Bombyx mandarina (wild silkworm): 114247062
Help
Entry
114247062 CDS
T05882
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114247062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bman03021
]
114247062
03019 Messenger RNA biogenesis [BR:
bman03019
]
114247062
Transcription machinery [BR:
bman03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
114247062
RNA polymerase I system
114247062
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
114247062
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW
KOW4_SPT5
KOW5_SPT5
Spt5-NGN
KOW7_SPT5
KOW2_Spt5
KOWx_SPT5
KOW6_SPT5
Spt5_N
CTD
GPKOW_C
SH3_KIN17_C
DUF3984
DUF3912
Ribonuc_P_40
TIGD5_C
Motif
Other DBs
NCBI-GeneID:
114247062
NCBI-ProteinID:
XP_028035690
UniProt:
A0A6J2K1D0
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MSDSEGSNYSGSGSEAGSVVSKQSHRSAASNRSARSRSISRSRSRSRSGSRSPSRTPSRS
RSRSRSRSRSVGSDTSKNRDDEAKEASGDEEVEDEQEPEGEDLVDSEEYEEDEEEERLRK
KRKKDSRYGGFIIDEAEVDDEVDEDDEWEEGAQEMGIVGNEVDEIGPTAREIEGRRRGTN
LWDSQKEEEIEEYLRNKYADESAALRHFGEGGEEMSDEITQQTLLPGIKDPNLWMVRCRI
GEEKATVLLLMRKFIAFQFSEEPFLIKSVVAPEGVKGYVYIEAFKQTHVKNIIDKVGTLK
SGVWKQEMVPIKEMTDVLRVVKKQSGLKPKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLK
LLPRIDYTRLRGALRTVQSDSEAAKRKKKRRPPAKPFDPEAIRAIGGEVTSDGDFLIFEG
NRYSRKGFLYKNFTMSAILSEGVKPSLTELERFEEQPEGIDIELAAPAKDDPAGLHSFSM
GDNVEVCTGDLANLQARITAIDGSMITVMPKHDGLKDPIVFHPNELRKYFKMGDHVKVVA
GRYEGDTGLIVRVEPHRVVLVSDLTMHELEVLPRDLQLCSDMATGVDSLGQFQWGDMVQL
DPQTVGVIVRLEKENFHVLGMQGKVIECKPQALQKRRENRFTVALDSEENTIQKRDIVKV
IDGPHAGRDGEIKHLYRNFAFLQSHMYLDNGGIFVCKTRHLQLAGGARGNNATAAGLTLG
FMSPRIASPAHPGAGRGGSTPRGRGGRGGGGGRGVTRDRELIGQTIKITGGPYKGNVGIV
KDATGSTARVELHSSCQTISVDRGHIAGAGAGAATGGASSYSRTPSRTPAAGAATPTYRD
TGIKTPMHGAATPVYEVGSRTPHYGSSTPAHEGSRTPAHGAWDPSGAATPARPDFDYEPD
AYGAGPFTPQTPGAMYGSDHTYSPYSPGRSEGESAEAGAWAAPELVVRLRAGAADGLAAQ
TAVVRATGGGSCALYLPAEERVVSVPPDLLEPVLPQAGERVKVIAGEDRDAVGQLISIEN
QEGVVKFGTDDIKIMQLRHLCKMAS
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattcggaaggtagtaactattcggggagtgggtccgaggcaggcagtgttgta
tcaaaacaatcacatcgcagcgctgcatcgaatcggtcggcaagatcgcgttctatctct
cgatcaaggtccaggtcgcgttctggaagccgtagcccctctaggactccatcccgctca
cgatctaggtctcgctctagaagtcgttcagtaggttcagatacaagtaaaaatagagat
gatgaagccaaagaagcatctggcgatgaagaagtggaggatgaacaagagcccgaaggt
gaggatttggtggattctgaggagtatgaagaagacgaagaagaggagaggctgaggaag
aaaagaaaaaaggacagtcgttatggtggattcattattgacgaagctgaggtggatgat
gaagttgatgaagatgacgaatgggaagagggagcccaagaaatgggtattgtaggaaat
gaagtagatgaaattgggccaacagctagagaaattgaaggtcgaagaagaggcactaac
ctttgggattcacagaaagaggaggagattgaagaatatcttcgaaataagtatgcagat
gaatcagcagccctcagacactttggtgaaggtggagaagagatgtctgatgaaataact
