KEGG   Bombyx mandarina (wild silkworm): 114247028
Entry
114247028         CDS       T05882                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
bman  Bombyx mandarina (wild silkworm)
Pathway
bman03030  DNA replication
bman03410  Base excision repair
bman03420  Nucleotide excision repair
bman03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bman00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    114247028
   03410 Base excision repair
    114247028
   03420 Nucleotide excision repair
    114247028
   03430 Mismatch repair
    114247028
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bman03032]
    114247028
   03036 Chromosome and associated proteins [BR:bman03036]
    114247028
   03400 DNA repair and recombination proteins [BR:bman03400]
    114247028
DNA replication proteins [BR:bman03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    114247028
  DNA Replication Termination Factors
   ELG1-RFC complex
    114247028
Chromosome and associated proteins [BR:bman03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    114247028
DNA repair and recombination proteins [BR:bman03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     114247028
  Check point factors
   HRAD17(Rad24)-RFC complex
    114247028
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 Rad17 RuvB_N Viral_helicase1 RCF1-5-like_lid AAA_24 AAA_18 AAA_19 AAA_11 nSTAND3 Mg_chelatase MeaB IstB_IS21 RNA_helicase AAA_5 NTPase_1 AAA_assoc_2 MipZ AAA_25 ABC_tran AAA_3 AAA_23 AAA_28 AAA_30 CbiA bpMoxR
Other DBs
NCBI-GeneID: 114247028
NCBI-ProteinID: XP_028035628
UniProt: A0A6J2K1S9
LinkDB
Position
Unknown
AA seq 348 aa
MDDDDIVIMEVDEPEKKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG
NAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQK
VTLPPGRHKIVILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSRCAV
LRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNLQSTAQGFGHIS
PDNVFKVCDEPHPMVVRQMLEACTKQDIHEAYKVIAKLCKIGYAAEDIVSNIFRVCKTLD
ISEELKLAFIREIGLTHMRVADGLSSPLQLAGLLARMCRVAAGGDPEW
NT seq 1047 nt   +upstreamnt  +downstreamnt
atggatgatgatgatatcgtgataatggaagtagacgaaccggagaagaaacaagtaaaa
cctagttctagtaaatctacaaatttaccatggatagagaaatacaggccacaaactttc
gacgatattgtcggcaatgaagacactgtgtcccgcttagccgtctttgctaaaaccggc
aatgctcctaacattattatagctggacctcctggtgttggaaagacgacgactatacta
tgcttagcgcgagctctcctcggagtatcattcaaagacgccgtattagaactaaacgcc
tcaaatgatcgtggtatagatgtcgtccggaataagataaaaatgtttgcgcaacaaaag
gttactttgccacctggtcgacataaaatagtgatactagatgaagcggacagcatgact
gacggagctcaacaagcattaagacgcaccatggagctgtattccagtacaactcgtttt
gcattagcagccaataatagtgagaagataatagaacccatacaatctaggtgtgctgta
ctccggtactccaggcttagtgatgcacagatactagcaaaggttatagagatctgcaat
aaagaaaacctatcatacactgaagaaggtgtgagtgcagtagtcttcacagcacagggg
gacttgcgatcagccctgaacaacctgcagtcaacagcccagggttttggtcacatcagc
ccggacaatgtgttcaaagtgtgtgatgaaccacatccgatggtggtcaggcagatgctt
gaagcttgcactaaacaggatatacatgaggcttacaaggttatagcaaaactctgcaag
attggctacgcagcagaggacatagtcagtaacatattcagagtttgcaaaactttagat
atatctgaagagttaaaactggctttcatcagagagattggtttgacacacatgagggta
gcagatggtctttcgtctcccctgcagctggccggtctcctcgccaggatgtgcagggtg
gctgccggcggtgacccggagtggtga

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