Bombyx mandarina (wild silkworm): 114247242
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Entry
114247242 CDS
T05882
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114247242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114247242
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114247242
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114247242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
114247242
NCBI-ProteinID:
XP_028035930
UniProt:
A0A6J2K210
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MAATRKLQGEIERCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLEFRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEMSSWLISSIDALNLQVDQFESEVESLLVGKKKRLDKEKQDRMEELKLKLEKHRFHIK
KLETLLRMLDNMSVEVEQTNFSYPRPASDESLETRGNLRKYYVKLQIKGIKEDVEYYIDS
SLEPGFEENDYIYDDIQGLDEIELSGVGPSTDSNNSNGSAATPNSILSGTSPVRTPTSEN
HNHSTDSIDIEKKKKEEIIPKPVKPLPLRAVNASVVGNSTCNVSSLLNNSAAASNSTGVS
GASTPSKPAPSPPPRPANSTEVVENGPVSITAAVNTTTTHLPPPPTQQPPPTSRSTSSSG
GASASVTTSPLTVNGPPPSAHHTPHHALNNGRVSETSSMSAVSASSATSASSAAHNTASL
KSMAQEAVHRAGLDLHHQNTRRSTAIAQAHIPPLLGVAPLGPQPLDSGHQVQFQMMESAF
YHMPHPSDSERTRVYLPRNICRTPEYYNQVLLPHSDTVEFFQRLSTETLFFVFYYMEGTK
AQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDYEKWGQRKKEGFTF
EYKYLEDRDLN
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaaggaaattacaaggcgaaatagaacgttgtttaaaaaaagtaacagaa
ggagttgaaacttttgaggacatctggcagaaagttcacaatgcgacgaacagtaatcaa
aaggaaaaatacgaggcggaccttaagaaggagatcaagaaactgcagaggctacgcgat
cagatcaagtcgtggattgcctctggggagattaaagataagagtacactattagaattt
aggaaacttattgaaacacaaatggagaggtttaaagttgtggaaagggaaacgaaaacg
aaggcatactcaaaagaagggcttggggcggcacagaaactcgatcctgctcagaaggaa
agagaagaaatgtcatcatggctcatctcgtccatagacgctctaaatttacaggttgat
caatttgagtctgaagtagaatcactattagtgggtaagaagaaaagactagacaaagag
aaacaggacagaatggaggagctcaaactgaaactggaaaaacacaggtttcacataaaa
aaacttgaaacgctactaaggatgctggataacatgtctgttgaagttgaacagacgaat
ttcagttaccctcgtccagcaagcgatgaaagcttagagactcgcggcaaccttagaaaa
tactatgtaaaattgcagataaaaggtataaaggaagacgtggaatattacatagactca
tctctagagccggggttcgaggagaacgactacatatacgacgatatccaagggctggac
gagatcgagctcagcggtgtaggaccgtccaccgattccaacaacagcaatggctccgct
gcaactcccaacagtatactctctggcacgagtcctgtaagaacaccaacgtcagaaaac
cacaatcattcgacagattcaatagacatagaaaagaaaaagaaagaagagattatacct
aaaccggtaaaaccactgccgctccgtgcggtgaacgccagcgtggtcggtaatagcacg
tgtaacgttagttccttgctcaataactccgcagccgcaagcaatagtacgggcgtgtct
ggcgcgtccacgccgagcaagcccgcgcccagcccgccgccgcgacccgctaacagcaca
gaagtagtcgagaatggtccagtatcaatcacagcagcggtcaacacgacgacgacgcat
ctaccgcctccccccacgcagcaaccacccccaacgtcgcggagtacatcgtcgagtggc
ggcgccagcgcgagcgtgacgacgtcccccctcaccgtcaacggcccccctccctccgcg
caccacacgccgcaccacgcgctcaacaatggacgagtgagcgagacgtcgagcatgtcg
gcggtgagcgcgtcgagtgccacgagcgcgagcagtgcggcgcacaacaccgcctcgctc
aagagcatggcgcaggaggccgtgcaccgcgccggtctggacctgcaccaccagaacacg
agacggagtacggcaatagcgcaagcgcacattccgccactattaggagtcgcgccctta
ggaccgcagccacttgactcgggccatcaagtacagttccagatgatggagtcagcgttc
tatcacatgccccacccttcagactcggaacgtacaagggtctacttgcctaggaacatt
tgtcggactcctgaatattacaatcaggtgttattaccccattcggacacggtagagttc
ttccagcggttgtcgacggagacgttgttcttcgtgttctactacatggagggaacgaaa
gcgcagtacctcgcagcgaaagcgctcaaaaaacaaagctggcgcttccatactaaatac
atgatgtggttccagaggcacgaggaaccaaaagtcatcaatgaggaatatgaacagggc
acatacatctatttcgactacgagaagtggggccagcgcaaaaaggagggcttcacgttc
gagtacaagtacttagaggaccgagacttgaattga
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