cagcaaactctactgcctggtatcaaggatccaaatttgtggatggtcagatgtaggatt
ggagaagagaaggctactgttttacttttgatgcgaaaatttattgctttccaattctcg
gaagaaccttttttgataaagtcagttgtagcaccagaaggagtcaaaggctatgtgtac
atagaggctttcaagcagacacatgttaaaaacattatagacaaagtgggaacccttaag
tctggagtgtggaaacaagaaatggtgcctattaaggaaatgactgatgttctcagagta
gtcaaaaagcaatcaggacttaaacctaaacaatgggtcagattaaaacgaggtttatac
aaagatgatattgctcaagttgactatgtagacttggcacagaatcaagtgcatttgaaa
ctacttcctagaatagattatacaagactgagaggagctttaagaacagtacagagcgat
agtgaagcagcaaagcgaaagaaaaagagaaggcctcctgctaaaccctttgatccagag
gcaatccgagcgatcggtggagaagttacttccgatggtgatttcctcatatttgagggc
aataggtactctaggaaaggatttctgtataaaaactttacaatgtcggcgatactgtca
gaaggtgtcaagccttcacttacagagttggaaagatttgaagagcaaccagaaggtatc
gatattgagttggctgctcccgccaaggacgaccctgccggcttgcattccttctccatg
ggtgacaatgtggaagtctgtactggagatcttgcgaacttgcaggcccgcatcactgcg
atcgacggttcgatgatcactgtcatgccaaaacacgatggtcttaaggacccaattgtc
ttccatccgaatgagttgcgcaagtacttcaaaatgggtgatcacgtgaaagtggtggct
gggcgttacgagggcgacacaggcctcatagtgcgcgtcgaaccgcacagggtcgtgctt
gtttccgacctcaccatgcacgagcttgaggtgctgccccgtgacctacagctctgttca
gacatggcgactggcgttgactccctcggacagttccagtggggagacatggtgcaactg
gatccacagaccgtcggagttatcgtgcgcctcgagaaagagaacttccacgtgctcggc
atgcaaggcaaggtcatcgagtgcaagccgcaagcgctacagaaacgccgcgagaaccgg
tttacagtcgcgctcgattccgaggagaacacgattcagaagcgcgacatcgttaaagta
atcgacgggccgcatgccggacgcgacggtgaaatcaaacatctctaccggaacttcgcc
ttcctccagtcgcacatgtacctcgacaacggcggcatctttgtgtgcaagacgcgccac
ctgcagctggccggtggagccaggggaaataatgccaccgccgccggactcacgctcggc
ttcatgtcgccgcggatagcttctcctgcacacccaggggccggcaggggaggctccacc
cctcgcggccgtgggggccgaggcggcggcggaggtcgaggcgtcactcgggatcgcgag
ctcattggccaaaccattaagatcacggggggaccatacaagggaaacgtcgggatcgtc
aaagacgcgaccggcagcaccgcgcgcgtcgagctgcactcctcctgtcagaccatctcc
gtggaccgcggccacatcgccggggcgggggccggagctgcgaccggcggggcctcgtcc
tactcgcgcacgccgtcccgcacgccggccgccggcgccgctacccccacgtaccgcgac
acgggcatcaagacgcctatgcacggcgccgctacacccgtctacgaggtgggctcgcgc
acgccgcactacgggtcgtcgaccccggcgcacgaggggtcgcgcacgccggcgcacggg
gcctgggacccgagcggtgccgccaccccggcgcgaccggacttcgactacgagccggac
gcgtacggcgcgggaccgttcactccgcagacgccgggcgccatgtacggctcggaccac
acgtacagcccgtacagtccgggccggtcggagggcgagtcggcggaggcgggtgcgtgg
gcggcaccagagctcgtggtgcgtctgagagcgggagctgcggacggtctggccgcacag
accgcggtggtccgtgcgaccggcgggggctcgtgcgcgttgtacttaccggcggaggag
cgagtggtgtccgtgccgccggacttgttagagccggtgctgcctcaggcgggagagcgc
gtgaaggtgatcgcgggagaggaccgggacgcggtcggacaacttatctccatcgaaaac
caagagggagtcgtcaaattcggcaccgacgacatcaaaatcatgcaactacgtcatctt
tgcaagatggcctcttaa
DBGET
integrated database retrieval system
