagaaaaagtcaaggacgatgaattgaaattgagcaaa
ccgaagatttgttggagccaaaacaaaaatacggtgaaattgaaaattttgattgccgga
atcgaggattacaagctgaaaatcgaagatcgggctgtcgcgttttcggccaatcattgt
gacgtcgaatatggtttcaaactggaactgtacggagtcgttgatgttaacaaatctagg
cattcgaacaaagggcagtacgttttggtgaccatgacgaaattgatgtgcagaaattgg
ctagcgctgaccaaagagggggattcccagaaatggatcgtgtacgatgttgatacgatt
gaggcttcgtcagacgaagaagtgtatcgcgacgatacgttagaagtgattaagaacatt
cacaatacaaataacggatctgacagcgaagacgatgatttcttggatgatgtcagttaa
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integrated database retrieval system
