KEGG   Bombyx mandarina (wild silkworm): 114246102
Entry
114246102         CDS       T05882                                 
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
bman  Bombyx mandarina (wild silkworm)
Pathway
bman03420  Nucleotide excision repair
bman03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:bman00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    114246102
   03460 Fanconi anemia pathway
    114246102
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bman03032]
    114246102
   03400 DNA repair and recombination proteins [BR:bman03400]
    114246102
DNA replication proteins [BR:bman03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    114246102
DNA repair and recombination proteins [BR:bman03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     114246102
SSDB
Motif
Pfam: ERCC4 UDI
Other DBs
NCBI-GeneID: 114246102
NCBI-ProteinID: XP_028034293
UniProt: A0A6J2JXY9
LinkDB
Position
Unknown
AA seq 899 aa
MNAKIQEDENVENTVSNLKNKFPMLSFEKQIFIDVFEKDALVIMAKGHNYNNIVANLLWV
HKDPGNLVLVINSNDNEEKYFTEKLQLTPVPTLGNERERSYLEGGIHFVSTRILVVDLLK
NRVPISHITGIVVLRAHTVLESCQEAFALRLYRQKNKTGFIKAFSNSPISFTFGYHQVEK
VMRALFVTELFLWPRFHGNIIRNLKSRQAQAEELHIPLTTNMSYIQTCLLDIMNYTVKQL
KSINRSLDMKEITTENCITKKFHKILQSQLDCVWHQLSTRTKEYIQDLKILRSMIINLIH
DDAVSFYALVSKYRTPEYAQINSGWILLESAEQLFKYAKARVFNKKNEFDPEPSPKWKYL
SDLLSQEIPDEVNKKKDSNLSNTKILILCQDNRTCSQLNHFLTMGANRYLLYTAFKREIP
INAVATKYEDIKNTVPIETKDKTDKKSDTKEGKSTDEGTRLNDSKDEELNTEESRTNYLL
TLTQTLAHCSKDNATVNESLFEPISQLDNLDFTKIEVETPVICIQTFKENGNNLSLEYTL
EALRPEYVILYHSDVAAVRQLEMYECRKKPEEPICKVYFLIHDQTVEEQAYLAALKREKQ
AFELLIQAKSVMVVPSYQDGKTDEYFQLTNEEEVQPTDSRKAGQNQSKEKPLVIVDMREF
RSDLPSLLHKRGINIEPVTIAIGDYILTPDICVERKSISDLIGSLNSGRLYTQCTQMCRN
YSRPILLIEFDQNKPFNLQGHFVVSTDISGADIQQKLQLLTIHFPRLKLVWSPSPYATAE
LFYELKQGRNNPNIAEAIALSGENTADDMNYERYNILVHDFVQKLPGVTSKNINRIMNKG
ISLDHLITLTKEELSEVVENKNEAETLYSILHVKARPMDAKEEKFGKKKFTGKLYRSKK
NT seq 2700 nt   +upstreamnt  +downstreamnt
atgaatgcaaaaattcaggaagatgaaaatgtagaaaacactgtttcgaatctaaagaat
aagtttcccatgttgtcattcgaaaagcaaatcttcattgatgtgtttgaaaaagatgct
cttgtaataatggcaaaaggccataattacaacaacattgtggctaatttgttgtgggtg
cacaaggatcctggtaatctagttttagttataaacagtaatgataacgaagaaaaatat
tttactgaaaaacttcagttgacaccagtacccacacttggcaatgaaagagagcggtcg
tatttagagggtggaattcattttgtatcaactcgtattttggttgtggatttattaaaa
aacagagtgccgatatcccatatcacaggcattgttgttctaagagcacacacagtctta
gaatcatgtcaggaagcatttgcattgagattgtacaggcagaaaaataagactggattt
attaaagcattttctaattcacctatctcgttcacgtttggataccatcaagttgagaaa
gttatgagggcactttttgtgacagaactattcctgtggccaaggtttcatggtaacatt
attagaaatttaaagagtagacaagctcaagctgaagaacttcacattccattaactact
aacatgagctacattcagacatgtcttcttgacattatgaactacactgtcaaacaattg
aagagcattaacaggtctttagatatgaaagaaatcacaaccgagaattgtataacaaag
aaatttcataagatcctgcaatcacagctggattgtgtgtggcatcaacttagtacaaga
acaaaggaatacatacaagacctaaaaattctcaggagcatgattattaacctaatacac
gatgacgcggtgtcgttttacgcgttagtcagcaagtaccgaactcctgaatacgcacaa
ataaattctggttggatcctgctcgagtctgcggagcagctgtttaaatacgccaaagca
cgtgtatttaataaaaagaatgaattcgatccggagccttcaccgaaatggaagtactta
agcgatttgttatctcaagaaataccagacgaagtaaacaaaaagaaagacagtaacttg
agcaacactaaaatattaattctctgtcaagacaatcggacctgtagccagctgaaccac
ttcctcaccatgggggcaaatagatacctgctgtacacagctttcaaacgtgagatcccc
ataaatgcagtagcgacaaaatatgaagacataaaaaacacagttcccatagaaactaaa
gataagacagacaaaaagtcggatacaaaagaaggcaaatctaccgatgaaggcacacgt
ttgaatgactcgaaagatgaagaattgaacacagaagaatcgagaactaattatctgttg
acgctaacacaaactttagcgcactgcagcaaagataatgcaacagttaatgaaagttta
ttcgaacccatttcccagctggataatttagattttacgaaaatcgaagtagaaacgccc
gtaatctgcatccaaacgttcaaagaaaacggtaacaatctctccttggaatacactctg
gaagctttgagaccggaatatgttatactgtatcacagcgacgtggcagctgtgcgccag
ctggaaatgtacgagtgcagaaagaaaccggaggagccgatctgcaaagtgtacttcctg
atacacgatcaaacagttgaggagcaagcctatctggcggcattgaagagagaaaaacaa
gcatttgaattgttgattcaggccaaaagtgtcatggtagttccttcatatcaagacgga
aaaacagatgaatacttccaattaacaaacgaggaagaagtgcaacccaccgattcaagg
aaagcaggtcaaaatcaaagtaaagagaaaccgctagtgatagtggacatgagagagttt
cgatcagacttaccctcgctgttgcacaagagaggcattaatatcgaaccagttacgata
gcgattggtgattacatactgactcctgatatttgcgtagaaaggaaatctatatccgat
ttgattggatcattgaactctggtcgcttgtacacacaatgcacacaaatgtgccgcaac
tacagtcgacctatcctgcttattgaatttgatcaaaataaaccttttaatcttcagggt
catttcgtggtatcaacagatatatctggagcggatatacaacaaaaactacaacttctg
acaatacatttccctaggctgaaattggtatggtcgccaagtccatatgctactgctgaa
cttttctatgaattaaagcaaggcagaaataatcccaatattgcagaagctatcgctctc
agtggtgaaaatacagcagatgatatgaactatgagagatacaatatattggttcatgat
ttcgtacaaaaactacctggtgttacatcaaaaaacattaacagaattatgaacaaaggt
atctcactggaccacttgataactcttaccaaagaggaattatctgaagtcgtagaaaac
aaaaatgaagccgaaacattgtattcaatacttcacgtcaaagctcgtcccatggatgcc
aaagaagagaaattcggaaagaaaaagttcactggaaaactatatcgtagtaaaaaataa

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