Bombyx mandarina (wild silkworm): 114247028
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Entry
114247028 CDS
T05882
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03030
DNA replication
bman03410
Base excision repair
bman03420
Nucleotide excision repair
bman03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114247028
03410 Base excision repair
114247028
03420 Nucleotide excision repair
114247028
03430 Mismatch repair
114247028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bman03032
]
114247028
03036 Chromosome and associated proteins [BR:
bman03036
]
114247028
03400 DNA repair and recombination proteins [BR:
bman03400
]
114247028
DNA replication proteins [BR:
bman03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114247028
DNA Replication Termination Factors
ELG1-RFC complex
114247028
Chromosome and associated proteins [BR:
bman03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
114247028
DNA repair and recombination proteins [BR:
bman03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114247028
Check point factors
HRAD17(Rad24)-RFC complex
114247028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
Rad17
RuvB_N
Viral_helicase1
RCF1-5-like_lid
AAA_24
AAA_18
AAA_19
AAA_11
nSTAND3
Mg_chelatase
MeaB
IstB_IS21
RNA_helicase
AAA_5
NTPase_1
AAA_assoc_2
MipZ
AAA_25
ABC_tran
AAA_3
AAA_23
AAA_28
AAA_30
CbiA
bpMoxR
Motif
Other DBs
NCBI-GeneID:
114247028
NCBI-ProteinID:
XP_028035628
UniProt:
A0A6J2K1S9
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MDDDDIVIMEVDEPEKKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTG
NAPNIIIAGPPGVGKTTTILCLARALLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQK
VTLPPGRHKIVILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSRCAV
LRYSRLSDAQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNLQSTAQGFGHIS
PDNVFKVCDEPHPMVVRQMLEACTKQDIHEAYKVIAKLCKIGYAAEDIVSNIFRVCKTLD
ISEELKLAFIREIGLTHMRVADGLSSPLQLAGLLARMCRVAAGGDPEW
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatgatatcgtgataatggaagtagacgaaccggagaagaaacaagtaaaa
cctagttctagtaaatctacaaatttaccatggatagagaaatacaggccacaaactttc
gacgatattgtcggcaatgaagacactgtgtcccgcttagccgtctttgctaaaaccggc
aatgctcctaacattattatagctggacctcctggtgttggaaagacgacgactatacta
tgcttagcgcgagctctcctcggagtatcattcaaagacgccgtattagaactaaacgcc
tcaaatgatcgtggtatagatgtcgtccggaataagataaaaatgtttgcgcaacaaaag
gttactttgccacctggtcgacataaaatagtgatactagatgaagcggacagcatgact
gacggagctcaacaagcattaagacgcaccatggagctgtattccagtacaactcgtttt
gcattagcagccaataatagtgagaagataatagaacccatacaatctaggtgtgctgta
ctccggtactccaggcttagtgatgcacagatactagcaaaggttatagagatctgcaat
aaagaaaacctatcatacactgaagaaggtgtgagtgcagtagtcttcacagcacagggg
gacttgcgatcagccctgaacaacctgcagtcaacagcccagggttttggtcacatcagc
ccggacaatgtgttcaaagtgtgtgatgaaccacatccgatggtggtcaggcagatgctt
gaagcttgcactaaacaggatatacatgaggcttacaaggttatagcaaaactctgcaag
attggctacgcagcagaggacatagtcagtaacatattcagagtttgcaaaactttagat
atatctgaagagttaaaactggctttcatcagagagattggtttgacacacatgagggta
gcagatggtctttcgtctcccctgcagctggccggtctcctcgccaggatgtgcagggtg
gctgccggcggtgacccggagtggtga
DBGET
integrated database retrieval system